RNA–Protein interactions for RNA: ENST00000539594.5

ESRRA-206, Transcript of estrogen related receptor alpha, humanhuman

TSL 3

Gene ESRRA, Length 747 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-206ENST00000539594 ZEB1P37275 1124 aaPredicted RBP38.1■■■■□ 3.69
ESRRA-206ENST00000539594 EYA1Q99502 592 aa38.1■■■■□ 3.69
ESRRA-206ENST00000539594 EZH2Q15910 746 aaKnown RBP38.09■■■■□ 3.69
ESRRA-206ENST00000539594 SHANK3Q9BYB0 1731 aa38.08■■■■□ 3.69
ESRRA-206ENST00000539594 RGPD3A6NKT7 1758 aaPredicted RBP38.08■■■■□ 3.69
ESRRA-206ENST00000539594 RGPD4Q7Z3J3 1758 aa38.08■■■■□ 3.69
ESRRA-206ENST00000539594 NHSQ6T4R5 1651 aa38.07■■■■□ 3.69
ESRRA-206ENST00000539594 PLSCR1O15162 318 aa38.07■■■■□ 3.68
ESRRA-206ENST00000539594 PLEKHG2Q9H7P9 1386 aa38.03■■■■□ 3.68
ESRRA-206ENST00000539594 RREB1Q92766 1687 aa38.02■■■■□ 3.68
ESRRA-206ENST00000539594 IGSF1Q8N6C5 1336 aa38.02■■■■□ 3.68
ESRRA-206ENST00000539594 PCDH11XQ9BZA7 1347 aa38.02■■■■□ 3.68
ESRRA-206ENST00000539594 PCDH11YQ9BZA8 1340 aa38.02■■■■□ 3.68
ESRRA-206ENST00000539594 ACSBG1Q96GR2 724 aa38.01■■■■□ 3.68
ESRRA-206ENST00000539594 PKD1L3Q7Z443 1732 aa38.01■■■■□ 3.67
ESRRA-206ENST00000539594 MTHFSP49914 203 aa38■■■■□ 3.67
ESRRA-206ENST00000539594 PTF1AQ7RTS3 328 aa38■■■■□ 3.67
ESRRA-206ENST00000539594 KCNQ2O43526 872 aa37.98■■■■□ 3.67
ESRRA-206ENST00000539594 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP37.98■■■■□ 3.67
ESRRA-206ENST00000539594 SPG7Q9UQ90 795 aa37.97■■■■□ 3.67
ESRRA-206ENST00000539594 NUP188Q5SRE5 1749 aa37.93■■■■□ 3.66
ESRRA-206ENST00000539594 CNGB1Q14028 1251 aaPredicted RBP37.93■■■■□ 3.66
ESRRA-206ENST00000539594 BTAF1O14981 1849 aa37.93■■■■□ 3.66
ESRRA-206ENST00000539594 DOT1LQ8TEK3 1739 aa37.92■■■■□ 3.66
ESRRA-206ENST00000539594 IL13P35225 146 aa37.92■■■■□ 3.66
ESRRA-206ENST00000539594 NBPF14Q5TI25 921 aa37.9■■■■□ 3.66
ESRRA-206ENST00000539594 CYP27B1O15528 508 aa37.89■■■■□ 3.66
ESRRA-206ENST00000539594 PRIM1P49642 420 aaKnown RBP37.86■■■■□ 3.65
ESRRA-206ENST00000539594 SYTL4Q96C24 671 aaPredicted RBP37.86■■■■□ 3.65
ESRRA-206ENST00000539594 KDRP35968 1356 aa37.85■■■■□ 3.65
ESRRA-206ENST00000539594 DIAPH1O60610 1272 aaKnown RBP37.85■■■■□ 3.65
ESRRA-206ENST00000539594 NKX1-1Q15270 411 aaPredicted RBP37.84■■■■□ 3.65
ESRRA-206ENST00000539594 TXNRD1Q16881 649 aa37.84■■■■□ 3.65
ESRRA-206ENST00000539594 SULT6B1Q6IMI4 303 aa37.83■■■■□ 3.65
ESRRA-206ENST00000539594 IFNL2Q8IZJ0 200 aa37.83■■■■□ 3.65
ESRRA-206ENST00000539594 AMOTQ4VCS5 1084 aa37.82■■■■□ 3.64
ESRRA-206ENST00000539594 PLEKHO1Q53GL0 409 aaPredicted RBP37.82■■■■□ 3.64
ESRRA-206ENST00000539594 PROM2Q8N271 834 aa37.82■■■■□ 3.64
ESRRA-206ENST00000539594 PSDA5PKW4 1024 aaPredicted RBP37.79■■■■□ 3.64
ESRRA-206ENST00000539594 R3HDM1Q15032 1099 aaKnown RBP37.79■■■■□ 3.64
ESRRA-206ENST00000539594 AEBP1Q8IUX7 1158 aa37.79■■■■□ 3.64
ESRRA-206ENST00000539594 PHKG2P15735 406 aa37.78■■■■□ 3.64
ESRRA-206ENST00000539594 CFAP53Q96M91 514 aa37.78■■■■□ 3.64
ESRRA-206ENST00000539594 COL3A1P02461 1466 aaPredicted RBP37.77■■■■□ 3.64
ESRRA-206ENST00000539594 PPP2R1AP30153 589 aa37.75■■■■□ 3.63
ESRRA-206ENST00000539594 HSP90AB1P08238 724 aaKnown RBP37.74■■■■□ 3.63
ESRRA-206ENST00000539594 ITGB4P16144 1822 aa37.73■■■■□ 3.63
ESRRA-206ENST00000539594 TOGARAM1Q9Y4F4 1720 aa37.73■■■■□ 3.63
ESRRA-206ENST00000539594 SLC27A3Q5K4L6 730 aa37.72■■■■□ 3.63
ESRRA-206ENST00000539594 DDX10Q13206 875 aaKnown RBP37.71■■■■□ 3.63
ESRRA-206ENST00000539594 ZNF530Q6P9A1 599 aaPredicted RBP37.7■■■■□ 3.63
ESRRA-206ENST00000539594 LY75O60449 1722 aa37.7■■■■□ 3.63
ESRRA-206ENST00000539594 MPRIPQ6WCQ1 1025 aa37.69■■■■□ 3.62
ESRRA-206ENST00000539594 HMOX1P09601 288 aa37.67■■■■□ 3.62
ESRRA-206ENST00000539594 C1orf141Q5JVX7 400 aa37.67■■■■□ 3.62
ESRRA-206ENST00000539594 DCAF5Q96JK2 942 aa37.67■■■■□ 3.62
ESRRA-206ENST00000539594 STK32BQ9NY57 414 aa37.67■■■■□ 3.62
ESRRA-206ENST00000539594 ANO8Q9HCE9 1232 aaPredicted RBP37.66■■■■□ 3.62
ESRRA-206ENST00000539594 U2SURPO15042 1029 aaKnown RBP37.65■■■■□ 3.62
ESRRA-206ENST00000539594 NUDCQ9Y266 331 aa37.65■■■■□ 3.62
ESRRA-206ENST00000539594 HMGB2P26583 209 aaKnown RBP37.64■■■■□ 3.62
ESRRA-206ENST00000539594 SMARCC1Q92922 1105 aaPredicted RBP37.64■■■■□ 3.62
ESRRA-206ENST00000539594 TMOD3Q9NYL9 352 aa37.63■■■■□ 3.61
ESRRA-206ENST00000539594 PAPPAQ13219 1627 aa37.62■■■■□ 3.61
ESRRA-206ENST00000539594 ERVV-2B6SEH9 535 aa37.62■■■■□ 3.61
ESRRA-206ENST00000539594 RALBP1Q15311 655 aa37.61■■■■□ 3.61
ESRRA-206ENST00000539594 SLC15A2Q16348 729 aa37.61■■■■□ 3.61
ESRRA-206ENST00000539594 PIGBQ92521 554 aa37.61■■■■□ 3.61
ESRRA-206ENST00000539594 LRRC4BQ9NT99 713 aa37.61■■■■□ 3.61
ESRRA-206ENST00000539594 LRP5O75197 1615 aa37.59■■■■□ 3.61
ESRRA-206ENST00000539594 PALLDQ8WX93 1383 aa37.58■■■■□ 3.61
ESRRA-206ENST00000539594 AKAP4Q5JQC9 854 aa37.58■■■■□ 3.61
ESRRA-206ENST00000539594 CCNL1Q9UK58 526 aaPredicted RBP37.58■■■■□ 3.61
ESRRA-206ENST00000539594 KDM6AO15550 1401 aaPredicted RBP37.54■■■■□ 3.6
ESRRA-206ENST00000539594 SCN11AQ9UI33 1791 aa37.51■■■■□ 3.6
ESRRA-206ENST00000539594 CABP4P57796 275 aa37.51■■■■□ 3.6
ESRRA-206ENST00000539594 MTHFSDQ2M296 383 aaKnown RBP37.5■■■■□ 3.59
ESRRA-206ENST00000539594 CASZ1Q86V15 1759 aa37.5■■■■□ 3.59
ESRRA-206ENST00000539594 U2AF1L5P0DN76 240 aaPredicted RBP37.49■■■■□ 3.59
ESRRA-206ENST00000539594 U2AF1Q01081 240 aaKnown RBP eCLIP37.49■■■■□ 3.59
ESRRA-206ENST00000539594 AKT1S1Q96B36 256 aa37.49■■■■□ 3.59
ESRRA-206ENST00000539594 KCNQ4P56696 695 aa37.47■■■■□ 3.59
ESRRA-206ENST00000539594 ZNF827Q17R98 1081 aa37.47■■■■□ 3.59
ESRRA-206ENST00000539594 GAS2L2Q8NHY3 880 aa37.47■■■■□ 3.59
ESRRA-206ENST00000539594 SRCAPQ6ZRS2 3230 aa37.47■■■■□ 3.59
ESRRA-206ENST00000539594 QSER1Q2KHR3 1735 aa37.47■■■■□ 3.59
ESRRA-206ENST00000539594 FCHSD2O94868 740 aa37.46■■■■□ 3.59
ESRRA-206ENST00000539594 RSPH6AQ9H0K4 717 aa37.46■■■■□ 3.59
ESRRA-206ENST00000539594 ASAP1Q9ULH1 1129 aa37.46■■■■□ 3.59
ESRRA-206ENST00000539594 C5P01031 1676 aa37.46■■■■□ 3.59
ESRRA-206ENST00000539594 ATG3Q9NT62 314 aa37.45■■■■□ 3.59
ESRRA-206ENST00000539594 TAF1LQ8IZX4 1826 aa37.45■■■■□ 3.59
ESRRA-206ENST00000539594 PRKAR2BP31323 418 aa37.44■■■■□ 3.58
ESRRA-206ENST00000539594 VIRMAQ69YN4 1812 aaKnown RBP37.43■■■■□ 3.58
ESRRA-206ENST00000539594 SPON1Q9HCB6 807 aa37.43■■■■□ 3.58
ESRRA-206ENST00000539594 LOC102724428A0A0B4J2F2 783 aa37.42■■■■□ 3.58
ESRRA-206ENST00000539594 SIK1P57059 783 aa37.42■■■■□ 3.58
ESRRA-206ENST00000539594 MYBBP1AQ9BQG0 1328 aaKnown RBP37.41■■■■□ 3.58
ESRRA-206ENST00000539594 TFCP2L1Q9NZI6 479 aa37.41■■■■□ 3.58
ESRRA-206ENST00000539594 RNMTO43148 476 aaKnown RBP37.4■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms