RNA–Protein interactions for RNA: ENST00000540875.1

AC090023.2-201, humanhuman

TSL 3 BASIC

Gene AC090023.2, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090023.2-201ENST00000540875 ABCA5Q8WWZ7 1642 aa6.51□□□□□ -1.37
AC090023.2-201ENST00000540875 FAM193AP78312 1265 aa6.51□□□□□ -1.37
AC090023.2-201ENST00000540875 HS1BP3Q53T59 392 aa6.51□□□□□ -1.37
AC090023.2-201ENST00000540875 TICAM2Q86XR7 235 aa6.51□□□□□ -1.37
AC090023.2-201ENST00000540875 GEMIN8Q9NWZ8 242 aaKnown RBP6.51□□□□□ -1.37
AC090023.2-201ENST00000540875 GAPVD1Q14C86 1478 aa6.51□□□□□ -1.37
AC090023.2-201ENST00000540875 CLASP1Q7Z460 1538 aa6.5□□□□□ -1.37
AC090023.2-201ENST00000540875 WDR97A6NE52 1622 aa6.5□□□□□ -1.37
AC090023.2-201ENST00000540875 AQRO60306 1485 aaKnown RBP eCLIP6.5□□□□□ -1.37
AC090023.2-201ENST00000540875 ZSCAN20P17040 1043 aaPredicted RBP6.5□□□□□ -1.37
AC090023.2-201ENST00000540875 DDX10Q13206 875 aaKnown RBP6.5□□□□□ -1.37
AC090023.2-201ENST00000540875 KIAA1211Q6ZU35 1233 aa6.5□□□□□ -1.37
AC090023.2-201ENST00000540875 ZNF830Q96NB3 372 aaPredicted RBP6.5□□□□□ -1.37
AC090023.2-201ENST00000540875 FHAD1B1AJZ9 1412 aa6.5□□□□□ -1.37
AC090023.2-201ENST00000540875 MROH2BQ7Z745 1585 aa6.49□□□□□ -1.37
AC090023.2-201ENST00000540875 CFTRP13569 1480 aa6.49□□□□□ -1.37
AC090023.2-201ENST00000540875 IBTKQ9P2D0 1353 aaPredicted RBP6.49□□□□□ -1.37
AC090023.2-201ENST00000540875 ZBTB24O43167 697 aaPredicted RBP6.49□□□□□ -1.37
AC090023.2-201ENST00000540875 CREBRFQ8IUR6 639 aa6.49□□□□□ -1.37
AC090023.2-201ENST00000540875 UNC93B1Q9H1C4 597 aa6.49□□□□□ -1.37
AC090023.2-201ENST00000540875 MYH16Q9H6N6 1097 aa6.49□□□□□ -1.37
AC090023.2-201ENST00000540875 POLR1AO95602 1720 aaPredicted RBP6.48□□□□□ -1.37
AC090023.2-201ENST00000540875 DISP3Q9P2K9 1392 aa6.48□□□□□ -1.37
AC090023.2-201ENST00000540875 SLC19A1P41440 591 aa6.48□□□□□ -1.37
AC090023.2-201ENST00000540875 RPIAP49247 311 aa6.48□□□□□ -1.37
AC090023.2-201ENST00000540875 SETQ01105 290 aaPredicted RBP6.48□□□□□ -1.37
AC090023.2-201ENST00000540875 DNTTIP2Q5QJE6 756 aaKnown RBP6.48□□□□□ -1.37
AC090023.2-201ENST00000540875 BAP1Q92560 729 aa6.48□□□□□ -1.37
AC090023.2-201ENST00000540875 NUDCQ9Y266 331 aa6.48□□□□□ -1.37
AC090023.2-201ENST00000540875 CCDC9Q9Y3X0 531 aaKnown RBP6.48□□□□□ -1.37
AC090023.2-201ENST00000540875 ERICH3Q5RHP9 1530 aa6.48□□□□□ -1.37
AC090023.2-201ENST00000540875 CLIP1P30622 1438 aa6.48□□□□□ -1.37
AC090023.2-201ENST00000540875 CCDC88BA6NC98 1476 aa6.47□□□□□ -1.37
AC090023.2-201ENST00000540875 CCDC66A2RUB6 948 aa6.47□□□□□ -1.37
AC090023.2-201ENST00000540875 CD2BP2O95400 341 aaKnown RBP6.47□□□□□ -1.37
AC090023.2-201ENST00000540875 MCM5P33992 734 aa6.47□□□□□ -1.37
AC090023.2-201ENST00000540875 IRX6P78412 446 aaPredicted RBP6.47□□□□□ -1.37
AC090023.2-201ENST00000540875 RALBP1Q15311 655 aa6.47□□□□□ -1.37
AC090023.2-201ENST00000540875 CNPY4Q8N129 248 aa6.47□□□□□ -1.37
AC090023.2-201ENST00000540875 PRKD2Q9BZL6 878 aa6.47□□□□□ -1.37
AC090023.2-201ENST00000540875 FKBPLQ9UIM3 349 aa6.47□□□□□ -1.37
AC090023.2-201ENST00000540875 SYNJ2O15056 1496 aa6.47□□□□□ -1.37
AC090023.2-201ENST00000540875 CFAP65Q6ZU64 1925 aaKnown RBP6.46□□□□□ -1.37
AC090023.2-201ENST00000540875 KIF13AQ9H1H9 1805 aa6.46□□□□□ -1.37
AC090023.2-201ENST00000540875 GPR37L1O60883 481 aa6.46□□□□□ -1.38
AC090023.2-201ENST00000540875 FRAT2O75474 233 aaPredicted RBP6.46□□□□□ -1.38
AC090023.2-201ENST00000540875 XRCC6P12956 609 aaKnown RBP eCLIP6.46□□□□□ -1.38
AC090023.2-201ENST00000540875 TRIM32Q13049 653 aa6.46□□□□□ -1.38
AC090023.2-201ENST00000540875 SPRYD7Q5W111 196 aa6.46□□□□□ -1.38
AC090023.2-201ENST00000540875 ZSCAN30Q86W11 494 aa6.46□□□□□ -1.38
AC090023.2-201ENST00000540875 ARMC2Q8NEN0 867 aa6.46□□□□□ -1.38
AC090023.2-201ENST00000540875 POM121Q96HA1 1249 aa6.46□□□□□ -1.38
AC090023.2-201ENST00000540875 EFCC1Q9HA90 598 aa6.46□□□□□ -1.38
AC090023.2-201ENST00000540875 GDPD2Q9HCC8 539 aa6.46□□□□□ -1.38
AC090023.2-201ENST00000540875 ZHX1Q9UKY1 873 aaPredicted RBP6.46□□□□□ -1.38
AC090023.2-201ENST00000540875 TBC1D2BQ9UPU7 963 aa6.46□□□□□ -1.38
AC090023.2-201ENST00000540875 HDAC5Q9UQL6 1122 aa6.46□□□□□ -1.38
AC090023.2-201ENST00000540875 COG6Q9Y2V7 657 aa6.46□□□□□ -1.38
AC090023.2-201ENST00000540875 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.46□□□□□ -1.38
AC090023.2-201ENST00000540875 ZMYM3Q14202 1370 aa6.45□□□□□ -1.38
AC090023.2-201ENST00000540875 SYNJ1O43426 1573 aa6.45□□□□□ -1.38
AC090023.2-201ENST00000540875 CNTLNQ9NXG0 1405 aa6.45□□□□□ -1.38
AC090023.2-201ENST00000540875 UBTFP17480 764 aaKnown RBP6.45□□□□□ -1.38
AC090023.2-201ENST00000540875 RIPK4P57078 832 aa6.45□□□□□ -1.38
AC090023.2-201ENST00000540875 SKOR1P84550 965 aa6.45□□□□□ -1.38
AC090023.2-201ENST00000540875 CCDC173Q0VFZ6 552 aa6.45□□□□□ -1.38
AC090023.2-201ENST00000540875 BECN1Q14457 450 aa6.45□□□□□ -1.38
AC090023.2-201ENST00000540875 NBPF20Q3BBV1 942 aa6.45□□□□□ -1.38
AC090023.2-201ENST00000540875 LINC01559Q495D7 138 aa6.45□□□□□ -1.38
AC090023.2-201ENST00000540875 CC2D1BQ5T0F9 858 aaKnown RBP6.45□□□□□ -1.38
AC090023.2-201ENST00000540875 V9GY48 417 aaPredicted RBP6.45□□□□□ -1.38
AC090023.2-201ENST00000540875 ADGRL1O94910 1474 aa6.45□□□□□ -1.38
AC090023.2-201ENST00000540875 KDM6BO15054 1643 aa6.44□□□□□ -1.38
AC090023.2-201ENST00000540875 APBB1O00213 710 aa6.44□□□□□ -1.38
AC090023.2-201ENST00000540875 ZNF500O60304 480 aaPredicted RBP6.44□□□□□ -1.38
AC090023.2-201ENST00000540875 SH3BP2P78314 561 aa6.44□□□□□ -1.38
AC090023.2-201ENST00000540875 CTR9Q6PD62 1173 aa6.44□□□□□ -1.38
AC090023.2-201ENST00000540875 ZNF598Q86UK7 904 aaKnown RBP6.44□□□□□ -1.38
AC090023.2-201ENST00000540875 CHMP7Q8WUX9 453 aaPredicted RBP6.44□□□□□ -1.38
AC090023.2-201ENST00000540875 CLUAP1Q96AJ1 413 aa6.44□□□□□ -1.38
AC090023.2-201ENST00000540875 NDUFB9Q9Y6M9 179 aa6.44□□□□□ -1.38
AC090023.2-201ENST00000540875 RGS20O76081 388 aa6.43□□□□□ -1.38
AC090023.2-201ENST00000540875 APPP05067 770 aa6.43□□□□□ -1.38
AC090023.2-201ENST00000540875 MSNP26038 577 aaKnown RBP6.43□□□□□ -1.38
AC090023.2-201ENST00000540875 GABPB1Q06547 395 aaPredicted RBP6.43□□□□□ -1.38
AC090023.2-201ENST00000540875 IRF5Q13568 498 aa6.43□□□□□ -1.38
AC090023.2-201ENST00000540875 NBPF1Q3BBV0 1214 aa6.43□□□□□ -1.38
AC090023.2-201ENST00000540875 PDXDC2PQ6P474 469 aa6.43□□□□□ -1.38
AC090023.2-201ENST00000540875 WWC1Q8IX03 1113 aa6.43□□□□□ -1.38
AC090023.2-201ENST00000540875 ZNF511Q8NB15 262 aa6.43□□□□□ -1.38
AC090023.2-201ENST00000540875 PNMA1Q8ND90 353 aa6.43□□□□□ -1.38
AC090023.2-201ENST00000540875 GPKOWQ92917 476 aaPredicted RBP eCLIP6.43□□□□□ -1.38
AC090023.2-201ENST00000540875 FOXJ1Q92949 421 aa6.43□□□□□ -1.38
AC090023.2-201ENST00000540875 PPP1R9BQ96SB3 815 aa6.43□□□□□ -1.38
AC090023.2-201ENST00000540875 PLCD4Q9BRC7 762 aa6.43□□□□□ -1.38
AC090023.2-201ENST00000540875 PRM3Q9NNZ6 103 aa6.43□□□□□ -1.38
AC090023.2-201ENST00000540875 ZMYM4Q5VZL5 1548 aa6.43□□□□□ -1.38
AC090023.2-201ENST00000540875 TOPBP1Q92547 1522 aa6.43□□□□□ -1.38
AC090023.2-201ENST00000540875 ZC3H4Q9UPT8 1303 aaKnown RBP6.43□□□□□ -1.38
AC090023.2-201ENST00000540875 RAD21O60216 631 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms