RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 TOGARAM1Q9Y4F4 1720 aa24.9■■□□□ 1.58
LTBR-206ENST00000536876 SLC27A3Q5K4L6 730 aa24.9■■□□□ 1.58
LTBR-206ENST00000536876 PUS7Q96PZ0 661 aaKnown RBP24.9■■□□□ 1.58
LTBR-206ENST00000536876 KIF20BQ96Q89 1820 aa24.89■■□□□ 1.58
LTBR-206ENST00000536876 HOXC9P31274 260 aa24.89■■□□□ 1.58
LTBR-206ENST00000536876 PRIM1P49642 420 aaKnown RBP24.87■■□□□ 1.57
LTBR-206ENST00000536876 SLC16A10Q8TF71 515 aa24.87■■□□□ 1.57
LTBR-206ENST00000536876 NLGN2Q8NFZ4 835 aa24.86■■□□□ 1.57
LTBR-206ENST00000536876 RTL1A6NKG5 1358 aa24.85■■□□□ 1.57
LTBR-206ENST00000536876 ITGB4P16144 1822 aa24.84■■□□□ 1.57
LTBR-206ENST00000536876 TONSLQ96HA7 1378 aa24.83■■□□□ 1.57
LTBR-206ENST00000536876 SYTL4Q96C24 671 aaPredicted RBP24.83■■□□□ 1.57
LTBR-206ENST00000536876 C1QTNF8P60827 252 aa24.82■■□□□ 1.56
LTBR-206ENST00000536876 PKD1L3Q7Z443 1732 aa24.82■■□□□ 1.56
LTBR-206ENST00000536876 COG3Q96JB2 828 aa24.82■■□□□ 1.56
LTBR-206ENST00000536876 GPR162Q16538 588 aa24.81■■□□□ 1.56
LTBR-206ENST00000536876 KLHL34Q8N239 644 aa24.81■■□□□ 1.56
LTBR-206ENST00000536876 ZCRB1Q8TBF4 217 aaKnown RBP24.81■■□□□ 1.56
LTBR-206ENST00000536876 TFCP2L1Q9NZI6 479 aa24.81■■□□□ 1.56
LTBR-206ENST00000536876 ST20-MTHFSA0A0A6YYL1 179 aa24.8■■□□□ 1.56
LTBR-206ENST00000536876 POLD1P28340 1107 aa24.8■■□□□ 1.56
LTBR-206ENST00000536876 ANKRD26Q9UPS8 1709 aa24.79■■□□□ 1.56
LTBR-206ENST00000536876 NBPF6Q5VWK0 638 aa24.79■■□□□ 1.56
LTBR-206ENST00000536876 NBPF4Q96M43 638 aa24.79■■□□□ 1.56
LTBR-206ENST00000536876 SENP3-EIF4A1A0A087X0R7 540 aa24.78■■□□□ 1.56
LTBR-206ENST00000536876 AMPHP49418 695 aa24.78■■□□□ 1.56
LTBR-206ENST00000536876 RRS1Q15050 365 aaKnown RBP24.78■■□□□ 1.56
LTBR-206ENST00000536876 USHBP1Q8N6Y0 703 aa24.78■■□□□ 1.56
LTBR-206ENST00000536876 UBR3Q6ZT12 1888 aa24.78■■□□□ 1.56
LTBR-206ENST00000536876 CCNL1Q9UK58 526 aaPredicted RBP24.77■■□□□ 1.56
LTBR-206ENST00000536876 CEP350Q5VT06 3117 aa24.77■■□□□ 1.56
LTBR-206ENST00000536876 C4BP0C0L5 1744 aa24.77■■□□□ 1.56
LTBR-206ENST00000536876 YBX3P16989 372 aaKnown RBP eCLIP24.76■■□□□ 1.556e-11■■□□□ 12.3
LTBR-206ENST00000536876 COL23A1Q86Y22 540 aaPredicted RBP24.76■■□□□ 1.55
LTBR-206ENST00000536876 MAP2P11137 1827 aaKnown RBP24.76■■□□□ 1.55
LTBR-206ENST00000536876 USP47Q96K76 1375 aa24.74■■□□□ 1.55
LTBR-206ENST00000536876 FYB1O15117 783 aa24.73■■□□□ 1.55
LTBR-206ENST00000536876 PELP1Q8IZL8 1130 aaKnown RBP24.73■■□□□ 1.55
LTBR-206ENST00000536876 GGNBP2Q9H3C7 697 aa24.72■■□□□ 1.55
LTBR-206ENST00000536876 NCAPD2Q15021 1401 aa24.71■■□□□ 1.55
LTBR-206ENST00000536876 MSL1Q68DK7 614 aa24.71■■□□□ 1.55
LTBR-206ENST00000536876 SMG6Q86US8 1419 aaKnown RBP24.7■■□□□ 1.55
LTBR-206ENST00000536876 INSRP06213 1382 aa24.7■■□□□ 1.55
LTBR-206ENST00000536876 CGNL1Q0VF96 1302 aa24.7■■□□□ 1.54
LTBR-206ENST00000536876 AMIGO3Q86WK7 504 aa24.69■■□□□ 1.54
LTBR-206ENST00000536876 PALLDQ8WX93 1383 aa24.68■■□□□ 1.54
LTBR-206ENST00000536876 GIGYF1O75420 1035 aaPredicted RBP24.68■■□□□ 1.54
LTBR-206ENST00000536876 HSP90AB2PQ58FF8 381 aa24.68■■□□□ 1.54
LTBR-206ENST00000536876 FLT4P35916 1363 aa24.67■■□□□ 1.54
LTBR-206ENST00000536876 PCDH11XQ9BZA7 1347 aa24.66■■□□□ 1.54
LTBR-206ENST00000536876 PCDH11YQ9BZA8 1340 aa24.66■■□□□ 1.54
LTBR-206ENST00000536876 CYP27B1O15528 508 aa24.65■■□□□ 1.54
LTBR-206ENST00000536876 RAPGEF4Q8WZA2 1011 aa24.65■■□□□ 1.54
LTBR-206ENST00000536876 KIF24Q5T7B8 1368 aa24.65■■□□□ 1.54
LTBR-206ENST00000536876 ATP10DQ9P241 1426 aa24.64■■□□□ 1.54
LTBR-206ENST00000536876 MSH5O43196 834 aa24.64■■□□□ 1.54
LTBR-206ENST00000536876 ADCY9O60503 1353 aa24.64■■□□□ 1.53
LTBR-206ENST00000536876 KIAA1551Q9HCM1 1747 aa24.64■■□□□ 1.53
LTBR-206ENST00000536876 TATP17735 454 aaPredicted RBP24.63■■□□□ 1.53
LTBR-206ENST00000536876 SMIM5Q71RC9 77 aa24.6■■□□□ 1.53
LTBR-206ENST00000536876 GRIN3BO60391 1043 aa24.59■■□□□ 1.53
LTBR-206ENST00000536876 MPRIPQ6WCQ1 1025 aa24.59■■□□□ 1.53
LTBR-206ENST00000536876 EMILIN1Q9Y6C2 1016 aa24.59■■□□□ 1.53
LTBR-206ENST00000536876 CICQ96RK0 1608 aaPredicted RBP24.59■■□□□ 1.53
LTBR-206ENST00000536876 NSD3Q9BZ95 1437 aa24.59■■□□□ 1.53
LTBR-206ENST00000536876 KIF13BQ9NQT8 1826 aa24.58■■□□□ 1.53
LTBR-206ENST00000536876 TMF1P82094 1093 aa24.58■■□□□ 1.53
LTBR-206ENST00000536876 CARD14Q9BXL6 1004 aa24.58■■□□□ 1.53
LTBR-206ENST00000536876 CD2APQ9Y5K6 639 aa24.58■■□□□ 1.53
LTBR-206ENST00000536876 SLC24A1O60721 1099 aa24.57■■□□□ 1.52
LTBR-206ENST00000536876 PIGBQ92521 554 aa24.54■■□□□ 1.52
LTBR-206ENST00000536876 COL5A3P25940 1745 aaPredicted RBP24.54■■□□□ 1.52
LTBR-206ENST00000536876 NKX1-1Q15270 411 aaPredicted RBP24.53■■□□□ 1.52
LTBR-206ENST00000536876 LINC00116Q8NCU8 138 aa24.53■■□□□ 1.52
LTBR-206ENST00000536876 FLAD1Q8NFF5 587 aa24.53■■□□□ 1.52
LTBR-206ENST00000536876 ZNF831Q5JPB2 1677 aa24.52■■□□□ 1.52
LTBR-206ENST00000536876 N4BP2Q86UW6 1770 aaPredicted RBP24.52■■□□□ 1.52
LTBR-206ENST00000536876 AK7Q96M32 723 aa24.51■■□□□ 1.51
LTBR-206ENST00000536876 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.5■■□□□ 1.51
LTBR-206ENST00000536876 PHF14O94880 888 aa24.5■■□□□ 1.51
LTBR-206ENST00000536876 SMARCC1Q92922 1105 aaPredicted RBP24.5■■□□□ 1.51
LTBR-206ENST00000536876 IGSF1Q8N6C5 1336 aa24.5■■□□□ 1.51
LTBR-206ENST00000536876 C4AP0C0L4 1744 aa24.49■■□□□ 1.51
LTBR-206ENST00000536876 BRCA1P38398 1863 aaKnown RBP24.49■■□□□ 1.51
LTBR-206ENST00000536876 KDRP35968 1356 aa24.49■■□□□ 1.51
LTBR-206ENST00000536876 ITPK1Q13572 414 aa24.48■■□□□ 1.51
LTBR-206ENST00000536876 LOC102724428A0A0B4J2F2 783 aa24.47■■□□□ 1.51
LTBR-206ENST00000536876 SIK1P57059 783 aa24.47■■□□□ 1.51
LTBR-206ENST00000536876 WWC3Q9ULE0 1092 aa24.47■■□□□ 1.51
LTBR-206ENST00000536876 WASHC2AQ641Q2 1341 aa24.46■■□□□ 1.51
LTBR-206ENST00000536876 SSFA2P28290 1259 aa24.46■■□□□ 1.51
LTBR-206ENST00000536876 EYA1Q99502 592 aa24.46■■□□□ 1.51
LTBR-206ENST00000536876 PXDNLA1KZ92 1463 aa24.45■■□□□ 1.51
LTBR-206ENST00000536876 ASAP1Q9ULH1 1129 aa24.45■■□□□ 1.5
LTBR-206ENST00000536876 MYH14Q7Z406 1995 aaKnown RBP24.44■■□□□ 1.5
LTBR-206ENST00000536876 CDCA8Q53HL2 280 aa24.43■■□□□ 1.5
LTBR-206ENST00000536876 GPBP1L1Q9HC44 474 aaPredicted RBP24.43■■□□□ 1.5
LTBR-206ENST00000536876 SPG7Q9UQ90 795 aa24.43■■□□□ 1.5
LTBR-206ENST00000536876 PPM1GO15355 546 aaPredicted RBP24.42■■□□□ 1.5
LTBR-206ENST00000536876 PHKG2P15735 406 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms