RNA–Protein interactions for RNA: ENST00000539927.1

C1RL-207, Transcript of complement C1r subcomponent like, humanhuman

TSL 2

Gene C1RL, Length 354 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-207ENST00000539927 KLHL34Q8N239 644 aa27.38■■□□□ 1.97
C1RL-207ENST00000539927 AKT1S1Q96B36 256 aa27.37■■□□□ 1.97
C1RL-207ENST00000539927 ZCRB1Q8TBF4 217 aaKnown RBP27.36■■□□□ 1.97
C1RL-207ENST00000539927 MEGF6O75095 1541 aa27.36■■□□□ 1.97
C1RL-207ENST00000539927 RRS1Q15050 365 aaKnown RBP27.35■■□□□ 1.97
C1RL-207ENST00000539927 ZNF784Q8NCA9 323 aaPredicted RBP27.35■■□□□ 1.97
C1RL-207ENST00000539927 ANKRD36BQ8N2N9 1353 aa27.35■■□□□ 1.97
C1RL-207ENST00000539927 TFCP2L1Q9NZI6 479 aa27.34■■□□□ 1.97
C1RL-207ENST00000539927 ITGB4P16144 1822 aa27.34■■□□□ 1.97
C1RL-207ENST00000539927 TAF1LQ8IZX4 1826 aa27.33■■□□□ 1.97
C1RL-207ENST00000539927 PNPLA7Q6ZV29 1317 aa27.33■■□□□ 1.97
C1RL-207ENST00000539927 SLC24A1O60721 1099 aa27.32■■□□□ 1.96
C1RL-207ENST00000539927 USHBP1Q8N6Y0 703 aa27.32■■□□□ 1.96
C1RL-207ENST00000539927 GGNBP2Q9H3C7 697 aa27.32■■□□□ 1.96
C1RL-207ENST00000539927 SLC16A10Q8TF71 515 aa27.31■■□□□ 1.96
C1RL-207ENST00000539927 MAP3K5Q99683 1374 aa27.31■■□□□ 1.96
C1RL-207ENST00000539927 C5P01031 1676 aa27.3■■□□□ 1.96
C1RL-207ENST00000539927 POLD1P28340 1107 aa27.3■■□□□ 1.96
C1RL-207ENST00000539927 GPR162Q16538 588 aa27.3■■□□□ 1.96
C1RL-207ENST00000539927 RTL1A6NKG5 1358 aa27.3■■□□□ 1.96
C1RL-207ENST00000539927 NSD2O96028 1365 aa27.3■■□□□ 1.96
C1RL-207ENST00000539927 GOLGB1Q14789 3259 aaKnown RBP27.29■■□□□ 1.96
C1RL-207ENST00000539927 NBPF6Q5VWK0 638 aa27.29■■□□□ 1.96
C1RL-207ENST00000539927 NBPF4Q96M43 638 aa27.29■■□□□ 1.96
C1RL-207ENST00000539927 MAP2P11137 1827 aaKnown RBP27.29■■□□□ 1.96
C1RL-207ENST00000539927 FYB1O15117 783 aa27.28■■□□□ 1.96
C1RL-207ENST00000539927 PELP1Q8IZL8 1130 aaKnown RBP27.28■■□□□ 1.96
C1RL-207ENST00000539927 CCNL1Q9UK58 526 aaPredicted RBP27.28■■□□□ 1.96
C1RL-207ENST00000539927 SMG6Q86US8 1419 aaKnown RBP27.27■■□□□ 1.96
C1RL-207ENST00000539927 TMF1P82094 1093 aa27.27■■□□□ 1.96
C1RL-207ENST00000539927 MSH5O43196 834 aa27.26■■□□□ 1.95
C1RL-207ENST00000539927 RAPGEF4Q8WZA2 1011 aa27.26■■□□□ 1.95
C1RL-207ENST00000539927 USP47Q96K76 1375 aa27.25■■□□□ 1.95
C1RL-207ENST00000539927 TATP17735 454 aaPredicted RBP27.23■■□□□ 1.95
C1RL-207ENST00000539927 TOGARAM1Q9Y4F4 1720 aa27.22■■□□□ 1.95
C1RL-207ENST00000539927 HSP90AB2PQ58FF8 381 aa27.21■■□□□ 1.95
C1RL-207ENST00000539927 CGNL1Q0VF96 1302 aa27.2■■□□□ 1.95
C1RL-207ENST00000539927 NLGN2Q8NFZ4 835 aa27.2■■□□□ 1.94
C1RL-207ENST00000539927 PKD1L3Q7Z443 1732 aa27.19■■□□□ 1.94
C1RL-207ENST00000539927 COL23A1Q86Y22 540 aaPredicted RBP27.18■■□□□ 1.94
C1RL-207ENST00000539927 INSRP06213 1382 aa27.18■■□□□ 1.94
C1RL-207ENST00000539927 MSL1Q68DK7 614 aa27.17■■□□□ 1.94
C1RL-207ENST00000539927 FLT4P35916 1363 aa27.17■■□□□ 1.94
C1RL-207ENST00000539927 PCDH11XQ9BZA7 1347 aa27.16■■□□□ 1.94
C1RL-207ENST00000539927 PCDH11YQ9BZA8 1340 aa27.16■■□□□ 1.94
C1RL-207ENST00000539927 UBR3Q6ZT12 1888 aa27.15■■□□□ 1.94
C1RL-207ENST00000539927 CDCA8Q53HL2 280 aa27.15■■□□□ 1.94
C1RL-207ENST00000539927 MPRIPQ6WCQ1 1025 aa27.15■■□□□ 1.94
C1RL-207ENST00000539927 C4BP0C0L5 1744 aa27.13■■□□□ 1.93
C1RL-207ENST00000539927 ANKRD26Q9UPS8 1709 aa27.13■■□□□ 1.93
C1RL-207ENST00000539927 EMILIN1Q9Y6C2 1016 aa27.12■■□□□ 1.93
C1RL-207ENST00000539927 NSD3Q9BZ95 1437 aa27.12■■□□□ 1.93
C1RL-207ENST00000539927 PALLDQ8WX93 1383 aa27.11■■□□□ 1.93
C1RL-207ENST00000539927 SENP3-EIF4A1A0A087X0R7 540 aa27.11■■□□□ 1.93
C1RL-207ENST00000539927 PPM1GO15355 546 aaPredicted RBP27.11■■□□□ 1.93
C1RL-207ENST00000539927 CYP27B1O15528 508 aa27.1■■□□□ 1.93
C1RL-207ENST00000539927 C1QTNF8P60827 252 aa27.1■■□□□ 1.93
C1RL-207ENST00000539927 CARD14Q9BXL6 1004 aa27.1■■□□□ 1.93
C1RL-207ENST00000539927 KIF24Q5T7B8 1368 aa27.09■■□□□ 1.93
C1RL-207ENST00000539927 YBX3P16989 372 aaKnown RBP eCLIP27.07■■□□□ 1.92
C1RL-207ENST00000539927 GIGYF1O75420 1035 aaPredicted RBP27.04■■□□□ 1.92
C1RL-207ENST00000539927 FLAD1Q8NFF5 587 aa27.04■■□□□ 1.92
C1RL-207ENST00000539927 GRIN3BO60391 1043 aa27.03■■□□□ 1.92
C1RL-207ENST00000539927 TRIM26Q12899 539 aaPredicted RBP27.03■■□□□ 1.92
C1RL-207ENST00000539927 SMARCC1Q92922 1105 aaPredicted RBP27.03■■□□□ 1.92
C1RL-207ENST00000539927 AK7Q96M32 723 aa27.03■■□□□ 1.92
C1RL-207ENST00000539927 HMGB2P26583 209 aaKnown RBP27.02■■□□□ 1.92
C1RL-207ENST00000539927 PHF14O94880 888 aa27.01■■□□□ 1.91
C1RL-207ENST00000539927 PIGBQ92521 554 aa27.01■■□□□ 1.91
C1RL-207ENST00000539927 SMIM5Q71RC9 77 aa27■■□□□ 1.91
C1RL-207ENST00000539927 POLR3GLQ9BT43 218 aa27■■□□□ 1.91
C1RL-207ENST00000539927 SPG7Q9UQ90 795 aa27■■□□□ 1.91
C1RL-207ENST00000539927 NCAPD2Q15021 1401 aa26.99■■□□□ 1.91
C1RL-207ENST00000539927 AMIGO3Q86WK7 504 aa26.98■■□□□ 1.91
C1RL-207ENST00000539927 WASHC2AQ641Q2 1341 aa26.97■■□□□ 1.91
C1RL-207ENST00000539927 EYA1Q99502 592 aa26.97■■□□□ 1.91
C1RL-207ENST00000539927 CD2APQ9Y5K6 639 aa26.97■■□□□ 1.91
C1RL-207ENST00000539927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.95■■□□□ 1.9
C1RL-207ENST00000539927 NKX1-1Q15270 411 aaPredicted RBP26.95■■□□□ 1.9
C1RL-207ENST00000539927 TMOD3Q9NYL9 352 aa26.95■■□□□ 1.9
C1RL-207ENST00000539927 TNNT2P45379 298 aaPredicted RBP26.94■■□□□ 1.9
C1RL-207ENST00000539927 WWC3Q9ULE0 1092 aa26.94■■□□□ 1.9
C1RL-207ENST00000539927 LOC102724428A0A0B4J2F2 783 aa26.93■■□□□ 1.9
C1RL-207ENST00000539927 SIK1P57059 783 aa26.93■■□□□ 1.9
C1RL-207ENST00000539927 LINC00116Q8NCU8 138 aa26.93■■□□□ 1.9
C1RL-207ENST00000539927 POLKQ9UBT6 870 aa26.93■■□□□ 1.9
C1RL-207ENST00000539927 ASAP1Q9ULH1 1129 aa26.92■■□□□ 1.9
C1RL-207ENST00000539927 N4BP2Q86UW6 1770 aaPredicted RBP26.92■■□□□ 1.9
C1RL-207ENST00000539927 ATP10DQ9P241 1426 aa26.9■■□□□ 1.9
C1RL-207ENST00000539927 IFNL2Q8IZJ0 200 aa26.9■■□□□ 1.9
C1RL-207ENST00000539927 PHKG2P15735 406 aa26.89■■□□□ 1.9
C1RL-207ENST00000539927 ATP6V1AP38606 617 aa26.89■■□□□ 1.9
C1RL-207ENST00000539927 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.89■■□□□ 1.9
C1RL-207ENST00000539927 IGSF1Q8N6C5 1336 aa26.89■■□□□ 1.89
C1RL-207ENST00000539927 GNPATO15228 680 aa26.88■■□□□ 1.89
C1RL-207ENST00000539927 SSFA2P28290 1259 aa26.88■■□□□ 1.89
C1RL-207ENST00000539927 ITPK1Q13572 414 aa26.88■■□□□ 1.89
C1RL-207ENST00000539927 KIF13BQ9NQT8 1826 aa26.88■■□□□ 1.89
C1RL-207ENST00000539927 MYH14Q7Z406 1995 aaKnown RBP26.88■■□□□ 1.89
C1RL-207ENST00000539927 EIF4A2Q14240 407 aaKnown RBP26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms