RNA–Protein interactions for RNA: ENST00000539477.5

MLH1-222, Transcript of mutL homolog 1, humanhuman

TSL 2 BASIC

Gene MLH1, Length 2,366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH1-222ENST00000539477 IGSF1Q8N6C5 1336 aa12.51□□□□□ -0.41
MLH1-222ENST00000539477 DIAPH1O60610 1272 aaKnown RBP12.5□□□□□ -0.41
MLH1-222ENST00000539477 SENP3-EIF4A1A0A087X0R7 540 aa12.5□□□□□ -0.41
MLH1-222ENST00000539477 MARCH10Q8NA82 808 aaPredicted RBP12.5□□□□□ -0.41
MLH1-222ENST00000539477 TOGARAM1Q9Y4F4 1720 aa12.5□□□□□ -0.41
MLH1-222ENST00000539477 OVOS2A0A0G2JMS6 1433 aa12.49□□□□□ -0.41
MLH1-222ENST00000539477 NCAPD2Q15021 1401 aa12.49□□□□□ -0.41
MLH1-222ENST00000539477 PDE3BQ13370 1112 aa12.49□□□□□ -0.41
MLH1-222ENST00000539477 RAPGEF4Q8WZA2 1011 aa12.49□□□□□ -0.41
MLH1-222ENST00000539477 TNS1Q9HBL0 1735 aaKnown RBP12.49□□□□□ -0.41
MLH1-222ENST00000539477 MYBBP1AQ9BQG0 1328 aaKnown RBP12.49□□□□□ -0.41
MLH1-222ENST00000539477 DLG5Q8TDM6 1919 aa12.48□□□□□ -0.41
MLH1-222ENST00000539477 ITGB4P16144 1822 aa12.48□□□□□ -0.41
MLH1-222ENST00000539477 RALBP1Q15311 655 aa12.48□□□□□ -0.41
MLH1-222ENST00000539477 ACSBG1Q96GR2 724 aa12.48□□□□□ -0.41
MLH1-222ENST00000539477 EXOC5O00471 708 aa12.47□□□□□ -0.41
MLH1-222ENST00000539477 TRIM37O94972 964 aa12.47□□□□□ -0.41
MLH1-222ENST00000539477 U2AF1L5P0DN76 240 aaPredicted RBP12.46□□□□□ -0.41
MLH1-222ENST00000539477 U2AF1Q01081 240 aaKnown RBP eCLIP12.46□□□□□ -0.41
MLH1-222ENST00000539477 BTAF1O14981 1849 aa12.46□□□□□ -0.41
MLH1-222ENST00000539477 KDRP35968 1356 aa12.45□□□□□ -0.42
MLH1-222ENST00000539477 CYP27B1O15528 508 aa12.45□□□□□ -0.42
MLH1-222ENST00000539477 KCNQ2O43526 872 aa12.45□□□□□ -0.42
MLH1-222ENST00000539477 TATP17735 454 aaPredicted RBP12.45□□□□□ -0.42
MLH1-222ENST00000539477 CFAP53Q96M91 514 aa12.45□□□□□ -0.42
MLH1-222ENST00000539477 ANP32CO43423 234 aa12.45□□□□□ -0.42
MLH1-222ENST00000539477 ZCRB1Q8TBF4 217 aaKnown RBP12.45□□□□□ -0.42
MLH1-222ENST00000539477 UPF1Q92900 1129 aaKnown RBP eCLIP12.44□□□□□ -0.42
MLH1-222ENST00000539477 DEFB132Q7Z7B7 95 aa12.44□□□□□ -0.42
MLH1-222ENST00000539477 SYTL4Q96C24 671 aaPredicted RBP12.44□□□□□ -0.42
MLH1-222ENST00000539477 PRKAR2BP31323 418 aa12.43□□□□□ -0.42
MLH1-222ENST00000539477 PHACTR3Q96KR7 559 aa12.43□□□□□ -0.42
MLH1-222ENST00000539477 NHSQ6T4R5 1651 aa12.43□□□□□ -0.42
MLH1-222ENST00000539477 SOCS7O14512 581 aa12.42□□□□□ -0.42
MLH1-222ENST00000539477 CCDC146Q8IYE0 955 aa12.42□□□□□ -0.42
MLH1-222ENST00000539477 CDCA7Q9BWT1 371 aaPredicted RBP12.42□□□□□ -0.42
MLH1-222ENST00000539477 SCN11AQ9UI33 1791 aa12.42□□□□□ -0.42
MLH1-222ENST00000539477 DIEXFQ68CQ4 756 aaKnown RBP12.42□□□□□ -0.42
MLH1-222ENST00000539477 RSPH6AQ9H0K4 717 aa12.42□□□□□ -0.42
MLH1-222ENST00000539477 PCDH11XQ9BZA7 1347 aa12.41□□□□□ -0.42
MLH1-222ENST00000539477 PCDH11YQ9BZA8 1340 aa12.41□□□□□ -0.42
MLH1-222ENST00000539477 ZNF530Q6P9A1 599 aaPredicted RBP12.41□□□□□ -0.42
MLH1-222ENST00000539477 MTHFSDQ2M296 383 aaKnown RBP12.4□□□□□ -0.42
MLH1-222ENST00000539477 FAM196AQ6ZSG2 479 aa12.4□□□□□ -0.42
MLH1-222ENST00000539477 MPRIPQ6WCQ1 1025 aa12.4□□□□□ -0.43
MLH1-222ENST00000539477 MRS2Q9HD23 443 aa12.4□□□□□ -0.43
MLH1-222ENST00000539477 NUDCQ9Y266 331 aa12.4□□□□□ -0.43
MLH1-222ENST00000539477 KDM6AO15550 1401 aaPredicted RBP12.39□□□□□ -0.43
MLH1-222ENST00000539477 PHKG2P15735 406 aa12.39□□□□□ -0.43
MLH1-222ENST00000539477 PRIM1P49642 420 aaKnown RBP12.38□□□□□ -0.43
MLH1-222ENST00000539477 KCNQ4P56696 695 aa12.38□□□□□ -0.43
MLH1-222ENST00000539477 EN1Q05925 392 aaPredicted RBP12.38□□□□□ -0.43
MLH1-222ENST00000539477 ADAMTS8Q9UP79 889 aa12.38□□□□□ -0.43
MLH1-222ENST00000539477 SPG7Q9UQ90 795 aa12.38□□□□□ -0.43
MLH1-222ENST00000539477 RRP7AQ9Y3A4 280 aaKnown RBP12.37□□□□□ -0.43
MLH1-222ENST00000539477 DCTN1Q14203 1278 aa12.37□□□□□ -0.43
MLH1-222ENST00000539477 MIER1Q8N108 512 aa12.37□□□□□ -0.43
MLH1-222ENST00000539477 APBA3O96018 575 aa12.36□□□□□ -0.43
MLH1-222ENST00000539477 WDR43Q15061 677 aaKnown RBP eCLIP12.36□□□□□ -0.43
MLH1-222ENST00000539477 NEUROD2Q15784 382 aa12.36□□□□□ -0.43
MLH1-222ENST00000539477 PLEKHO1Q53GL0 409 aaPredicted RBP12.36□□□□□ -0.43
MLH1-222ENST00000539477 LGR6Q9HBX8 967 aa12.36□□□□□ -0.43
MLH1-222ENST00000539477 IFNL2Q8IZJ0 200 aa12.36□□□□□ -0.43
MLH1-222ENST00000539477 C1orf141Q5JVX7 400 aa12.35□□□□□ -0.43
MLH1-222ENST00000539477 PLEKHF1Q96S99 279 aa12.35□□□□□ -0.43
MLH1-222ENST00000539477 SIPA1L3O60292 1781 aaPredicted RBP12.35□□□□□ -0.43
MLH1-222ENST00000539477 EZH2Q15910 746 aaKnown RBP12.35□□□□□ -0.43
MLH1-222ENST00000539477 FAM9BQ8IZU0 186 aa12.35□□□□□ -0.43
MLH1-222ENST00000539477 THUMPD2Q9BTF0 503 aaKnown RBP12.35□□□□□ -0.43
MLH1-222ENST00000539477 NUP188Q5SRE5 1749 aa12.34□□□□□ -0.43
MLH1-222ENST00000539477 MCM10Q7L590 875 aa12.34□□□□□ -0.43
MLH1-222ENST00000539477 RREB1Q92766 1687 aa12.34□□□□□ -0.43
MLH1-222ENST00000539477 FCHSD2O94868 740 aa12.34□□□□□ -0.43
MLH1-222ENST00000539477 SF3B2Q13435 895 aaKnown RBP12.34□□□□□ -0.43
MLH1-222ENST00000539477 AMOTQ4VCS5 1084 aa12.34□□□□□ -0.43
MLH1-222ENST00000539477 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.34□□□□□ -0.435e-7■■■■□ 20
MLH1-222ENST00000539477 LY75O60449 1722 aa12.34□□□□□ -0.43
MLH1-222ENST00000539477 ADAMTS7Q9UKP4 1686 aa12.33□□□□□ -0.44
MLH1-222ENST00000539477 PIGBQ92521 554 aa12.33□□□□□ -0.44
MLH1-222ENST00000539477 BCL11BQ9C0K0 894 aaPredicted RBP12.33□□□□□ -0.44
MLH1-222ENST00000539477 MAP3K5Q99683 1374 aa12.33□□□□□ -0.44
MLH1-222ENST00000539477 BCL9O00512 1426 aa12.33□□□□□ -0.44
MLH1-222ENST00000539477 TAF1LQ8IZX4 1826 aa12.32□□□□□ -0.44
MLH1-222ENST00000539477 ASAP1Q9ULH1 1129 aa12.32□□□□□ -0.44
MLH1-222ENST00000539477 MAPK8IP3Q9UPT6 1336 aa12.32□□□□□ -0.44
MLH1-222ENST00000539477 AKAP4Q5JQC9 854 aa12.32□□□□□ -0.44
MLH1-222ENST00000539477 NFATC2IPQ8NCF5 419 aa12.32□□□□□ -0.44
MLH1-222ENST00000539477 PNISRQ8TF01 805 aaKnown RBP12.32□□□□□ -0.44
MLH1-222ENST00000539477 SALL2Q9Y467 1007 aaPredicted RBP12.32□□□□□ -0.44
MLH1-222ENST00000539477 NKX1-1Q15270 411 aaPredicted RBP12.31□□□□□ -0.44
MLH1-222ENST00000539477 TUBGCP6Q96RT7 1819 aa12.31□□□□□ -0.44
MLH1-222ENST00000539477 BAG6P46379 1132 aa12.3□□□□□ -0.44
MLH1-222ENST00000539477 SLC39A6Q13433 755 aa12.3□□□□□ -0.44
MLH1-222ENST00000539477 PROM2Q8N271 834 aa12.3□□□□□ -0.44
MLH1-222ENST00000539477 IL17REQ8NFR9 667 aa12.3□□□□□ -0.44
MLH1-222ENST00000539477 DCAF5Q96JK2 942 aa12.3□□□□□ -0.44
MLH1-222ENST00000539477 TMOD3Q9NYL9 352 aa12.3□□□□□ -0.44
MLH1-222ENST00000539477 RGPD3A6NKT7 1758 aaPredicted RBP12.3□□□□□ -0.44
MLH1-222ENST00000539477 RGPD4Q7Z3J3 1758 aa12.3□□□□□ -0.44
MLH1-222ENST00000539477 GNAT3A8MTJ3 354 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms