RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 ERVK-9P63128 1117 aa9.62□□□□□ -0.87
MRE11-209ENST00000540013 EML3Q32P44 896 aa9.62□□□□□ -0.87
MRE11-209ENST00000540013 ZNF784Q8NCA9 323 aaPredicted RBP9.62□□□□□ -0.87
MRE11-209ENST00000540013 ITPKCQ96DU7 683 aa9.62□□□□□ -0.87
MRE11-209ENST00000540013 CCDC85AQ96PX6 553 aaPredicted RBP9.62□□□□□ -0.87
MRE11-209ENST00000540013 UCN2Q96RP3 112 aa9.62□□□□□ -0.87
MRE11-209ENST00000540013 PPP1R12CQ9BZL4 782 aa9.62□□□□□ -0.87
MRE11-209ENST00000540013 USP17L5A8MUK1 530 aa9.61□□□□□ -0.87
MRE11-209ENST00000540013 PLEKHM2Q8IWE5 1019 aa9.61□□□□□ -0.87
MRE11-209ENST00000540013 SHROOM4Q9ULL8 1493 aa9.6□□□□□ -0.87
MRE11-209ENST00000540013 PALM3A6NDB9 673 aaPredicted RBP9.6□□□□□ -0.87
MRE11-209ENST00000540013 PIK3CDO00329 1044 aa9.6□□□□□ -0.87
MRE11-209ENST00000540013 UPP2O95045 317 aa9.6□□□□□ -0.87
MRE11-209ENST00000540013 LCE2AQ5TA79 106 aaPredicted RBP9.6□□□□□ -0.87
MRE11-209ENST00000540013 TMPRSS4Q9NRS4 437 aa9.6□□□□□ -0.87
MRE11-209ENST00000540013 OXLD1Q5BKU9 147 aa9.59□□□□□ -0.87
MRE11-209ENST00000540013 TBC1D9Q6ZT07 1266 aa9.59□□□□□ -0.87
MRE11-209ENST00000540013 Q6ZVU0 165 aa9.59□□□□□ -0.87
MRE11-209ENST00000540013 CYP2U1Q7Z449 544 aa9.59□□□□□ -0.87
MRE11-209ENST00000540013 ZFAND3Q9H8U3 227 aa9.59□□□□□ -0.87
MRE11-209ENST00000540013 CYLDQ9NQC7 956 aa9.59□□□□□ -0.87
MRE11-209ENST00000540013 TFIP11Q9UBB9 837 aaKnown RBP9.59□□□□□ -0.87
MRE11-209ENST00000540013 NOD1Q9Y239 953 aa9.59□□□□□ -0.87
MRE11-209ENST00000540013 BICRAQ9NZM4 1560 aa9.58□□□□□ -0.88
MRE11-209ENST00000540013 USP17L3A6NCW0 530 aa9.58□□□□□ -0.88
MRE11-209ENST00000540013 USP17L4A6NCW7 530 aa9.58□□□□□ -0.88
MRE11-209ENST00000540013 USP17L2Q6R6M4 530 aa9.58□□□□□ -0.88
MRE11-209ENST00000540013 USP17L1Q7RTZ2 530 aa9.58□□□□□ -0.88
MRE11-209ENST00000540013 TRIM50Q86XT4 487 aa9.58□□□□□ -0.88
MRE11-209ENST00000540013 MEIOBQ8N635 442 aa9.58□□□□□ -0.88
MRE11-209ENST00000540013 TSEN34Q9BSV6 310 aaKnown RBP9.58□□□□□ -0.88
MRE11-209ENST00000540013 TRAIPQ9BWF2 469 aa9.58□□□□□ -0.88
MRE11-209ENST00000540013 MAFBQ9Y5Q3 323 aaPredicted RBP9.58□□□□□ -0.88
MRE11-209ENST00000540013 LILRA1O75019 489 aa9.57□□□□□ -0.88
MRE11-209ENST00000540013 ADH1AP07327 375 aa9.57□□□□□ -0.88
MRE11-209ENST00000540013 NCOA4Q13772 614 aa9.57□□□□□ -0.88
MRE11-209ENST00000540013 ATP5J2-PTCD1G3V325 749 aa9.56□□□□□ -0.88
MRE11-209ENST00000540013 ATP1A2P50993 1020 aa9.56□□□□□ -0.88
MRE11-209ENST00000540013 SCARF1Q14162 830 aa9.56□□□□□ -0.88
MRE11-209ENST00000540013 CCDC82Q8N4S0 544 aa9.56□□□□□ -0.88
MRE11-209ENST00000540013 CDCA7Q9BWT1 371 aaPredicted RBP9.56□□□□□ -0.88
MRE11-209ENST00000540013 STK17AQ9UEE5 414 aa9.56□□□□□ -0.88
MRE11-209ENST00000540013 LMOD1P29536 600 aaPredicted RBP9.55□□□□□ -0.88
MRE11-209ENST00000540013 AAASQ9NRG9 546 aa9.55□□□□□ -0.88
MRE11-209ENST00000540013 GNRH1P01148 92 aa9.54□□□□□ -0.88
MRE11-209ENST00000540013 SCTRP47872 440 aa9.54□□□□□ -0.88
MRE11-209ENST00000540013 TSGA10IPQ3SY00 556 aa9.54□□□□□ -0.88
MRE11-209ENST00000540013 RGS22Q8NE09 1264 aa9.54□□□□□ -0.88
MRE11-209ENST00000540013 IGSF3O75054 1194 aa9.53□□□□□ -0.88
MRE11-209ENST00000540013 CBLBQ13191 982 aa9.53□□□□□ -0.88
MRE11-209ENST00000540013 MRPL14Q6P1L8 145 aaKnown RBP9.53□□□□□ -0.88
MRE11-209ENST00000540013 LINC00528Q8N1L1 170 aa9.53□□□□□ -0.88
MRE11-209ENST00000540013 DEPDC4Q8N2C3 294 aa9.53□□□□□ -0.88
MRE11-209ENST00000540013 OSBPL3Q9H4L5 887 aa9.53□□□□□ -0.88
MRE11-209ENST00000540013 ESCO1Q5FWF5 840 aa9.52□□□□□ -0.89
MRE11-209ENST00000540013 CFAP70Q5T0N1 1121 aa9.52□□□□□ -0.89
MRE11-209ENST00000540013 VRTNQ9H8Y1 702 aa9.52□□□□□ -0.89
MRE11-209ENST00000540013 MKRN1Q9UHC7 482 aaKnown RBP9.52□□□□□ -0.89
MRE11-209ENST00000540013 SCRIBQ14160 1630 aa9.52□□□□□ -0.89
MRE11-209ENST00000540013 ADD1P35611 737 aaKnown RBP9.51□□□□□ -0.89
MRE11-209ENST00000540013 PTGIRP43119 386 aa9.51□□□□□ -0.89
MRE11-209ENST00000540013 GTF2IP78347 998 aa9.51□□□□□ -0.89
MRE11-209ENST00000540013 SENP2Q9HC62 589 aa9.51□□□□□ -0.89
MRE11-209ENST00000540013 RBM19Q9Y4C8 960 aaKnown RBP9.51□□□□□ -0.89
MRE11-209ENST00000540013 ST8SIA5O15466 376 aa9.5□□□□□ -0.89
MRE11-209ENST00000540013 HMGB1P09429 215 aaKnown RBP9.5□□□□□ -0.89
MRE11-209ENST00000540013 BMP2P12643 396 aa9.5□□□□□ -0.89
MRE11-209ENST00000540013 PSME1Q06323 249 aa9.5□□□□□ -0.89
MRE11-209ENST00000540013 KIFC2Q96AC6 838 aa9.5□□□□□ -0.89
MRE11-209ENST00000540013 ATP13A2Q9NQ11 1180 aa9.5□□□□□ -0.89
MRE11-209ENST00000540013 RELBQ01201 579 aa9.49□□□□□ -0.89
MRE11-209ENST00000540013 LARP1Q6PKG0 1096 aaKnown RBP9.49□□□□□ -0.89
MRE11-209ENST00000540013 LARGE2Q8N3Y3 721 aa9.49□□□□□ -0.89
MRE11-209ENST00000540013 SPINT1O43278 529 aa9.48□□□□□ -0.89
MRE11-209ENST00000540013 PPP1R15AO75807 674 aaPredicted RBP9.48□□□□□ -0.89
MRE11-209ENST00000540013 PBXIP1Q96AQ6 731 aa9.48□□□□□ -0.89
MRE11-209ENST00000540013 NLRP3Q96P20 1036 aa9.48□□□□□ -0.89
MRE11-209ENST00000540013 DNAAF2Q9NVR5 837 aaKnown RBP9.48□□□□□ -0.89
MRE11-209ENST00000540013 FAM196BA6NMK8 535 aa9.47□□□□□ -0.89
MRE11-209ENST00000540013 WASLO00401 505 aaPredicted RBP9.47□□□□□ -0.89
MRE11-209ENST00000540013 BMP1P13497 986 aa9.47□□□□□ -0.89
MRE11-209ENST00000540013 RASA1P20936 1047 aa9.47□□□□□ -0.89
MRE11-209ENST00000540013 RFX1P22670 979 aa9.47□□□□□ -0.89
MRE11-209ENST00000540013 CLN3Q13286 438 aa9.47□□□□□ -0.89
MRE11-209ENST00000540013 OGFOD1Q8N543 542 aa9.47□□□□□ -0.89
MRE11-209ENST00000540013 AGBL1Q96MI9 1066 aa9.47□□□□□ -0.89
MRE11-209ENST00000540013 PCDHGA11Q9Y5H2 935 aa9.47□□□□□ -0.89
MRE11-209ENST00000540013 GPC1P35052 558 aa9.46□□□□□ -0.9
MRE11-209ENST00000540013 C6orf118Q5T5N4 469 aa9.46□□□□□ -0.9
MRE11-209ENST00000540013 KANK4Q5T7N3 995 aaPredicted RBP9.46□□□□□ -0.9
MRE11-209ENST00000540013 TRIM46Q7Z4K8 759 aa9.46□□□□□ -0.9
MRE11-209ENST00000540013 PURBQ96QR8 312 aaKnown RBP9.46□□□□□ -0.9
MRE11-209ENST00000540013 ARHGEF10LQ9HCE6 1279 aa9.46□□□□□ -0.9
MRE11-209ENST00000540013 A0A1W2PRU2 124 aa9.45□□□□□ -0.9
MRE11-209ENST00000540013 BACH1O14867 736 aa9.45□□□□□ -0.9
MRE11-209ENST00000540013 TMCO4Q5TGY1 634 aa9.45□□□□□ -0.9
MRE11-209ENST00000540013 SIX5Q8N196 739 aa9.45□□□□□ -0.9
MRE11-209ENST00000540013 ZFP42Q96MM3 310 aa9.45□□□□□ -0.9
MRE11-209ENST00000540013 ESYT1Q9BSJ8 1104 aa9.45□□□□□ -0.9
MRE11-209ENST00000540013 MEN1O00255 615 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms