RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 RBM27Q9P2N5 1060 aaKnown RBP19.46■□□□□ 0.7
VARS2-212ENST00000542001 RBM10P98175 930 aaKnown RBP19.45■□□□□ 0.7
VARS2-212ENST00000542001 AACSQ86V21 672 aa19.45■□□□□ 0.7
VARS2-212ENST00000542001 STRN4Q9NRL3 753 aa19.45■□□□□ 0.7
VARS2-212ENST00000542001 ISY1Q9ULR0 285 aaKnown RBP19.45■□□□□ 0.7
VARS2-212ENST00000542001 PLEKHO1Q53GL0 409 aaPredicted RBP19.45■□□□□ 0.7
VARS2-212ENST00000542001 BLMP54132 1417 aaPredicted RBP19.44■□□□□ 0.7
VARS2-212ENST00000542001 STK11IPQ8N1F8 1099 aa19.44■□□□□ 0.7
VARS2-212ENST00000542001 CCDC8Q9H0W5 538 aaPredicted RBP19.44■□□□□ 0.7
VARS2-212ENST00000542001 PTPRTO14522 1441 aa19.44■□□□□ 0.7
VARS2-212ENST00000542001 ZMYM4Q5VZL5 1548 aa19.43■□□□□ 0.7
VARS2-212ENST00000542001 PHF14O94880 888 aa19.43■□□□□ 0.7
VARS2-212ENST00000542001 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.43■□□□□ 0.7
VARS2-212ENST00000542001 ZNF592Q92610 1267 aa19.43■□□□□ 0.7
VARS2-212ENST00000542001 XRCC6P12956 609 aaKnown RBP eCLIP19.42■□□□□ 0.7
VARS2-212ENST00000542001 MTHFSDQ2M296 383 aaKnown RBP19.42■□□□□ 0.7
VARS2-212ENST00000542001 WASHC4Q2M389 1173 aa19.42■□□□□ 0.7
VARS2-212ENST00000542001 SMC5Q8IY18 1101 aa19.42■□□□□ 0.7
VARS2-212ENST00000542001 PI4KAP2A4QPH2 592 aa19.42■□□□□ 0.7
VARS2-212ENST00000542001 PI4KAP1Q8N8J0 262 aa19.42■□□□□ 0.7
VARS2-212ENST00000542001 SPC24Q8NBT2 197 aa19.42■□□□□ 0.7
VARS2-212ENST00000542001 JAKMIP1Q96N16 626 aaKnown RBP19.42■□□□□ 0.7
VARS2-212ENST00000542001 BOLA2Q9H3K6 86 aa19.42■□□□□ 0.7
VARS2-212ENST00000542001 TTC21BQ7Z4L5 1316 aa19.42■□□□□ 0.7
VARS2-212ENST00000542001 ESPNB1AK53 854 aa19.41■□□□□ 0.7
VARS2-212ENST00000542001 PTCD1O75127 700 aaKnown RBP19.41■□□□□ 0.7
VARS2-212ENST00000542001 ATF3P18847 181 aa19.41■□□□□ 0.7
VARS2-212ENST00000542001 TCEANC2Q96MN5 208 aa19.41■□□□□ 0.7
VARS2-212ENST00000542001 ABCC2Q92887 1545 aa19.41■□□□□ 0.7
VARS2-212ENST00000542001 ATP6V1DQ9Y5K8 247 aa19.41■□□□□ 0.7
VARS2-212ENST00000542001 HSP90AB4PQ58FF6 505 aa19.41■□□□□ 0.7
VARS2-212ENST00000542001 ZBTB7BO15156 539 aaPredicted RBP19.4■□□□□ 0.7
VARS2-212ENST00000542001 SAMD9LQ8IVG5 1584 aa19.4■□□□□ 0.7
VARS2-212ENST00000542001 ZNF521Q96K83 1311 aa19.4■□□□□ 0.7
VARS2-212ENST00000542001 PPIP5K1Q6PFW1 1433 aa19.39■□□□□ 0.7
VARS2-212ENST00000542001 ZGPATQ8N5A5 531 aaKnown RBP19.39■□□□□ 0.69
VARS2-212ENST00000542001 TTC22Q5TAA0 569 aa19.39■□□□□ 0.69
VARS2-212ENST00000542001 LRRC59Q96AG4 307 aaKnown RBP19.39■□□□□ 0.69
VARS2-212ENST00000542001 PPP1R42Q7Z4L9 355 aa19.39■□□□□ 0.69
VARS2-212ENST00000542001 BECN2A8MW95 431 aa19.38■□□□□ 0.69
VARS2-212ENST00000542001 CASTP20810 708 aaKnown RBP19.38■□□□□ 0.69
VARS2-212ENST00000542001 GTF2E1P29083 439 aaPredicted RBP19.38■□□□□ 0.69
VARS2-212ENST00000542001 ATP10AO60312 1499 aa19.38■□□□□ 0.69
VARS2-212ENST00000542001 PRPF40BQ6NWY9 871 aaKnown RBP19.38■□□□□ 0.69
VARS2-212ENST00000542001 CCDC83Q8IWF9 413 aa19.38■□□□□ 0.69
VARS2-212ENST00000542001 ZNF518AQ6AHZ1 1483 aa19.38■□□□□ 0.69
VARS2-212ENST00000542001 NSD2O96028 1365 aa19.37■□□□□ 0.69
VARS2-212ENST00000542001 ERCC6L2Q5T890 1561 aa19.37■□□□□ 0.69
VARS2-212ENST00000542001 DDX11Q96FC9 970 aa19.37■□□□□ 0.69
VARS2-212ENST00000542001 BAG4O95429 457 aaKnown RBP19.37■□□□□ 0.69
VARS2-212ENST00000542001 RNF20Q5VTR2 975 aa19.37■□□□□ 0.69
VARS2-212ENST00000542001 CHAMP1Q96JM3 812 aa19.37■□□□□ 0.69
VARS2-212ENST00000542001 IL16Q14005 1332 aa19.37■□□□□ 0.69
VARS2-212ENST00000542001 CSPP1Q1MSJ5 1256 aa19.36■□□□□ 0.69
VARS2-212ENST00000542001 FMNL2Q96PY5 1086 aa19.36■□□□□ 0.69
VARS2-212ENST00000542001 GOLGA6L6A8MZA4 724 aa19.36■□□□□ 0.69
VARS2-212ENST00000542001 SLC39A6Q13433 755 aa19.36■□□□□ 0.69
VARS2-212ENST00000542001 PHF8Q9UPP1 1060 aa19.36■□□□□ 0.69
VARS2-212ENST00000542001 MAST1Q9Y2H9 1570 aa19.35■□□□□ 0.69
VARS2-212ENST00000542001 CHMP4CQ96CF2 233 aa19.35■□□□□ 0.69
VARS2-212ENST00000542001 KAT6BQ8WYB5 2073 aa19.35■□□□□ 0.69
VARS2-212ENST00000542001 NPATQ14207 1427 aa19.35■□□□□ 0.69
VARS2-212ENST00000542001 PLEKHM2Q8IWE5 1019 aa19.35■□□□□ 0.69
VARS2-212ENST00000542001 GOLGA6L19H0YKK7 550 aa19.35■□□□□ 0.69
VARS2-212ENST00000542001 CPLX1O14810 134 aa19.35■□□□□ 0.69
VARS2-212ENST00000542001 HTATSF1O43719 755 aaKnown RBP19.35■□□□□ 0.69
VARS2-212ENST00000542001 ATP2B1P20020 1258 aa19.35■□□□□ 0.69
VARS2-212ENST00000542001 EYA1Q99502 592 aa19.35■□□□□ 0.69
VARS2-212ENST00000542001 PHAXQ9H814 394 aaKnown RBP19.35■□□□□ 0.69
VARS2-212ENST00000542001 CIZ1Q9ULV3 898 aaPredicted RBP19.35■□□□□ 0.69
VARS2-212ENST00000542001 TRMT2AQ8IZ69 625 aaKnown RBP19.34■□□□□ 0.69
VARS2-212ENST00000542001 ATP5J2-PTCD1G3V325 749 aa19.34■□□□□ 0.69
VARS2-212ENST00000542001 CHRNA2Q15822 529 aa19.34■□□□□ 0.69
VARS2-212ENST00000542001 ANKRD44Q8N8A2 993 aa19.34■□□□□ 0.69
VARS2-212ENST00000542001 TTC37Q6PGP7 1564 aa19.34■□□□□ 0.69
VARS2-212ENST00000542001 PA2G4Q9UQ80 394 aaKnown RBP19.34■□□□□ 0.69
VARS2-212ENST00000542001 PDE1AP54750 535 aa19.33■□□□□ 0.69
VARS2-212ENST00000542001 IL13P35225 146 aa19.33■□□□□ 0.68
VARS2-212ENST00000542001 CHPF2Q9P2E5 772 aa19.33■□□□□ 0.68
VARS2-212ENST00000542001 CYP46A1Q9Y6A2 500 aa19.33■□□□□ 0.68
VARS2-212ENST00000542001 MAP3K19Q56UN5 1328 aa19.33■□□□□ 0.68
VARS2-212ENST00000542001 LRRIQ1Q96JM4 1722 aa19.33■□□□□ 0.68
VARS2-212ENST00000542001 YTHDC2Q9H6S0 1430 aaKnown RBP19.33■□□□□ 0.68
VARS2-212ENST00000542001 CAMK4Q16566 473 aa19.33■□□□□ 0.68
VARS2-212ENST00000542001 CEP85Q6P2H3 762 aa19.33■□□□□ 0.68
VARS2-212ENST00000542001 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.33■□□□□ 0.68
VARS2-212ENST00000542001 ABCA8O94911 1581 aa19.33■□□□□ 0.68
VARS2-212ENST00000542001 EIF2AK4Q9P2K8 1649 aaKnown RBP19.33■□□□□ 0.68
VARS2-212ENST00000542001 LARP1BQ659C4 914 aaKnown RBP19.32■□□□□ 0.68
VARS2-212ENST00000542001 NRDCO43847 1150 aa19.32■□□□□ 0.68
VARS2-212ENST00000542001 ANKLE2Q86XL3 938 aa19.32■□□□□ 0.68
VARS2-212ENST00000542001 DNAAF4Q8WXU2 420 aa19.32■□□□□ 0.68
VARS2-212ENST00000542001 ERVK-7P63135 1459 aa19.32■□□□□ 0.68
VARS2-212ENST00000542001 ATP7AQ04656 1500 aa19.32■□□□□ 0.68
VARS2-212ENST00000542001 CPA1P15085 419 aa19.32■□□□□ 0.68
VARS2-212ENST00000542001 FKBP4Q02790 459 aaKnown RBP eCLIP19.31■□□□□ 0.68
VARS2-212ENST00000542001 TSPY26PQ9H489 355 aa19.31■□□□□ 0.68
VARS2-212ENST00000542001 CWC22Q9HCG8 908 aaKnown RBP19.31■□□□□ 0.68
VARS2-212ENST00000542001 TATP17735 454 aaPredicted RBP19.3■□□□□ 0.68
VARS2-212ENST00000542001 RIMS2Q9UQ26 1411 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms