RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 ZNF853P0CG23 659 aa15.31■□□□□ 0.04
SPARC-207ENST00000537849 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.31■□□□□ 0.04
SPARC-207ENST00000537849 TATP17735 454 aaPredicted RBP15.3■□□□□ 0.04
SPARC-207ENST00000537849 SPATA31A6Q5VVP1 1343 aa15.3■□□□□ 0.04
SPARC-207ENST00000537849 IL17REQ8NFR9 667 aa15.3■□□□□ 0.04
SPARC-207ENST00000537849 RAPGEF4Q8WZA2 1011 aa15.3■□□□□ 0.04
SPARC-207ENST00000537849 CALD1Q05682 793 aaKnown RBP15.29■□□□□ 0.04
SPARC-207ENST00000537849 MCM10Q7L590 875 aa15.29■□□□□ 0.04
SPARC-207ENST00000537849 MYH16Q9H6N6 1097 aa15.29■□□□□ 0.04
SPARC-207ENST00000537849 SUPT16HQ9Y5B9 1047 aaKnown RBP15.29■□□□□ 0.04
SPARC-207ENST00000537849 PLEKHG2Q9H7P9 1386 aa15.28■□□□□ 0.04
SPARC-207ENST00000537849 AKAP4Q5JQC9 854 aa15.28■□□□□ 0.04
SPARC-207ENST00000537849 ZNF530Q6P9A1 599 aaPredicted RBP15.28■□□□□ 0.04
SPARC-207ENST00000537849 IFT57Q9NWB7 429 aa15.28■□□□□ 0.04
SPARC-207ENST00000537849 MEGF6O75095 1541 aa15.27■□□□□ 0.04
SPARC-207ENST00000537849 SLIT2O94813 1529 aa15.27■□□□□ 0.04
SPARC-207ENST00000537849 CRB1P82279 1406 aa15.27■□□□□ 0.04
SPARC-207ENST00000537849 MAP3K5Q99683 1374 aa15.27■□□□□ 0.04
SPARC-207ENST00000537849 GNAI1P63096 354 aa15.27■□□□□ 0.04
SPARC-207ENST00000537849 RTF1Q92541 710 aaKnown RBP15.27■□□□□ 0.04
SPARC-207ENST00000537849 CFAP44Q96MT7 982 aa15.27■□□□□ 0.04
SPARC-207ENST00000537849 PLCH1Q4KWH8 1693 aa15.27■□□□□ 0.03
SPARC-207ENST00000537849 NRAPQ86VF7 1730 aa15.26■□□□□ 0.03
SPARC-207ENST00000537849 CHL1O00533 1208 aa15.26■□□□□ 0.03
SPARC-207ENST00000537849 FNBP4Q8N3X1 1017 aaPredicted RBP15.26■□□□□ 0.03
SPARC-207ENST00000537849 TSR2Q969E8 191 aaKnown RBP15.26■□□□□ 0.03
SPARC-207ENST00000537849 LGR6Q9HBX8 967 aa15.26■□□□□ 0.03
SPARC-207ENST00000537849 RCAN3Q9UKA8 241 aa15.26■□□□□ 0.03
SPARC-207ENST00000537849 SPG7Q9UQ90 795 aa15.26■□□□□ 0.03
SPARC-207ENST00000537849 NWD2Q9ULI1 1742 aa15.26■□□□□ 0.03
SPARC-207ENST00000537849 RNF123Q5XPI4 1314 aa15.25■□□□□ 0.03
SPARC-207ENST00000537849 FANCIQ9NVI1 1328 aa15.25■□□□□ 0.03
SPARC-207ENST00000537849 IL2RBP14784 551 aa15.25■□□□□ 0.03
SPARC-207ENST00000537849 NGLY1Q96IV0 654 aa15.25■□□□□ 0.03
SPARC-207ENST00000537849 LAS1LQ9Y4W2 734 aaKnown RBP15.25■□□□□ 0.03
SPARC-207ENST00000537849 OVOS2A0A0G2JMS6 1433 aa15.25■□□□□ 0.03
SPARC-207ENST00000537849 LRP6O75581 1613 aa15.25■□□□□ 0.03
SPARC-207ENST00000537849 VIRMAQ69YN4 1812 aaKnown RBP15.24■□□□□ 0.03
SPARC-207ENST00000537849 PKD1L3Q7Z443 1732 aa15.24■□□□□ 0.03
SPARC-207ENST00000537849 CYP27B1O15528 508 aa15.24■□□□□ 0.03
SPARC-207ENST00000537849 RNMTO43148 476 aaKnown RBP15.24■□□□□ 0.03
SPARC-207ENST00000537849 EXOSC9Q06265 439 aaKnown RBP15.24■□□□□ 0.03
SPARC-207ENST00000537849 UNC5CLQ8IV45 518 aa15.24■□□□□ 0.03
SPARC-207ENST00000537849 ZCRB1Q8TBF4 217 aaKnown RBP15.24■□□□□ 0.03
SPARC-207ENST00000537849 CEMIPQ8WUJ3 1361 aa15.24■□□□□ 0.03
SPARC-207ENST00000537849 PHKG2P15735 406 aa15.23■□□□□ 0.03
SPARC-207ENST00000537849 C1orf141Q5JVX7 400 aa15.23■□□□□ 0.03
SPARC-207ENST00000537849 MPRIPQ6WCQ1 1025 aa15.23■□□□□ 0.03
SPARC-207ENST00000537849 IFNL2Q8IZJ0 200 aa15.23■□□□□ 0.03
SPARC-207ENST00000537849 C8orf37Q96NL8 207 aa15.23■□□□□ 0.03
SPARC-207ENST00000537849 MBIPQ9NS73 344 aa15.23■□□□□ 0.03
SPARC-207ENST00000537849 SPATA31A1Q5TZJ5 1347 aa15.22■□□□□ 0.03
SPARC-207ENST00000537849 SPATA31A5Q5VU36 1347 aa15.22■□□□□ 0.03
SPARC-207ENST00000537849 SPATA31A7Q8IWB4 1347 aa15.22■□□□□ 0.03
SPARC-207ENST00000537849 BCL9LQ86UU0 1499 aa15.22■□□□□ 0.03
SPARC-207ENST00000537849 TAF7Q15545 349 aaPredicted RBP15.22■□□□□ 0.03
SPARC-207ENST00000537849 USP35Q9P2H5 1018 aa15.22■□□□□ 0.03
SPARC-207ENST00000537849 PARP4Q9UKK3 1724 aaKnown RBP15.22■□□□□ 0.03
SPARC-207ENST00000537849 DISP2A7MBM2 1401 aa15.21■□□□□ 0.03
SPARC-207ENST00000537849 BABAM1Q9NWV8 329 aa15.21■□□□□ 0.03
SPARC-207ENST00000537849 MIS18AQ9NYP9 233 aa15.21■□□□□ 0.03
SPARC-207ENST00000537849 THRAP3Q9Y2W1 955 aaKnown RBP15.21■□□□□ 0.03
SPARC-207ENST00000537849 ADAMTS7Q9UKP4 1686 aa15.21■□□□□ 0.03
SPARC-207ENST00000537849 CT47B1P0C2W7 299 aaPredicted RBP15.2■□□□□ 0.02
SPARC-207ENST00000537849 VPS72Q15906 364 aa15.2■□□□□ 0.02
SPARC-207ENST00000537849 SCN11AQ9UI33 1791 aa15.2■□□□□ 0.02
SPARC-207ENST00000537849 LRRC37A3O60309 1634 aa15.2■□□□□ 0.02
SPARC-207ENST00000537849 NKX1-1Q15270 411 aaPredicted RBP15.19■□□□□ 0.02
SPARC-207ENST00000537849 C8orf58Q8NAV2 365 aa15.19■□□□□ 0.02
SPARC-207ENST00000537849 GTF3C3Q9Y5Q9 886 aa15.19■□□□□ 0.02
SPARC-207ENST00000537849 SHANK3Q9BYB0 1731 aa15.18■□□□□ 0.02
SPARC-207ENST00000537849 VAMP4O75379 141 aa15.18■□□□□ 0.02
SPARC-207ENST00000537849 HSP90AB1P08238 724 aaKnown RBP15.18■□□□□ 0.02
SPARC-207ENST00000537849 RARSP54136 660 aaKnown RBP15.18■□□□□ 0.02
SPARC-207ENST00000537849 BARGINQ6ZT62 677 aa15.18■□□□□ 0.02
SPARC-207ENST00000537849 TSPYL6Q8N831 410 aa15.18■□□□□ 0.02
SPARC-207ENST00000537849 USP21Q9UK80 565 aa15.18■□□□□ 0.02
SPARC-207ENST00000537849 BCAR3O75815 825 aa15.17■□□□□ 0.02
SPARC-207ENST00000537849 DCAF5Q96JK2 942 aa15.17■□□□□ 0.02
SPARC-207ENST00000537849 CDCA7Q9BWT1 371 aaPredicted RBP15.17■□□□□ 0.02
SPARC-207ENST00000537849 TSPYL4Q9UJ04 414 aa15.17■□□□□ 0.02
SPARC-207ENST00000537849 KDM6AO15550 1401 aaPredicted RBP15.17■□□□□ 0.02
SPARC-207ENST00000537849 PCDH11XQ9BZA7 1347 aa15.17■□□□□ 0.02
SPARC-207ENST00000537849 PCDH11YQ9BZA8 1340 aa15.17■□□□□ 0.02
SPARC-207ENST00000537849 SIPA1L3O60292 1781 aaPredicted RBP15.16■□□□□ 0.02
SPARC-207ENST00000537849 WNK3Q9BYP7 1800 aa15.16■□□□□ 0.02
SPARC-207ENST00000537849 EXOC5O00471 708 aa15.16■□□□□ 0.02
SPARC-207ENST00000537849 TEFQ10587 303 aa15.16■□□□□ 0.02
SPARC-207ENST00000537849 MEX3CQ5U5Q3 659 aaKnown RBP15.16■□□□□ 0.02
SPARC-207ENST00000537849 DDX54Q8TDD1 881 aaKnown RBP15.16■□□□□ 0.02
SPARC-207ENST00000537849 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.15■□□□□ 0.02
SPARC-207ENST00000537849 RRP1P56182 461 aaKnown RBP15.15■□□□□ 0.02
SPARC-207ENST00000537849 FBXO41Q8TF61 875 aa15.15■□□□□ 0.02
SPARC-207ENST00000537849 CCDC9Q9Y3X0 531 aaKnown RBP15.15■□□□□ 0.02
SPARC-207ENST00000537849 AFF2P51816 1311 aa15.15■□□□□ 0.02
SPARC-207ENST00000537849 ELL2O00472 640 aaPredicted RBP15.14■□□□□ 0.01
SPARC-207ENST00000537849 KCNQ3O43525 872 aa15.14■□□□□ 0.01
SPARC-207ENST00000537849 KRT24Q2M2I5 525 aa15.14■□□□□ 0.01
SPARC-207ENST00000537849 NFATC2IPQ8NCF5 419 aa15.14■□□□□ 0.01
SPARC-207ENST00000537849 SLC52A2Q9HAB3 445 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms