RNA–Protein interactions for RNA: ENST00000537739.5

HDGF-210, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-210ENST00000537739 RTF1Q92541 710 aaKnown RBP33■■■□□ 2.87
HDGF-210ENST00000537739 ARHGAP45Q92619 1136 aa32.99■■■□□ 2.87
HDGF-210ENST00000537739 RWDD1Q9H446 243 aaPredicted RBP32.98■■■□□ 2.87
HDGF-210ENST00000537739 ZBTB40Q9NUA8 1239 aa32.98■■■□□ 2.87
HDGF-210ENST00000537739 NBPF6Q5VWK0 638 aa32.98■■■□□ 2.87
HDGF-210ENST00000537739 NBPF4Q96M43 638 aa32.98■■■□□ 2.87
HDGF-210ENST00000537739 TRPM3Q9HCF6 1732 aaPredicted RBP32.98■■■□□ 2.87
HDGF-210ENST00000537739 ATF3P18847 181 aa32.95■■■□□ 2.87
HDGF-210ENST00000537739 MST1RQ04912 1400 aa32.95■■■□□ 2.87
HDGF-210ENST00000537739 ARHGEF25Q86VW2 580 aa32.95■■■□□ 2.86
HDGF-210ENST00000537739 DDX17Q92841 729 aaKnown RBP32.94■■■□□ 2.86
HDGF-210ENST00000537739 KIAA0232Q92628 1395 aa32.94■■■□□ 2.86
HDGF-210ENST00000537739 SLIT3O75094 1523 aa32.94■■■□□ 2.86
HDGF-210ENST00000537739 KDM4FA0A1W2PPD8 638 aa32.93■■■□□ 2.86
HDGF-210ENST00000537739 GNAT3A8MTJ3 354 aa32.92■■■□□ 2.86
HDGF-210ENST00000537739 C8orf34Q49A92 452 aa32.92■■■□□ 2.86
HDGF-210ENST00000537739 MSH6P52701 1360 aa32.92■■■□□ 2.86
HDGF-210ENST00000537739 KIF1AQ12756 1690 aa32.92■■■□□ 2.86
HDGF-210ENST00000537739 HTATSF1O43719 755 aaKnown RBP32.92■■■□□ 2.86
HDGF-210ENST00000537739 PDZRN3Q9UPQ7 1066 aa32.92■■■□□ 2.86
HDGF-210ENST00000537739 USP19O94966 1318 aa32.92■■■□□ 2.86
HDGF-210ENST00000537739 LRRC59Q96AG4 307 aaKnown RBP32.91■■■□□ 2.86
HDGF-210ENST00000537739 IL17REQ8NFR9 667 aa32.9■■■□□ 2.86
HDGF-210ENST00000537739 TSPYL4Q9UJ04 414 aa32.9■■■□□ 2.86
HDGF-210ENST00000537739 PHRF1Q9P1Y6 1649 aaKnown RBP32.9■■■□□ 2.86
HDGF-210ENST00000537739 ABCC4O15439 1325 aa32.9■■■□□ 2.86
HDGF-210ENST00000537739 NPM2Q86SE8 214 aaKnown RBP32.9■■■□□ 2.86
HDGF-210ENST00000537739 ZBTB7BO15156 539 aaPredicted RBP32.89■■■□□ 2.86
HDGF-210ENST00000537739 FAM161AQ3B820 660 aa32.89■■■□□ 2.86
HDGF-210ENST00000537739 RGPD2P0DJD1 1756 aa32.89■■■□□ 2.86
HDGF-210ENST00000537739 ANP32AP39687 249 aaKnown RBP32.89■■■□□ 2.86
HDGF-210ENST00000537739 HDAC1Q13547 482 aaPredicted RBP32.89■■■□□ 2.86
HDGF-210ENST00000537739 MAP3K5Q99683 1374 aa32.86■■■□□ 2.85
HDGF-210ENST00000537739 AXIN2Q9Y2T1 843 aa32.86■■■□□ 2.85
HDGF-210ENST00000537739 NCOA3Q9Y6Q9 1424 aa32.85■■■□□ 2.85
HDGF-210ENST00000537739 LRRC37A3O60309 1634 aa32.85■■■□□ 2.85
HDGF-210ENST00000537739 DCCP43146 1447 aa32.84■■■□□ 2.85
HDGF-210ENST00000537739 API5Q9BZZ5 524 aaKnown RBP32.84■■■□□ 2.85
HDGF-210ENST00000537739 ALS2Q96Q42 1657 aa32.82■■■□□ 2.84
HDGF-210ENST00000537739 IPO9Q96P70 1041 aaKnown RBP32.81■■■□□ 2.84
HDGF-210ENST00000537739 LMTK3Q96Q04 1460 aa32.81■■■□□ 2.84
HDGF-210ENST00000537739 HAP1P54257 671 aaPredicted RBP32.81■■■□□ 2.84
HDGF-210ENST00000537739 CADPS2Q86UW7 1296 aa32.81■■■□□ 2.84
HDGF-210ENST00000537739 MED1Q15648 1581 aaPredicted RBP32.8■■■□□ 2.84
HDGF-210ENST00000537739 ANKRD24Q8TF21 1146 aa32.8■■■□□ 2.84
HDGF-210ENST00000537739 C1orf115Q9H7X2 142 aa32.8■■■□□ 2.84
HDGF-210ENST00000537739 RGS12O14924 1447 aa32.79■■■□□ 2.84
HDGF-210ENST00000537739 ZC3H6P61129 1189 aaKnown RBP32.79■■■□□ 2.84
HDGF-210ENST00000537739 STRCQ7RTU9 1775 aa32.78■■■□□ 2.84
HDGF-210ENST00000537739 SLC4A2P04920 1241 aa32.78■■■□□ 2.84
HDGF-210ENST00000537739 SMC5Q8IY18 1101 aa32.77■■■□□ 2.84
HDGF-210ENST00000537739 TAF7Q15545 349 aaPredicted RBP32.76■■■□□ 2.84
HDGF-210ENST00000537739 XIRP1Q702N8 1843 aaKnown RBP32.75■■■□□ 2.83
HDGF-210ENST00000537739 LGR6Q9HBX8 967 aa32.75■■■□□ 2.83
HDGF-210ENST00000537739 G2E3Q7L622 706 aa32.74■■■□□ 2.83
HDGF-210ENST00000537739 NCAPD2Q15021 1401 aa32.73■■■□□ 2.83
HDGF-210ENST00000537739 INTS3Q68E01 1043 aaKnown RBP32.73■■■□□ 2.83
HDGF-210ENST00000537739 RGPD5Q99666 1765 aa32.72■■■□□ 2.83
HDGF-210ENST00000537739 CEMIPQ8WUJ3 1361 aa32.72■■■□□ 2.83
HDGF-210ENST00000537739 CABLES1Q8TDN4 633 aa32.72■■■□□ 2.83
HDGF-210ENST00000537739 SIRT2Q8IXJ6 389 aa32.71■■■□□ 2.83
HDGF-210ENST00000537739 CHMP4BQ9H444 224 aaKnown RBP32.71■■■□□ 2.83
HDGF-210ENST00000537739 NPHP3Q7Z494 1330 aa32.7■■■□□ 2.83
HDGF-210ENST00000537739 ANP32EQ9BTT0 268 aa32.7■■■□□ 2.83
HDGF-210ENST00000537739 PTPRCP08575 1304 aa32.7■■■□□ 2.82
HDGF-210ENST00000537739 ZNF530Q6P9A1 599 aaPredicted RBP32.69■■■□□ 2.82
HDGF-210ENST00000537739 NOP58Q9Y2X3 529 aaKnown RBP32.69■■■□□ 2.82
HDGF-210ENST00000537739 PLEKHO1Q53GL0 409 aaPredicted RBP32.68■■■□□ 2.82
HDGF-210ENST00000537739 BABAM1Q9NWV8 329 aa32.68■■■□□ 2.82
HDGF-210ENST00000537739 ZNF335Q9H4Z2 1342 aaPredicted RBP32.67■■■□□ 2.82
HDGF-210ENST00000537739 PXDNQ92626 1479 aa32.67■■■□□ 2.82
HDGF-210ENST00000537739 AKAP4Q5JQC9 854 aa32.66■■■□□ 2.82
HDGF-210ENST00000537739 NECTIN2Q92692 538 aa32.66■■■□□ 2.82
HDGF-210ENST00000537739 ERBB3P21860 1342 aa32.66■■■□□ 2.82
HDGF-210ENST00000537739 MPRIPQ6WCQ1 1025 aa32.65■■■□□ 2.82
HDGF-210ENST00000537739 SEC24BO95487 1268 aa32.65■■■□□ 2.82
HDGF-210ENST00000537739 BRINP3Q76B58 766 aa32.65■■■□□ 2.82
HDGF-210ENST00000537739 TNS3Q68CZ2 1445 aa32.64■■■□□ 2.82
HDGF-210ENST00000537739 NUCB1Q02818 461 aa32.64■■■□□ 2.82
HDGF-210ENST00000537739 SPATA31A3Q5VYP0 1347 aa32.64■■■□□ 2.82
HDGF-210ENST00000537739 CAMTA1Q9Y6Y1 1673 aa32.64■■■□□ 2.82
HDGF-210ENST00000537739 AMOTQ4VCS5 1084 aa32.63■■■□□ 2.81
HDGF-210ENST00000537739 F6X3S4 739 aa32.63■■■□□ 2.81
HDGF-210ENST00000537739 LMO7Q8WWI1 1683 aa32.62■■■□□ 2.81
HDGF-210ENST00000537739 VIRMAQ69YN4 1812 aaKnown RBP32.62■■■□□ 2.81
HDGF-210ENST00000537739 ERICH6Q7L0X2 663 aa32.62■■■□□ 2.81
HDGF-210ENST00000537739 ZBTB47Q9UFB7 747 aaPredicted RBP32.62■■■□□ 2.81
HDGF-210ENST00000537739 CCDC30Q5VVM6 783 aa32.61■■■□□ 2.81
HDGF-210ENST00000537739 KCNQ3O43525 872 aa32.6■■■□□ 2.81
HDGF-210ENST00000537739 STK31Q9BXU1 1019 aa32.6■■■□□ 2.81
HDGF-210ENST00000537739 CHRNA2Q15822 529 aa32.59■■■□□ 2.81
HDGF-210ENST00000537739 COL18A1P39060 1754 aa32.59■■■□□ 2.81
HDGF-210ENST00000537739 LNPKQ9C0E8 428 aa32.58■■■□□ 2.81
HDGF-210ENST00000537739 RNMTO43148 476 aaKnown RBP32.58■■■□□ 2.81
HDGF-210ENST00000537739 EIF4A1P60842 406 aaKnown RBP32.57■■■□□ 2.8
HDGF-210ENST00000537739 CHD1LQ86WJ1 897 aa32.57■■■□□ 2.8
HDGF-210ENST00000537739 MEIS3Q99687 375 aa32.57■■■□□ 2.8
HDGF-210ENST00000537739 FAM208AQ9UK61 1670 aaKnown RBP32.56■■■□□ 2.8
HDGF-210ENST00000537739 C1orf141Q5JVX7 400 aa32.56■■■□□ 2.8
HDGF-210ENST00000537739 SLC4A10Q6U841 1118 aa32.56■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms