RNA–Protein interactions for RNA: ENST00000538162.3

PNMA6B-201, Transcript of PNMA family member 6B (pseudogene), humanhuman

BASIC

Gene PNMA6B, Length 1,200 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6B-201ENST00000538162 ZCRB1Q8TBF4 217 aaKnown RBP27.47■■□□□ 1.99
PNMA6B-201ENST00000538162 DDX54Q8TDD1 881 aaKnown RBP27.47■■□□□ 1.99
PNMA6B-201ENST00000538162 TATP17735 454 aaPredicted RBP27.46■■□□□ 1.99
PNMA6B-201ENST00000538162 PTF1AQ7RTS3 328 aa27.46■■□□□ 1.99
PNMA6B-201ENST00000538162 NUP188Q5SRE5 1749 aa27.45■■□□□ 1.99
PNMA6B-201ENST00000538162 EIF4A2Q14240 407 aaKnown RBP27.45■■□□□ 1.98
PNMA6B-201ENST00000538162 CC2D1BQ5T0F9 858 aaKnown RBP27.45■■□□□ 1.98
PNMA6B-201ENST00000538162 NPC1L1Q9UHC9 1359 aa27.45■■□□□ 1.98
PNMA6B-201ENST00000538162 PKD1L3Q7Z443 1732 aa27.44■■□□□ 1.98
PNMA6B-201ENST00000538162 EYA1Q99502 592 aa27.44■■□□□ 1.98
PNMA6B-201ENST00000538162 ACSBG1Q96GR2 724 aa27.43■■□□□ 1.98
PNMA6B-201ENST00000538162 DOT1LQ8TEK3 1739 aa27.43■■□□□ 1.98
PNMA6B-201ENST00000538162 BTAF1O14981 1849 aa27.42■■□□□ 1.98
PNMA6B-201ENST00000538162 KCNQ2O43526 872 aa27.41■■□□□ 1.98
PNMA6B-201ENST00000538162 PLSCR1O15162 318 aa27.4■■□□□ 1.98
PNMA6B-201ENST00000538162 IGSF1Q8N6C5 1336 aa27.38■■□□□ 1.97
PNMA6B-201ENST00000538162 CNGB1Q14028 1251 aaPredicted RBP27.37■■□□□ 1.97
PNMA6B-201ENST00000538162 PCDH11XQ9BZA7 1347 aa27.37■■□□□ 1.97
PNMA6B-201ENST00000538162 PCDH11YQ9BZA8 1340 aa27.37■■□□□ 1.97
PNMA6B-201ENST00000538162 MTHFSP49914 203 aa27.35■■□□□ 1.97
PNMA6B-201ENST00000538162 PSDA5PKW4 1024 aaPredicted RBP27.32■■□□□ 1.96
PNMA6B-201ENST00000538162 SPG7Q9UQ90 795 aa27.31■■□□□ 1.96
PNMA6B-201ENST00000538162 PLEKHG2Q9H7P9 1386 aa27.31■■□□□ 1.96
PNMA6B-201ENST00000538162 CYP27B1O15528 508 aa27.3■■□□□ 1.96
PNMA6B-201ENST00000538162 IL13P35225 146 aa27.3■■□□□ 1.96
PNMA6B-201ENST00000538162 PRIM1P49642 420 aaKnown RBP27.3■■□□□ 1.96
PNMA6B-201ENST00000538162 SYTL4Q96C24 671 aaPredicted RBP27.3■■□□□ 1.96
PNMA6B-201ENST00000538162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.3■■□□□ 1.96
PNMA6B-201ENST00000538162 R3HDM1Q15032 1099 aaKnown RBP27.29■■□□□ 1.96
PNMA6B-201ENST00000538162 NBPF14Q5TI25 921 aa27.29■■□□□ 1.96
PNMA6B-201ENST00000538162 TOGARAM1Q9Y4F4 1720 aa27.29■■□□□ 1.96
PNMA6B-201ENST00000538162 PROM2Q8N271 834 aa27.28■■□□□ 1.96
PNMA6B-201ENST00000538162 ITGB4P16144 1822 aa27.27■■□□□ 1.96
PNMA6B-201ENST00000538162 TXNRD1Q16881 649 aa27.27■■□□□ 1.96
PNMA6B-201ENST00000538162 ZEB1P37275 1124 aaPredicted RBP27.26■■□□□ 1.95
PNMA6B-201ENST00000538162 AEBP1Q8IUX7 1158 aa27.25■■□□□ 1.95
PNMA6B-201ENST00000538162 KDRP35968 1356 aa27.24■■□□□ 1.95
PNMA6B-201ENST00000538162 COL3A1P02461 1466 aaPredicted RBP27.24■■□□□ 1.95
PNMA6B-201ENST00000538162 LY75O60449 1722 aa27.24■■□□□ 1.95
PNMA6B-201ENST00000538162 SULT6B1Q6IMI4 303 aa27.23■■□□□ 1.95
PNMA6B-201ENST00000538162 DIAPH1O60610 1272 aaKnown RBP27.22■■□□□ 1.95
PNMA6B-201ENST00000538162 NKX1-1Q15270 411 aaPredicted RBP27.22■■□□□ 1.95
PNMA6B-201ENST00000538162 PHKG2P15735 406 aa27.21■■□□□ 1.95
PNMA6B-201ENST00000538162 IFNL2Q8IZJ0 200 aa27.21■■□□□ 1.95
PNMA6B-201ENST00000538162 PLEKHO1Q53GL0 409 aaPredicted RBP27.2■■□□□ 1.94
PNMA6B-201ENST00000538162 ANO8Q9HCE9 1232 aaPredicted RBP27.2■■□□□ 1.94
PNMA6B-201ENST00000538162 PAPPAQ13219 1627 aa27.19■■□□□ 1.94
PNMA6B-201ENST00000538162 LRP5O75197 1615 aa27.19■■□□□ 1.94
PNMA6B-201ENST00000538162 AMOTQ4VCS5 1084 aa27.18■■□□□ 1.94
PNMA6B-201ENST00000538162 PPP2R1AP30153 589 aa27.16■■□□□ 1.94
PNMA6B-201ENST00000538162 MPRIPQ6WCQ1 1025 aa27.16■■□□□ 1.94
PNMA6B-201ENST00000538162 HMOX1P09601 288 aa27.15■■□□□ 1.94
PNMA6B-201ENST00000538162 ZNF530Q6P9A1 599 aaPredicted RBP27.15■■□□□ 1.94
PNMA6B-201ENST00000538162 SLC27A3Q5K4L6 730 aa27.14■■□□□ 1.94
PNMA6B-201ENST00000538162 CFAP53Q96M91 514 aa27.14■■□□□ 1.94
PNMA6B-201ENST00000538162 LRRC4BQ9NT99 713 aa27.14■■□□□ 1.94
PNMA6B-201ENST00000538162 STK32BQ9NY57 414 aa27.14■■□□□ 1.94
PNMA6B-201ENST00000538162 CASZ1Q86V15 1759 aa27.12■■□□□ 1.93
PNMA6B-201ENST00000538162 SRCAPQ6ZRS2 3230 aa27.12■■□□□ 1.93
PNMA6B-201ENST00000538162 HSP90AB1P08238 724 aaKnown RBP27.12■■□□□ 1.93
PNMA6B-201ENST00000538162 DDX10Q13206 875 aaKnown RBP27.12■■□□□ 1.93
PNMA6B-201ENST00000538162 U2SURPO15042 1029 aaKnown RBP27.11■■□□□ 1.93
PNMA6B-201ENST00000538162 SLC15A2Q16348 729 aa27.11■■□□□ 1.93
PNMA6B-201ENST00000538162 PIGBQ92521 554 aa27.1■■□□□ 1.93
PNMA6B-201ENST00000538162 PALLDQ8WX93 1383 aa27.09■■□□□ 1.93
PNMA6B-201ENST00000538162 C1orf141Q5JVX7 400 aa27.09■■□□□ 1.93
PNMA6B-201ENST00000538162 DCAF5Q96JK2 942 aa27.09■■□□□ 1.93
PNMA6B-201ENST00000538162 TMOD3Q9NYL9 352 aa27.09■■□□□ 1.93
PNMA6B-201ENST00000538162 VIRMAQ69YN4 1812 aaKnown RBP27.09■■□□□ 1.93
PNMA6B-201ENST00000538162 KDM6AO15550 1401 aaPredicted RBP27.08■■□□□ 1.93
PNMA6B-201ENST00000538162 SCN11AQ9UI33 1791 aa27.08■■□□□ 1.93
PNMA6B-201ENST00000538162 CCNL1Q9UK58 526 aaPredicted RBP27.08■■□□□ 1.93
PNMA6B-201ENST00000538162 C5P01031 1676 aa27.08■■□□□ 1.92
PNMA6B-201ENST00000538162 TAF1LQ8IZX4 1826 aa27.07■■□□□ 1.92
PNMA6B-201ENST00000538162 KCNQ4P56696 695 aa27.07■■□□□ 1.92
PNMA6B-201ENST00000538162 QSER1Q2KHR3 1735 aa27.07■■□□□ 1.92
PNMA6B-201ENST00000538162 SMARCC1Q92922 1105 aaPredicted RBP27.06■■□□□ 1.92
PNMA6B-201ENST00000538162 TUBGCP6Q96RT7 1819 aa27.06■■□□□ 1.92
PNMA6B-201ENST00000538162 ERVV-2B6SEH9 535 aa27.05■■□□□ 1.92
PNMA6B-201ENST00000538162 ZNF827Q17R98 1081 aa27.05■■□□□ 1.92
PNMA6B-201ENST00000538162 NUDCQ9Y266 331 aa27.04■■□□□ 1.92
PNMA6B-201ENST00000538162 AKAP4Q5JQC9 854 aa27.03■■□□□ 1.92
PNMA6B-201ENST00000538162 AKT1S1Q96B36 256 aa27.02■■□□□ 1.92
PNMA6B-201ENST00000538162 MTHFSDQ2M296 383 aaKnown RBP27.01■■□□□ 1.91
PNMA6B-201ENST00000538162 PDGFDQ9GZP0 370 aaPredicted RBP27.01■■□□□ 1.91
PNMA6B-201ENST00000538162 CABP4P57796 275 aa27■■□□□ 1.91
PNMA6B-201ENST00000538162 ASAP1Q9ULH1 1129 aa27■■□□□ 1.91
PNMA6B-201ENST00000538162 RALBP1Q15311 655 aa26.99■■□□□ 1.91
PNMA6B-201ENST00000538162 ADAMTS7Q9UKP4 1686 aa26.98■■□□□ 1.91
PNMA6B-201ENST00000538162 SPON1Q9HCB6 807 aa26.98■■□□□ 1.91
PNMA6B-201ENST00000538162 C4BP0C0L5 1744 aa26.97■■□□□ 1.91
PNMA6B-201ENST00000538162 U2AF1L5P0DN76 240 aaPredicted RBP26.97■■□□□ 1.91
PNMA6B-201ENST00000538162 U2AF1Q01081 240 aaKnown RBP eCLIP26.97■■□□□ 1.91
PNMA6B-201ENST00000538162 RSPH6AQ9H0K4 717 aa26.97■■□□□ 1.91
PNMA6B-201ENST00000538162 ATG3Q9NT62 314 aa26.97■■□□□ 1.91
PNMA6B-201ENST00000538162 HMGB2P26583 209 aaKnown RBP26.96■■□□□ 1.91
PNMA6B-201ENST00000538162 LOC102724428A0A0B4J2F2 783 aa26.95■■□□□ 1.9
PNMA6B-201ENST00000538162 PRKAR2BP31323 418 aa26.95■■□□□ 1.9
PNMA6B-201ENST00000538162 SIK1P57059 783 aa26.95■■□□□ 1.9
PNMA6B-201ENST00000538162 TFCP2L1Q9NZI6 479 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms