RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 KANK4Q5T7N3 995 aaPredicted RBP8.27□□□□□ -1.09
SNHG1-207ENST00000537965 PROSER2Q86WR7 435 aaPredicted RBP8.27□□□□□ -1.09
SNHG1-207ENST00000537965 SLC52A1Q9NWF4 448 aa8.27□□□□□ -1.09
SNHG1-207ENST00000537965 CHD2O14647 1828 aaKnown RBP8.26□□□□□ -1.09
SNHG1-207ENST00000537965 IDI1Q13907 227 aa8.26□□□□□ -1.09
SNHG1-207ENST00000537965 GRIPAP1Q4V328 841 aa8.26□□□□□ -1.09
SNHG1-207ENST00000537965 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.26□□□□□ -1.09
SNHG1-207ENST00000537965 ABCC5O15440 1437 aa8.26□□□□□ -1.09
SNHG1-207ENST00000537965 MYO5BQ9ULV0 1848 aa8.26□□□□□ -1.09
SNHG1-207ENST00000537965 TMEM94Q12767 1356 aa8.25□□□□□ -1.09
SNHG1-207ENST00000537965 LMTK2Q8IWU2 1503 aa8.25□□□□□ -1.09
SNHG1-207ENST00000537965 ROBO1Q9Y6N7 1651 aa8.25□□□□□ -1.09
SNHG1-207ENST00000537965 TLL1O43897 1013 aa8.25□□□□□ -1.09
SNHG1-207ENST00000537965 KDM4AO75164 1064 aa8.25□□□□□ -1.09
SNHG1-207ENST00000537965 SSTR3P32745 418 aaPredicted RBP8.25□□□□□ -1.09
SNHG1-207ENST00000537965 TTLL12Q14166 644 aaPredicted RBP8.25□□□□□ -1.09
SNHG1-207ENST00000537965 SLC24A3Q9HC58 644 aa8.25□□□□□ -1.09
SNHG1-207ENST00000537965 TET3O43151 1660 aa8.24□□□□□ -1.09
SNHG1-207ENST00000537965 MSH6P52701 1360 aa8.24□□□□□ -1.09
SNHG1-207ENST00000537965 PHLPP1O60346 1717 aa8.24□□□□□ -1.09
SNHG1-207ENST00000537965 DAPK1P53355 1430 aa8.24□□□□□ -1.09
SNHG1-207ENST00000537965 ADH1BP00325 375 aa8.24□□□□□ -1.09
SNHG1-207ENST00000537965 GGCXP38435 758 aa8.24□□□□□ -1.09
SNHG1-207ENST00000537965 USP46P62068 366 aa8.24□□□□□ -1.09
SNHG1-207ENST00000537965 RGS17Q9UGC6 210 aaPredicted RBP8.24□□□□□ -1.09
SNHG1-207ENST00000537965 SLC27A5Q9Y2P5 690 aa8.24□□□□□ -1.09
SNHG1-207ENST00000537965 NKTRP30414 1462 aaKnown RBP8.24□□□□□ -1.09
SNHG1-207ENST00000537965 GIGYF2Q6Y7W6 1299 aaKnown RBP8.23□□□□□ -1.09
SNHG1-207ENST00000537965 THAP11Q96EK4 314 aa8.23□□□□□ -1.09
SNHG1-207ENST00000537965 SLC26A8Q96RN1 970 aa8.23□□□□□ -1.09
SNHG1-207ENST00000537965 SLAIN2Q9P270 581 aa8.23□□□□□ -1.09
SNHG1-207ENST00000537965 SALL2Q9Y467 1007 aaPredicted RBP8.23□□□□□ -1.09
SNHG1-207ENST00000537965 RPRD2Q5VT52 1461 aaKnown RBP8.23□□□□□ -1.09
SNHG1-207ENST00000537965 NOS1P29475 1434 aa8.22□□□□□ -1.09
SNHG1-207ENST00000537965 NCOA3Q9Y6Q9 1424 aa8.22□□□□□ -1.09
SNHG1-207ENST00000537965 LOC105371045A0A1W2PR82 267 aa8.22□□□□□ -1.09
SNHG1-207ENST00000537965 PARP9Q8IXQ6 854 aa8.22□□□□□ -1.09
SNHG1-207ENST00000537965 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.22□□□□□ -1.096e-32■□□□□ 8.9
SNHG1-207ENST00000537965 SPSB2Q99619 263 aa8.22□□□□□ -1.09
SNHG1-207ENST00000537965 CHIC2Q9UKJ5 165 aa8.22□□□□□ -1.09
SNHG1-207ENST00000537965 ADGRB3O60242 1522 aa8.22□□□□□ -1.09
SNHG1-207ENST00000537965 NWD1Q149M9 1564 aa8.22□□□□□ -1.09
SNHG1-207ENST00000537965 FGD6Q6ZV73 1430 aa8.21□□□□□ -1.09
SNHG1-207ENST00000537965 GCC2Q8IWJ2 1684 aa8.21□□□□□ -1.09
SNHG1-207ENST00000537965 PPP1R15AO75807 674 aaPredicted RBP8.21□□□□□ -1.1
SNHG1-207ENST00000537965 JCADQ9P266 1359 aa8.21□□□□□ -1.1
SNHG1-207ENST00000537965 FMNL1O95466 1100 aaPredicted RBP8.2□□□□□ -1.1
SNHG1-207ENST00000537965 PDE4DQ08499 809 aa8.2□□□□□ -1.1
SNHG1-207ENST00000537965 BRICD5Q6PL45 260 aa8.2□□□□□ -1.1
SNHG1-207ENST00000537965 POTEAQ6S8J7 498 aa8.2□□□□□ -1.1
SNHG1-207ENST00000537965 TBX22Q9Y458 520 aa8.2□□□□□ -1.1
SNHG1-207ENST00000537965 PLEKHG1Q9ULL1 1385 aa8.2□□□□□ -1.1
SNHG1-207ENST00000537965 ADGRL2O95490 1459 aa8.19□□□□□ -1.1
SNHG1-207ENST00000537965 RNF223E7ERA6 249 aa8.19□□□□□ -1.1
SNHG1-207ENST00000537965 HOXA2O43364 376 aa8.19□□□□□ -1.1
SNHG1-207ENST00000537965 S1PR4O95977 384 aa8.19□□□□□ -1.1
SNHG1-207ENST00000537965 C14orf37Q86TY3 774 aa8.19□□□□□ -1.1
SNHG1-207ENST00000537965 NUTM1Q86Y26 1132 aa8.19□□□□□ -1.1
SNHG1-207ENST00000537965 SLC6A16Q9GZN6 736 aa8.19□□□□□ -1.1
SNHG1-207ENST00000537965 SPATA31A6Q5VVP1 1343 aa8.19□□□□□ -1.1
SNHG1-207ENST00000537965 SETD1AO15047 1707 aaKnown RBP8.18□□□□□ -1.1
SNHG1-207ENST00000537965 ATF3P18847 181 aa8.18□□□□□ -1.1
SNHG1-207ENST00000537965 Q3C1V9 767 aa8.18□□□□□ -1.1
SNHG1-207ENST00000537965 ZNF772Q68DY9 489 aaPredicted RBP8.18□□□□□ -1.1
SNHG1-207ENST00000537965 C19orf44Q9H6X5 657 aa8.18□□□□□ -1.1
SNHG1-207ENST00000537965 PIK3R4Q99570 1358 aa8.18□□□□□ -1.1
SNHG1-207ENST00000537965 ANKRD50Q9ULJ7 1429 aa8.18□□□□□ -1.1
SNHG1-207ENST00000537965 RIMS2Q9UQ26 1411 aa8.18□□□□□ -1.1
SNHG1-207ENST00000537965 DIP2AQ14689 1571 aa8.18□□□□□ -1.1
SNHG1-207ENST00000537965 TMEM131LA2VDJ0 1609 aa8.18□□□□□ -1.1
SNHG1-207ENST00000537965 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-207ENST00000537965 MS4A1P11836 297 aa8.17□□□□□ -1.1
SNHG1-207ENST00000537965 MEX3CQ5U5Q3 659 aaKnown RBP8.17□□□□□ -1.1
SNHG1-207ENST00000537965 FAM160A2Q8N612 972 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-207ENST00000537965 ANKLE1Q8NAG6 615 aa8.17□□□□□ -1.1
SNHG1-207ENST00000537965 SPIRE2Q8WWL2 714 aa8.17□□□□□ -1.1
SNHG1-207ENST00000537965 HLA-CQ95604 372 aa8.17□□□□□ -1.1
SNHG1-207ENST00000537965 BEGAINQ9BUH8 593 aa8.17□□□□□ -1.1
SNHG1-207ENST00000537965 PRKD2Q9BZL6 878 aa8.17□□□□□ -1.1
SNHG1-207ENST00000537965 V9GY48 417 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-207ENST00000537965 ZFYVE9O95405 1425 aa8.17□□□□□ -1.1
SNHG1-207ENST00000537965 FAM50AQ14320 339 aaKnown RBP8.16□□□□□ -1.1
SNHG1-207ENST00000537965 SHPRHQ149N8 1683 aa8.16□□□□□ -1.1
SNHG1-207ENST00000537965 RNF19BQ6ZMZ0 732 aa8.16□□□□□ -1.1
SNHG1-207ENST00000537965 COL16A1Q07092 1604 aaPredicted RBP8.15□□□□□ -1.1
SNHG1-207ENST00000537965 PPEF1O14829 653 aaPredicted RBP8.15□□□□□ -1.1
SNHG1-207ENST00000537965 E9PCH4 1651 aa8.14□□□□□ -1.11
SNHG1-207ENST00000537965 GUCA2AQ02747 115 aa8.14□□□□□ -1.11
SNHG1-207ENST00000537965 MSS51Q4VC12 460 aa8.14□□□□□ -1.11
SNHG1-207ENST00000537965 AHDC1Q5TGY3 1603 aaPredicted RBP8.14□□□□□ -1.11
SNHG1-207ENST00000537965 UNC13BO14795 1591 aa8.14□□□□□ -1.11
SNHG1-207ENST00000537965 TRPM2O94759 1503 aa8.13□□□□□ -1.11
SNHG1-207ENST00000537965 RXRBP28702 533 aa8.13□□□□□ -1.11
SNHG1-207ENST00000537965 DIXDC1Q155Q3 683 aa8.13□□□□□ -1.11
SNHG1-207ENST00000537965 USB1Q9BQ65 265 aaKnown RBP8.13□□□□□ -1.11
SNHG1-207ENST00000537965 DCCP43146 1447 aa8.12□□□□□ -1.11
SNHG1-207ENST00000537965 IQGAP3Q86VI3 1631 aa8.12□□□□□ -1.11
SNHG1-207ENST00000537965 FDX1P10109 184 aa8.12□□□□□ -1.11
SNHG1-207ENST00000537965 EMID1Q96A84 441 aaPredicted RBP8.12□□□□□ -1.11
SNHG1-207ENST00000537965 TBC1D2Q9BYX2 928 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms