RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 GLI3P10071 1580 aa36.56■■■■□ 3.44
CCM2-218ENST00000541586 NGEFQ8N5V2 710 aa36.54■■■■□ 3.44
CCM2-218ENST00000541586 PLEKHF1Q96S99 279 aa36.54■■■■□ 3.44
CCM2-218ENST00000541586 ZNF521Q96K83 1311 aa36.54■■■■□ 3.44
CCM2-218ENST00000541586 TATP17735 454 aaPredicted RBP36.54■■■■□ 3.44
CCM2-218ENST00000541586 FCHSD2O94868 740 aa36.51■■■■□ 3.44
CCM2-218ENST00000541586 RGPD1P0DJD0 1748 aa36.51■■■■□ 3.44
CCM2-218ENST00000541586 SEPT12Q8IYM1 358 aa36.51■■■■□ 3.43
CCM2-218ENST00000541586 PNNQ9H307 717 aaKnown RBP36.5■■■■□ 3.43
CCM2-218ENST00000541586 PRKAR2BP31323 418 aa36.49■■■■□ 3.43
CCM2-218ENST00000541586 CDCA7Q9BWT1 371 aaPredicted RBP36.49■■■■□ 3.43
CCM2-218ENST00000541586 RSPH6AQ9H0K4 717 aa36.49■■■■□ 3.43
CCM2-218ENST00000541586 NCAPD2Q15021 1401 aa36.49■■■■□ 3.43
CCM2-218ENST00000541586 ONECUT3O60422 494 aaPredicted RBP36.48■■■■□ 3.43
CCM2-218ENST00000541586 CDCA7LQ96GN5 454 aa36.48■■■■□ 3.43
CCM2-218ENST00000541586 KDRP35968 1356 aa36.48■■■■□ 3.43
CCM2-218ENST00000541586 MEGF6O75095 1541 aa36.47■■■■□ 3.43
CCM2-218ENST00000541586 EXOC5O00471 708 aa36.47■■■■□ 3.43
CCM2-218ENST00000541586 RRP7AQ9Y3A4 280 aaKnown RBP36.46■■■■□ 3.43
CCM2-218ENST00000541586 DDB1Q16531 1140 aa36.45■■■■□ 3.43
CCM2-218ENST00000541586 MAPK8IP3Q9UPT6 1336 aa36.44■■■■□ 3.42
CCM2-218ENST00000541586 DISP2A7MBM2 1401 aa36.44■■■■□ 3.42
CCM2-218ENST00000541586 NEUROD2Q15784 382 aa36.43■■■■□ 3.42
CCM2-218ENST00000541586 ZCRB1Q8TBF4 217 aaKnown RBP36.43■■■■□ 3.42
CCM2-218ENST00000541586 GOLGA2Q08379 1002 aa36.41■■■■□ 3.42
CCM2-218ENST00000541586 NCBP3Q53F19 620 aaKnown RBP36.41■■■■□ 3.42
CCM2-218ENST00000541586 DDX54Q8TDD1 881 aaKnown RBP36.41■■■■□ 3.42
CCM2-218ENST00000541586 PHACTR3Q96KR7 559 aa36.41■■■■□ 3.42
CCM2-218ENST00000541586 NEFMP07197 916 aa36.4■■■■□ 3.42
CCM2-218ENST00000541586 WWC1Q8IX03 1113 aa36.4■■■■□ 3.42
CCM2-218ENST00000541586 PLEKHO1Q53GL0 409 aaPredicted RBP36.39■■■■□ 3.42
CCM2-218ENST00000541586 SPG7Q9UQ90 795 aa36.39■■■■□ 3.42
CCM2-218ENST00000541586 OVOS2A0A0G2JMS6 1433 aa36.39■■■■□ 3.42
CCM2-218ENST00000541586 CCDC27Q2M243 656 aa36.38■■■■□ 3.41
CCM2-218ENST00000541586 TMPOP42166 694 aaKnown RBP36.37■■■■□ 3.41
CCM2-218ENST00000541586 SUPT16HQ9Y5B9 1047 aaKnown RBP36.37■■■■□ 3.41
CCM2-218ENST00000541586 AMOTQ4VCS5 1084 aa36.37■■■■□ 3.41
CCM2-218ENST00000541586 RGS12O14924 1447 aa36.35■■■■□ 3.41
CCM2-218ENST00000541586 MTHFSDQ2M296 383 aaKnown RBP36.34■■■■□ 3.41
CCM2-218ENST00000541586 WNK3Q9BYP7 1800 aa36.34■■■■□ 3.41
CCM2-218ENST00000541586 PARP4Q9UKK3 1724 aaKnown RBP36.33■■■■□ 3.41
CCM2-218ENST00000541586 FAM182BQ5T319 152 aa36.33■■■■□ 3.41
CCM2-218ENST00000541586 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP36.33■■■■□ 3.41
CCM2-218ENST00000541586 THSD7AQ9UPZ6 1657 aa36.32■■■■□ 3.41
CCM2-218ENST00000541586 SLFN5Q08AF3 891 aa36.32■■■■□ 3.4
CCM2-218ENST00000541586 ZNF530Q6P9A1 599 aaPredicted RBP36.32■■■■□ 3.4
CCM2-218ENST00000541586 KRT27Q7Z3Y8 459 aa36.31■■■■□ 3.4
CCM2-218ENST00000541586 MARCH10Q8NA82 808 aaPredicted RBP36.3■■■■□ 3.4
CCM2-218ENST00000541586 SPINK5Q9NQ38 1064 aaPredicted RBP36.3■■■■□ 3.4
CCM2-218ENST00000541586 TNS2Q63HR2 1409 aa36.29■■■■□ 3.4
CCM2-218ENST00000541586 CYP27B1O15528 508 aa36.29■■■■□ 3.4
CCM2-218ENST00000541586 DUSP27Q5VZP5 1158 aa36.29■■■■□ 3.4
CCM2-218ENST00000541586 PCDH11XQ9BZA7 1347 aa36.29■■■■□ 3.4
CCM2-218ENST00000541586 PCDH11YQ9BZA8 1340 aa36.29■■■■□ 3.4
CCM2-218ENST00000541586 RIPK4P57078 832 aa36.28■■■■□ 3.4
CCM2-218ENST00000541586 C1orf141Q5JVX7 400 aa36.28■■■■□ 3.4
CCM2-218ENST00000541586 TRMT2AQ8IZ69 625 aaKnown RBP36.28■■■■□ 3.4
CCM2-218ENST00000541586 LRRC37A3O60309 1634 aa36.27■■■■□ 3.4
CCM2-218ENST00000541586 E9PSI1 815 aa36.27■■■■□ 3.4
CCM2-218ENST00000541586 WDR63Q8IWG1 891 aa36.27■■■■□ 3.4
CCM2-218ENST00000541586 IFNL2Q8IZJ0 200 aa36.27■■■■□ 3.4
CCM2-218ENST00000541586 GAS2L2Q8NHY3 880 aa36.27■■■■□ 3.4
CCM2-218ENST00000541586 TRIM35Q9UPQ4 493 aa36.27■■■■□ 3.4
CCM2-218ENST00000541586 NFE2L2Q16236 605 aa36.25■■■■□ 3.39
CCM2-218ENST00000541586 PHKG2P15735 406 aa36.25■■■■□ 3.39
CCM2-218ENST00000541586 BRWD3Q6RI45 1802 aa36.23■■■■□ 3.39
CCM2-218ENST00000541586 AKAP4Q5JQC9 854 aa36.21■■■■□ 3.39
CCM2-218ENST00000541586 PLEKHG2Q9H7P9 1386 aa36.21■■■■□ 3.39
CCM2-218ENST00000541586 NEFLP07196 543 aa36.2■■■■□ 3.39
CCM2-218ENST00000541586 PKD1L3Q7Z443 1732 aa36.2■■■■□ 3.39
CCM2-218ENST00000541586 MPRIPQ6WCQ1 1025 aa36.19■■■■□ 3.38
CCM2-218ENST00000541586 RCAN3Q9UKA8 241 aa36.17■■■■□ 3.38
CCM2-218ENST00000541586 GNAT3A8MTJ3 354 aa36.17■■■■□ 3.38
CCM2-218ENST00000541586 SHANK3Q9BYB0 1731 aa36.16■■■■□ 3.38
CCM2-218ENST00000541586 FKBP8Q14318 412 aa36.15■■■■□ 3.38
CCM2-218ENST00000541586 ACSBG1Q96GR2 724 aa36.15■■■■□ 3.38
CCM2-218ENST00000541586 HSP90AB1P08238 724 aaKnown RBP36.14■■■■□ 3.38
CCM2-218ENST00000541586 RTF1Q92541 710 aaKnown RBP36.14■■■■□ 3.38
CCM2-218ENST00000541586 LGR6Q9HBX8 967 aa36.13■■■■□ 3.37
CCM2-218ENST00000541586 KAT6BQ8WYB5 2073 aa36.12■■■■□ 3.37
CCM2-218ENST00000541586 RNF123Q5XPI4 1314 aa36.12■■■■□ 3.37
CCM2-218ENST00000541586 EP400Q96L91 3159 aa36.12■■■■□ 3.37
CCM2-218ENST00000541586 NKX1-1Q15270 411 aaPredicted RBP36.12■■■■□ 3.37
CCM2-218ENST00000541586 FAM196AQ6ZSG2 479 aa36.12■■■■□ 3.37
CCM2-218ENST00000541586 MAP3K5Q99683 1374 aa36.12■■■■□ 3.37
CCM2-218ENST00000541586 DLG5Q8TDM6 1919 aa36.11■■■■□ 3.37
CCM2-218ENST00000541586 DCTN1Q14203 1278 aa36.11■■■■□ 3.37
CCM2-218ENST00000541586 DCAF5Q96JK2 942 aa36.11■■■■□ 3.37
CCM2-218ENST00000541586 ILDR2Q71H61 639 aa36.11■■■■□ 3.37
CCM2-218ENST00000541586 SYTL4Q96C24 671 aaPredicted RBP36.11■■■■□ 3.37
CCM2-218ENST00000541586 MCM10Q7L590 875 aa36.1■■■■□ 3.37
CCM2-218ENST00000541586 IL16Q14005 1332 aa36.1■■■■□ 3.37
CCM2-218ENST00000541586 LMOD3Q0VAK6 560 aa36.08■■■■□ 3.37
CCM2-218ENST00000541586 RNMTO43148 476 aaKnown RBP36.08■■■■□ 3.37
CCM2-218ENST00000541586 IL17REQ8NFR9 667 aa36.08■■■■□ 3.37
CCM2-218ENST00000541586 MYH16Q9H6N6 1097 aa36.08■■■■□ 3.37
CCM2-218ENST00000541586 PRIM1P49642 420 aaKnown RBP36.06■■■■□ 3.36
CCM2-218ENST00000541586 KCNQ2O43526 872 aa36.05■■■■□ 3.36
CCM2-218ENST00000541586 IRX6P78412 446 aaPredicted RBP36.04■■■■□ 3.36
CCM2-218ENST00000541586 THUMPD2Q9BTF0 503 aaKnown RBP36.04■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms