RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 GAS2L2Q8NHY3 880 aa15.03■□□□□ -0
CPSF7-218ENST00000537641 TPM2P07951 284 aa15.03■□□□□ -0
CPSF7-218ENST00000537641 SSFA2P28290 1259 aa15.03■□□□□ -0
CPSF7-218ENST00000537641 NUCB2P80303 420 aa15.03■□□□□ -0
CPSF7-218ENST00000537641 C1orf115Q9H7X2 142 aa15.03■□□□□ -0
CPSF7-218ENST00000537641 EID1Q9Y6B2 187 aa15.03■□□□□ -0
CPSF7-218ENST00000537641 BAG4O95429 457 aaKnown RBP15.02□□□□□ -0.01
CPSF7-218ENST00000537641 IL13P35225 146 aa15.02□□□□□ -0.01
CPSF7-218ENST00000537641 TWISTNBQ3B726 338 aaPredicted RBP15.02□□□□□ -0.01
CPSF7-218ENST00000537641 MBIPQ9NS73 344 aa15.02□□□□□ -0.01
CPSF7-218ENST00000537641 EMILIN1Q9Y6C2 1016 aa15.02□□□□□ -0.01
CPSF7-218ENST00000537641 RIMS1Q86UR5 1692 aaKnown RBP15.02□□□□□ -0.01
CPSF7-218ENST00000537641 NCKAP5LQ9HCH0 1330 aa15.01□□□□□ -0.01
CPSF7-218ENST00000537641 FBLN1P23142 703 aa15.01□□□□□ -0.01
CPSF7-218ENST00000537641 PTPRUQ92729 1446 aa15.01□□□□□ -0.01
CPSF7-218ENST00000537641 GSPT1P15170 499 aaKnown RBP15□□□□□ -0.01
CPSF7-218ENST00000537641 ZNF445P59923 1031 aa15□□□□□ -0.01
CPSF7-218ENST00000537641 TTC22Q5TAA0 569 aa15□□□□□ -0.01
CPSF7-218ENST00000537641 PLEKHM2Q8IWE5 1019 aa15□□□□□ -0.01
CPSF7-218ENST00000537641 TSPYL6Q8N831 410 aa15□□□□□ -0.01
CPSF7-218ENST00000537641 ANP32BQ92688 251 aaKnown RBP15□□□□□ -0.01
CPSF7-218ENST00000537641 DCTPP1Q9H773 170 aa15□□□□□ -0.01
CPSF7-218ENST00000537641 PLEKHG3A1L390 1219 aa15□□□□□ -0.01
CPSF7-218ENST00000537641 CYP2E1P05181 493 aaPredicted RBP15□□□□□ -0.01
CPSF7-218ENST00000537641 NASPP49321 788 aaPredicted RBP15□□□□□ -0.01
CPSF7-218ENST00000537641 CEBPAP49715 358 aaPredicted RBP15□□□□□ -0.01
CPSF7-218ENST00000537641 HAP1P54257 671 aaPredicted RBP15□□□□□ -0.01
CPSF7-218ENST00000537641 PHACTR3Q96KR7 559 aa15□□□□□ -0.01
CPSF7-218ENST00000537641 RBM42Q9BTD8 480 aaKnown RBP15□□□□□ -0.01
CPSF7-218ENST00000537641 ZRANB1Q9UGI0 708 aa15□□□□□ -0.01
CPSF7-218ENST00000537641 ATP10DQ9P241 1426 aa14.99□□□□□ -0.01
CPSF7-218ENST00000537641 INTS3Q68E01 1043 aaKnown RBP14.99□□□□□ -0.01
CPSF7-218ENST00000537641 CWC22Q9HCG8 908 aaKnown RBP14.99□□□□□ -0.01
CPSF7-218ENST00000537641 FOXD4L1Q9NU39 408 aa14.99□□□□□ -0.01
CPSF7-218ENST00000537641 DDX49Q9Y6V7 483 aaKnown RBP14.99□□□□□ -0.01
CPSF7-218ENST00000537641 OVOS2A0A0J9YW53 1432 aa14.99□□□□□ -0.01
CPSF7-218ENST00000537641 OVOS2Q6IE36 1432 aa14.99□□□□□ -0.01
CPSF7-218ENST00000537641 XRN1Q8IZH2 1706 aaKnown RBP14.98□□□□□ -0.01
CPSF7-218ENST00000537641 USP6P35125 1406 aa14.98□□□□□ -0.01
CPSF7-218ENST00000537641 HMOX1P09601 288 aa14.97□□□□□ -0.01
CPSF7-218ENST00000537641 HSP90AA2PQ14568 343 aaPredicted RBP14.97□□□□□ -0.01
CPSF7-218ENST00000537641 ANKRD44Q8N8A2 993 aa14.97□□□□□ -0.01
CPSF7-218ENST00000537641 TBX22Q9Y458 520 aa14.97□□□□□ -0.01
CPSF7-218ENST00000537641 TTC21BQ7Z4L5 1316 aa14.97□□□□□ -0.01
CPSF7-218ENST00000537641 HS1BP3Q53T59 392 aa14.97□□□□□ -0.01
CPSF7-218ENST00000537641 ZSCAN30Q86W11 494 aa14.97□□□□□ -0.01
CPSF7-218ENST00000537641 RPAP2Q8IXW5 612 aaPredicted RBP14.97□□□□□ -0.01
CPSF7-218ENST00000537641 THUMPD2Q9BTF0 503 aaKnown RBP14.97□□□□□ -0.01
CPSF7-218ENST00000537641 USP26Q9BXU7 913 aa14.97□□□□□ -0.01
CPSF7-218ENST00000537641 ACEP12821 1306 aa14.96□□□□□ -0.01
CPSF7-218ENST00000537641 FMN2Q9NZ56 1722 aa14.96□□□□□ -0.01
CPSF7-218ENST00000537641 CASC1Q6TDU7 716 aa14.96□□□□□ -0.01
CPSF7-218ENST00000537641 SLC26A8Q96RN1 970 aa14.96□□□□□ -0.01
CPSF7-218ENST00000537641 RGS12O14924 1447 aa14.96□□□□□ -0.01
CPSF7-218ENST00000537641 RGPD8O14715 1765 aaPredicted RBP14.96□□□□□ -0.02
CPSF7-218ENST00000537641 RGPD1P0DJD0 1748 aa14.95□□□□□ -0.02
CPSF7-218ENST00000537641 RRS1Q15050 365 aaKnown RBP14.95□□□□□ -0.02
CPSF7-218ENST00000537641 THEMISQ8N1K5 641 aaPredicted RBP14.95□□□□□ -0.02
CPSF7-218ENST00000537641 AK9Q5TCS8 1911 aa14.95□□□□□ -0.02
CPSF7-218ENST00000537641 SSH2Q76I76 1423 aa14.95□□□□□ -0.02
CPSF7-218ENST00000537641 TERF1P54274 439 aa14.95□□□□□ -0.02
CPSF7-218ENST00000537641 C8orf58Q8NAV2 365 aa14.95□□□□□ -0.02
CPSF7-218ENST00000537641 AMOTL2Q9Y2J4 779 aa14.95□□□□□ -0.02
CPSF7-218ENST00000537641 PEAK1Q9H792 1746 aa14.94□□□□□ -0.02
CPSF7-218ENST00000537641 KIAA0232Q92628 1395 aa14.94□□□□□ -0.02
CPSF7-218ENST00000537641 ST18O60284 1047 aa14.94□□□□□ -0.02
CPSF7-218ENST00000537641 LMBRD1Q9NUN5 540 aa14.94□□□□□ -0.02
CPSF7-218ENST00000537641 PTPRCP08575 1304 aa14.93□□□□□ -0.02
CPSF7-218ENST00000537641 TUBGCP6Q96RT7 1819 aa14.93□□□□□ -0.02
CPSF7-218ENST00000537641 USP31Q70CQ4 1352 aa14.93□□□□□ -0.02
CPSF7-218ENST00000537641 MCTP1Q6DN14 999 aa14.92□□□□□ -0.02
CPSF7-218ENST00000537641 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.92□□□□□ -0.02
CPSF7-218ENST00000537641 CEP170BQ9Y4F5 1589 aaPredicted RBP14.92□□□□□ -0.02
CPSF7-218ENST00000537641 TTC21AQ8NDW8 1320 aa14.92□□□□□ -0.02
CPSF7-218ENST00000537641 RTL1A6NKG5 1358 aa14.92□□□□□ -0.02
CPSF7-218ENST00000537641 ELL2O00472 640 aaPredicted RBP14.92□□□□□ -0.02
CPSF7-218ENST00000537641 REC8O95072 547 aa14.92□□□□□ -0.02
CPSF7-218ENST00000537641 MSNP26038 577 aaKnown RBP14.92□□□□□ -0.02
CPSF7-218ENST00000537641 CEP85Q6P2H3 762 aa14.92□□□□□ -0.02
CPSF7-218ENST00000537641 OFD1O75665 1012 aa14.91□□□□□ -0.02
CPSF7-218ENST00000537641 ZSCAN23Q3MJ62 389 aa14.91□□□□□ -0.02
CPSF7-218ENST00000537641 SDSP20132 328 aa14.9□□□□□ -0.02
CPSF7-218ENST00000537641 PDLIM2Q96JY6 352 aa14.9□□□□□ -0.02
CPSF7-218ENST00000537641 MSH6P52701 1360 aa14.9□□□□□ -0.02
CPSF7-218ENST00000537641 ANKARQ7Z5J8 1434 aa14.9□□□□□ -0.02
CPSF7-218ENST00000537641 EIF4A2Q14240 407 aaKnown RBP14.89□□□□□ -0.03
CPSF7-218ENST00000537641 CAVIN1Q6NZI2 390 aaKnown RBP14.89□□□□□ -0.03
CPSF7-218ENST00000537641 PIK3C2AO00443 1686 aa14.89□□□□□ -0.03
CPSF7-218ENST00000537641 USP54Q70EL1 1684 aa14.89□□□□□ -0.03
CPSF7-218ENST00000537641 ZNF142P52746 1687 aaPredicted RBP14.89□□□□□ -0.03
CPSF7-218ENST00000537641 NUTM2FA1L443 756 aa14.89□□□□□ -0.03
CPSF7-218ENST00000537641 OSBPL3Q9H4L5 887 aa14.89□□□□□ -0.03
CPSF7-218ENST00000537641 N4BP2Q86UW6 1770 aaPredicted RBP14.88□□□□□ -0.03
CPSF7-218ENST00000537641 ERC2O15083 957 aa14.88□□□□□ -0.03
CPSF7-218ENST00000537641 HMMRO75330 724 aa14.87□□□□□ -0.03
CPSF7-218ENST00000537641 MCM2P49736 904 aa14.87□□□□□ -0.03
CPSF7-218ENST00000537641 KIAA1211Q6ZU35 1233 aa14.87□□□□□ -0.03
CPSF7-218ENST00000537641 CHL1O00533 1208 aa14.86□□□□□ -0.03
CPSF7-218ENST00000537641 ZNF500O60304 480 aaPredicted RBP14.86□□□□□ -0.03
CPSF7-218ENST00000537641 MBD3O95983 291 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms