RNA–Protein interactions for RNA: ENST00000540080.5

CLTA-210, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-210ENST00000540080 NCAPD2Q15021 1401 aa31.21■■■□□ 2.59
CLTA-210ENST00000540080 ACSBG1Q96GR2 724 aa31.19■■■□□ 2.58
CLTA-210ENST00000540080 IL13P35225 146 aa31.18■■■□□ 2.58
CLTA-210ENST00000540080 BCL11BQ9C0K0 894 aaPredicted RBP31.18■■■□□ 2.58
CLTA-210ENST00000540080 IGSF1Q8N6C5 1336 aa31.18■■■□□ 2.58
CLTA-210ENST00000540080 SBF2Q86WG5 1849 aa31.17■■■□□ 2.58
CLTA-210ENST00000540080 KCNQ2O43526 872 aa31.16■■■□□ 2.58
CLTA-210ENST00000540080 EZH2Q15910 746 aaKnown RBP31.15■■■□□ 2.58
CLTA-210ENST00000540080 SHANK3Q9BYB0 1731 aa31.13■■■□□ 2.57
CLTA-210ENST00000540080 CAMKK2Q96RR4 588 aa31.13■■■□□ 2.57
CLTA-210ENST00000540080 DIAPH1O60610 1272 aaKnown RBP31.12■■■□□ 2.57
CLTA-210ENST00000540080 PPP2R1AP30153 589 aa31.12■■■□□ 2.57
CLTA-210ENST00000540080 AEBP1Q8IUX7 1158 aa31.12■■■□□ 2.57
CLTA-210ENST00000540080 SPG7Q9UQ90 795 aa31.12■■■□□ 2.57
CLTA-210ENST00000540080 PCDH11XQ9BZA7 1347 aa31.12■■■□□ 2.57
CLTA-210ENST00000540080 PCDH11YQ9BZA8 1340 aa31.12■■■□□ 2.57
CLTA-210ENST00000540080 SULT6B1Q6IMI4 303 aa31.11■■■□□ 2.57
CLTA-210ENST00000540080 CYP27B1O15528 508 aa31.09■■■□□ 2.57
CLTA-210ENST00000540080 SYTL4Q96C24 671 aaPredicted RBP31.07■■■□□ 2.56
CLTA-210ENST00000540080 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.07■■■□□ 2.561e-8■■■■□ 20.2
CLTA-210ENST00000540080 PRIM1P49642 420 aaKnown RBP31.06■■■□□ 2.56
CLTA-210ENST00000540080 CFAP53Q96M91 514 aa31.06■■■□□ 2.56
CLTA-210ENST00000540080 PKD1L3Q7Z443 1732 aa31.05■■■□□ 2.56
CLTA-210ENST00000540080 PLSCR1O15162 318 aa31.05■■■□□ 2.56
CLTA-210ENST00000540080 NHSQ6T4R5 1651 aa31.05■■■□□ 2.56
CLTA-210ENST00000540080 HMOX1P09601 288 aa31.04■■■□□ 2.56
CLTA-210ENST00000540080 KAT6BQ8WYB5 2073 aa31.04■■■□□ 2.56
CLTA-210ENST00000540080 PARD3Q8TEW0 1356 aa31.04■■■□□ 2.56
CLTA-210ENST00000540080 COL3A1P02461 1466 aaPredicted RBP31.03■■■□□ 2.56
CLTA-210ENST00000540080 U2SURPO15042 1029 aaKnown RBP31.02■■■□□ 2.56
CLTA-210ENST00000540080 PLEKHO1Q53GL0 409 aaPredicted RBP31.02■■■□□ 2.56
CLTA-210ENST00000540080 KDRP35968 1356 aa31.01■■■□□ 2.55
CLTA-210ENST00000540080 ZNF316A6NFI3 1004 aaPredicted RBP31■■■□□ 2.55
CLTA-210ENST00000540080 IFNL2Q8IZJ0 200 aa31■■■□□ 2.55
CLTA-210ENST00000540080 DOT1LQ8TEK3 1739 aa30.99■■■□□ 2.55
CLTA-210ENST00000540080 PHKG2P15735 406 aa30.99■■■□□ 2.55
CLTA-210ENST00000540080 AMOTQ4VCS5 1084 aa30.98■■■□□ 2.55
CLTA-210ENST00000540080 PLEKHG2Q9H7P9 1386 aa30.97■■■□□ 2.55
CLTA-210ENST00000540080 NKX1-1Q15270 411 aaPredicted RBP30.97■■■□□ 2.55
CLTA-210ENST00000540080 RALBP1Q15311 655 aa30.96■■■□□ 2.55
CLTA-210ENST00000540080 PROM2Q8N271 834 aa30.96■■■□□ 2.55
CLTA-210ENST00000540080 BTAF1O14981 1849 aa30.96■■■□□ 2.55
CLTA-210ENST00000540080 ZNF530Q6P9A1 599 aaPredicted RBP30.95■■■□□ 2.55
CLTA-210ENST00000540080 TXNRD1Q16881 649 aa30.94■■■□□ 2.54
CLTA-210ENST00000540080 RREB1Q92766 1687 aa30.93■■■□□ 2.54
CLTA-210ENST00000540080 MPRIPQ6WCQ1 1025 aa30.93■■■□□ 2.54
CLTA-210ENST00000540080 NUDCQ9Y266 331 aa30.93■■■□□ 2.54
CLTA-210ENST00000540080 RGPD3A6NKT7 1758 aaPredicted RBP30.92■■■□□ 2.54
CLTA-210ENST00000540080 RGPD4Q7Z3J3 1758 aa30.92■■■□□ 2.54
CLTA-210ENST00000540080 PSDA5PKW4 1024 aaPredicted RBP30.91■■■□□ 2.54
CLTA-210ENST00000540080 C1orf141Q5JVX7 400 aa30.9■■■□□ 2.54
CLTA-210ENST00000540080 NUP188Q5SRE5 1749 aa30.9■■■□□ 2.54
CLTA-210ENST00000540080 R3HDM1Q15032 1099 aaKnown RBP30.89■■■□□ 2.54
CLTA-210ENST00000540080 NBPF14Q5TI25 921 aa30.89■■■□□ 2.54
CLTA-210ENST00000540080 TOGARAM1Q9Y4F4 1720 aa30.88■■■□□ 2.53
CLTA-210ENST00000540080 HSP90AB1P08238 724 aaKnown RBP30.88■■■□□ 2.53
CLTA-210ENST00000540080 U2AF1L5P0DN76 240 aaPredicted RBP30.88■■■□□ 2.53
CLTA-210ENST00000540080 U2AF1Q01081 240 aaKnown RBP eCLIP30.88■■■□□ 2.53
CLTA-210ENST00000540080 DCAF5Q96JK2 942 aa30.86■■■□□ 2.53
CLTA-210ENST00000540080 MTHFSDQ2M296 383 aaKnown RBP30.85■■■□□ 2.53
CLTA-210ENST00000540080 PIGBQ92521 554 aa30.85■■■□□ 2.53
CLTA-210ENST00000540080 TMOD3Q9NYL9 352 aa30.84■■■□□ 2.53
CLTA-210ENST00000540080 MYBBP1AQ9BQG0 1328 aaKnown RBP30.83■■■□□ 2.53
CLTA-210ENST00000540080 ITGB4P16144 1822 aa30.82■■■□□ 2.52
CLTA-210ENST00000540080 PRKAR2BP31323 418 aa30.82■■■□□ 2.52
CLTA-210ENST00000540080 AKAP4Q5JQC9 854 aa30.82■■■□□ 2.52
CLTA-210ENST00000540080 RSPH6AQ9H0K4 717 aa30.82■■■□□ 2.52
CLTA-210ENST00000540080 LRRC4BQ9NT99 713 aa30.82■■■□□ 2.52
CLTA-210ENST00000540080 KCNQ4P56696 695 aa30.81■■■□□ 2.52
CLTA-210ENST00000540080 ANO8Q9HCE9 1232 aaPredicted RBP30.81■■■□□ 2.52
CLTA-210ENST00000540080 KDM6AO15550 1401 aaPredicted RBP30.81■■■□□ 2.52
CLTA-210ENST00000540080 ERVV-2B6SEH9 535 aa30.8■■■□□ 2.52
CLTA-210ENST00000540080 PRKRIP1Q9H875 184 aaPredicted RBP30.8■■■□□ 2.52
CLTA-210ENST00000540080 SLC27A3Q5K4L6 730 aa30.79■■■□□ 2.52
CLTA-210ENST00000540080 CABP4P57796 275 aa30.78■■■□□ 2.52
CLTA-210ENST00000540080 PHACTR3Q96KR7 559 aa30.78■■■□□ 2.52
CLTA-210ENST00000540080 FCHSD2O94868 740 aa30.77■■■□□ 2.52
CLTA-210ENST00000540080 CCNL1Q9UK58 526 aaPredicted RBP30.77■■■□□ 2.52
CLTA-210ENST00000540080 PALLDQ8WX93 1383 aa30.77■■■□□ 2.52
CLTA-210ENST00000540080 SMARCC1Q92922 1105 aaPredicted RBP30.76■■■□□ 2.51
CLTA-210ENST00000540080 STK32BQ9NY57 414 aa30.76■■■□□ 2.51
CLTA-210ENST00000540080 ASAP1Q9ULH1 1129 aa30.76■■■□□ 2.51
CLTA-210ENST00000540080 LGR6Q9HBX8 967 aa30.75■■■□□ 2.51
CLTA-210ENST00000540080 GAS2L2Q8NHY3 880 aa30.74■■■□□ 2.51
CLTA-210ENST00000540080 LY75O60449 1722 aa30.73■■■□□ 2.51
CLTA-210ENST00000540080 SLC15A2Q16348 729 aa30.72■■■□□ 2.51
CLTA-210ENST00000540080 NFATC2IPQ8NCF5 419 aa30.72■■■□□ 2.51
CLTA-210ENST00000540080 ATG3Q9NT62 314 aa30.72■■■□□ 2.51
CLTA-210ENST00000540080 RNMTO43148 476 aaKnown RBP30.71■■■□□ 2.51
CLTA-210ENST00000540080 GNAT3A8MTJ3 354 aa30.68■■■□□ 2.5
CLTA-210ENST00000540080 ZNF827Q17R98 1081 aa30.68■■■□□ 2.5
CLTA-210ENST00000540080 MAP3K5Q99683 1374 aa30.67■■■□□ 2.5
CLTA-210ENST00000540080 SCN11AQ9UI33 1791 aa30.67■■■□□ 2.5
CLTA-210ENST00000540080 PAPPAQ13219 1627 aa30.67■■■□□ 2.5
CLTA-210ENST00000540080 LOC102724428A0A0B4J2F2 783 aa30.66■■■□□ 2.5
CLTA-210ENST00000540080 SIK1P57059 783 aa30.66■■■□□ 2.5
CLTA-210ENST00000540080 AKT1S1Q96B36 256 aa30.66■■■□□ 2.5
CLTA-210ENST00000540080 SLC52A2Q9HAB3 445 aa30.66■■■□□ 2.5
CLTA-210ENST00000540080 PDGFDQ9GZP0 370 aaPredicted RBP30.65■■■□□ 2.5
CLTA-210ENST00000540080 NEFMP07197 916 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms