RNA–Protein interactions for RNA: ENST00000539735.5

COPS7A-210, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COPS7A, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-210ENST00000539735 PLCH1Q4KWH8 1693 aa23.54■■□□□ 1.36
COPS7A-210ENST00000539735 LARP1Q6PKG0 1096 aaKnown RBP23.54■■□□□ 1.36
COPS7A-210ENST00000539735 CSB-PGBD3P0DP91 1061 aa23.53■■□□□ 1.36
COPS7A-210ENST00000539735 PDE3AQ14432 1141 aa23.53■■□□□ 1.36
COPS7A-210ENST00000539735 IP6K1Q92551 441 aa23.53■■□□□ 1.36
COPS7A-210ENST00000539735 PNNQ9H307 717 aaKnown RBP23.53■■□□□ 1.36
COPS7A-210ENST00000539735 USP35Q9P2H5 1018 aa23.53■■□□□ 1.36
COPS7A-210ENST00000539735 BCAR3O75815 825 aa23.52■■□□□ 1.36
COPS7A-210ENST00000539735 HOXC9P31274 260 aa23.52■■□□□ 1.36
COPS7A-210ENST00000539735 TMPOP42166 694 aaKnown RBP23.52■■□□□ 1.36
COPS7A-210ENST00000539735 FCHSD2O94868 740 aa23.51■■□□□ 1.35
COPS7A-210ENST00000539735 IL13P35225 146 aa23.51■■□□□ 1.35
COPS7A-210ENST00000539735 COL5A2P05997 1499 aaPredicted RBP23.5■■□□□ 1.35
COPS7A-210ENST00000539735 TOM1L2Q6ZVM7 507 aa23.5■■□□□ 1.35
COPS7A-210ENST00000539735 NWD2Q9ULI1 1742 aa23.5■■□□□ 1.35
COPS7A-210ENST00000539735 LTV1Q96GA3 475 aaPredicted RBP23.49■■□□□ 1.35
COPS7A-210ENST00000539735 LMO7Q8WWI1 1683 aa23.49■■□□□ 1.35
COPS7A-210ENST00000539735 SPATA31A5Q5VU36 1347 aa23.49■■□□□ 1.35
COPS7A-210ENST00000539735 SPATA31A7Q8IWB4 1347 aa23.49■■□□□ 1.35
COPS7A-210ENST00000539735 RSPH6AQ9H0K4 717 aa23.49■■□□□ 1.35
COPS7A-210ENST00000539735 ANKRD24Q8TF21 1146 aa23.48■■□□□ 1.35
COPS7A-210ENST00000539735 ERBB3P21860 1342 aa23.48■■□□□ 1.35
COPS7A-210ENST00000539735 WDR17Q8IZU2 1322 aa23.48■■□□□ 1.35
COPS7A-210ENST00000539735 HMOX1P09601 288 aa23.47■■□□□ 1.35
COPS7A-210ENST00000539735 PRKAR2BP31323 418 aa23.47■■□□□ 1.35
COPS7A-210ENST00000539735 HSP90AB2PQ58FF8 381 aa23.47■■□□□ 1.35
COPS7A-210ENST00000539735 ILDR2Q71H61 639 aa23.47■■□□□ 1.35
COPS7A-210ENST00000539735 RTL1A6NKG5 1358 aa23.46■■□□□ 1.35
COPS7A-210ENST00000539735 SPATA31A1Q5TZJ5 1347 aa23.46■■□□□ 1.35
COPS7A-210ENST00000539735 FLT4P35916 1363 aa23.46■■□□□ 1.35
COPS7A-210ENST00000539735 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.45■■□□□ 1.35
COPS7A-210ENST00000539735 A0A0G2JS52 829 aa23.45■■□□□ 1.34
COPS7A-210ENST00000539735 FAM98CQ17RN3 349 aaKnown RBP23.45■■□□□ 1.34
COPS7A-210ENST00000539735 NLRP2Q9NX02 1062 aa23.45■■□□□ 1.34
COPS7A-210ENST00000539735 TRIM35Q9UPQ4 493 aa23.45■■□□□ 1.34
COPS7A-210ENST00000539735 COL18A1P39060 1754 aa23.45■■□□□ 1.34
COPS7A-210ENST00000539735 NEFMP07197 916 aa23.45■■□□□ 1.34
COPS7A-210ENST00000539735 RIPK4P57078 832 aa23.45■■□□□ 1.34
COPS7A-210ENST00000539735 MYH16Q9H6N6 1097 aa23.45■■□□□ 1.34
COPS7A-210ENST00000539735 ZBTB47Q9UFB7 747 aaPredicted RBP23.45■■□□□ 1.34
COPS7A-210ENST00000539735 ABCC6O95255 1503 aa23.45■■□□□ 1.34
COPS7A-210ENST00000539735 KIF24Q5T7B8 1368 aa23.44■■□□□ 1.34
COPS7A-210ENST00000539735 NRAPQ86VF7 1730 aa23.44■■□□□ 1.34
COPS7A-210ENST00000539735 CRB1P82279 1406 aa23.44■■□□□ 1.34
COPS7A-210ENST00000539735 LTN1O94822 1766 aa23.44■■□□□ 1.34
COPS7A-210ENST00000539735 RARSP54136 660 aaKnown RBP23.43■■□□□ 1.34
COPS7A-210ENST00000539735 AAMPQ13685 434 aa23.43■■□□□ 1.34
COPS7A-210ENST00000539735 CANXP27824 592 aaKnown RBP23.42■■□□□ 1.34
COPS7A-210ENST00000539735 PHACTR3Q96KR7 559 aa23.4■■□□□ 1.34
COPS7A-210ENST00000539735 CARD10Q9BWT7 1032 aa23.4■■□□□ 1.34
COPS7A-210ENST00000539735 CT47B1P0C2W7 299 aaPredicted RBP23.4■■□□□ 1.34
COPS7A-210ENST00000539735 GLI3P10071 1580 aa23.4■■□□□ 1.34
COPS7A-210ENST00000539735 EIF4A2Q14240 407 aaKnown RBP23.4■■□□□ 1.34
COPS7A-210ENST00000539735 PEAK1Q9H792 1746 aa23.39■■□□□ 1.34
COPS7A-210ENST00000539735 ONECUT3O60422 494 aaPredicted RBP23.39■■□□□ 1.33
COPS7A-210ENST00000539735 SEPT12Q8IYM1 358 aa23.39■■□□□ 1.33
COPS7A-210ENST00000539735 THRAP3Q9Y2W1 955 aaKnown RBP23.39■■□□□ 1.33
COPS7A-210ENST00000539735 RGS12O14924 1447 aa23.38■■□□□ 1.33
COPS7A-210ENST00000539735 CLUAP1Q96AJ1 413 aa23.38■■□□□ 1.33
COPS7A-210ENST00000539735 NFE2L2Q16236 605 aa23.37■■□□□ 1.33
COPS7A-210ENST00000539735 BARGINQ6ZT62 677 aa23.37■■□□□ 1.33
COPS7A-210ENST00000539735 SKAP1Q86WV1 359 aa23.37■■□□□ 1.33
COPS7A-210ENST00000539735 RGPD5Q99666 1765 aa23.37■■□□□ 1.33
COPS7A-210ENST00000539735 NBPF6Q5VWK0 638 aa23.36■■□□□ 1.33
COPS7A-210ENST00000539735 NPM2Q86SE8 214 aaKnown RBP23.36■■□□□ 1.33
COPS7A-210ENST00000539735 TSR2Q969E8 191 aaKnown RBP23.36■■□□□ 1.33
COPS7A-210ENST00000539735 NBPF4Q96M43 638 aa23.36■■□□□ 1.33
COPS7A-210ENST00000539735 FAM161AQ3B820 660 aa23.35■■□□□ 1.33
COPS7A-210ENST00000539735 IL16Q14005 1332 aa23.35■■□□□ 1.33
COPS7A-210ENST00000539735 PANK1Q8TE04 598 aa23.33■■□□□ 1.33
COPS7A-210ENST00000539735 SULT6B1Q6IMI4 303 aa23.33■■□□□ 1.32
COPS7A-210ENST00000539735 USHBP1Q8N6Y0 703 aa23.33■■□□□ 1.32
COPS7A-210ENST00000539735 COG6Q9Y2V7 657 aa23.33■■□□□ 1.32
COPS7A-210ENST00000539735 AEBP1Q8IUX7 1158 aa23.32■■□□□ 1.32
COPS7A-210ENST00000539735 FRAT1Q92837 279 aaPredicted RBP23.32■■□□□ 1.32
COPS7A-210ENST00000539735 EP400Q96L91 3159 aa23.31■■□□□ 1.32
COPS7A-210ENST00000539735 DDRGK1Q96HY6 314 aa23.31■■□□□ 1.32
COPS7A-210ENST00000539735 CDCA7Q9BWT1 371 aaPredicted RBP23.31■■□□□ 1.32
COPS7A-210ENST00000539735 IL2RBP14784 551 aa23.29■■□□□ 1.32
COPS7A-210ENST00000539735 EXOSC9Q06265 439 aaKnown RBP23.29■■□□□ 1.32
COPS7A-210ENST00000539735 C8orf34Q49A92 452 aa23.29■■□□□ 1.32
COPS7A-210ENST00000539735 EYA1Q99502 592 aa23.29■■□□□ 1.32
COPS7A-210ENST00000539735 IGHDP01880 384 aa23.29■■□□□ 1.32
COPS7A-210ENST00000539735 KRT27Q7Z3Y8 459 aa23.29■■□□□ 1.32
COPS7A-210ENST00000539735 DDB1Q16531 1140 aa23.27■■□□□ 1.32
COPS7A-210ENST00000539735 THUMPD2Q9BTF0 503 aaKnown RBP23.27■■□□□ 1.32
COPS7A-210ENST00000539735 BCL2L13Q9BXK5 485 aa23.27■■□□□ 1.32
COPS7A-210ENST00000539735 RGPD1P0DJD0 1748 aa23.27■■□□□ 1.32
COPS7A-210ENST00000539735 LAS1LQ9Y4W2 734 aaKnown RBP23.26■■□□□ 1.31
COPS7A-210ENST00000539735 RAPGEF4Q8WZA2 1011 aa23.26■■□□□ 1.31
COPS7A-210ENST00000539735 EXOC5O00471 708 aa23.25■■□□□ 1.31
COPS7A-210ENST00000539735 LMOD3Q0VAK6 560 aa23.25■■□□□ 1.31
COPS7A-210ENST00000539735 RLBP1P12271 317 aa23.24■■□□□ 1.31
COPS7A-210ENST00000539735 RGS3P49796 1198 aa23.24■■□□□ 1.31
COPS7A-210ENST00000539735 CALD1Q05682 793 aaKnown RBP23.24■■□□□ 1.31
COPS7A-210ENST00000539735 ZKSCAN2Q63HK3 967 aa23.24■■□□□ 1.31
COPS7A-210ENST00000539735 FAM182BQ5T319 152 aa23.24■■□□□ 1.31
COPS7A-210ENST00000539735 DLG5Q8TDM6 1919 aa23.23■■□□□ 1.31
COPS7A-210ENST00000539735 DISP2A7MBM2 1401 aa23.23■■□□□ 1.31
COPS7A-210ENST00000539735 THSD7AQ9UPZ6 1657 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms