RNA–Protein interactions for RNA: ENST00000536566.5

RAB6A-204, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB6A, Length 1,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-204ENST00000536566 MARCH10Q8NA82 808 aaPredicted RBP29.56■■■□□ 2.32
RAB6A-204ENST00000536566 ZCRB1Q8TBF4 217 aaKnown RBP29.55■■■□□ 2.32
RAB6A-204ENST00000536566 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.55■■■□□ 2.325e-7■□□□□ 10.6
RAB6A-204ENST00000536566 FAM182BQ5T319 152 aa29.52■■■□□ 2.32
RAB6A-204ENST00000536566 PRKRIP1Q9H875 184 aaPredicted RBP29.5■■■□□ 2.31
RAB6A-204ENST00000536566 MYBBP1AQ9BQG0 1328 aaKnown RBP29.49■■■□□ 2.31
RAB6A-204ENST00000536566 PCDH11XQ9BZA7 1347 aa29.48■■■□□ 2.31
RAB6A-204ENST00000536566 PCDH11YQ9BZA8 1340 aa29.48■■■□□ 2.31
RAB6A-204ENST00000536566 SULT6B1Q6IMI4 303 aa29.48■■■□□ 2.31
RAB6A-204ENST00000536566 SPG7Q9UQ90 795 aa29.48■■■□□ 2.31
RAB6A-204ENST00000536566 PKD1L3Q7Z443 1732 aa29.48■■■□□ 2.31
RAB6A-204ENST00000536566 NUDCQ9Y266 331 aa29.47■■■□□ 2.31
RAB6A-204ENST00000536566 SHANK3Q9BYB0 1731 aa29.45■■■□□ 2.31
RAB6A-204ENST00000536566 AEBP1Q8IUX7 1158 aa29.45■■■□□ 2.31
RAB6A-204ENST00000536566 DDX54Q8TDD1 881 aaKnown RBP29.45■■■□□ 2.31
RAB6A-204ENST00000536566 AMOTQ4VCS5 1084 aa29.44■■■□□ 2.3
RAB6A-204ENST00000536566 SF3B2Q13435 895 aaKnown RBP29.43■■■□□ 2.3
RAB6A-204ENST00000536566 U2SURPO15042 1029 aaKnown RBP29.41■■■□□ 2.3
RAB6A-204ENST00000536566 PLEKHO1Q53GL0 409 aaPredicted RBP29.41■■■□□ 2.3
RAB6A-204ENST00000536566 BCL11BQ9C0K0 894 aaPredicted RBP29.41■■■□□ 2.3
RAB6A-204ENST00000536566 CYP27B1O15528 508 aa29.4■■■□□ 2.3
RAB6A-204ENST00000536566 TRIM37O94972 964 aa29.4■■■□□ 2.3
RAB6A-204ENST00000536566 NKX1-1Q15270 411 aaPredicted RBP29.39■■■□□ 2.3
RAB6A-204ENST00000536566 TNS1Q9HBL0 1735 aaKnown RBP29.37■■■□□ 2.29
RAB6A-204ENST00000536566 SBF2Q86WG5 1849 aa29.37■■■□□ 2.29
RAB6A-204ENST00000536566 HMOX1P09601 288 aa29.37■■■□□ 2.29
RAB6A-204ENST00000536566 IFNL2Q8IZJ0 200 aa29.37■■■□□ 2.29
RAB6A-204ENST00000536566 BAG6P46379 1132 aa29.36■■■□□ 2.29
RAB6A-204ENST00000536566 NHSQ6T4R5 1651 aa29.34■■■□□ 2.29
RAB6A-204ENST00000536566 FCHSD2O94868 740 aa29.34■■■□□ 2.29
RAB6A-204ENST00000536566 PHKG2P15735 406 aa29.34■■■□□ 2.29
RAB6A-204ENST00000536566 U2AF1L5P0DN76 240 aaPredicted RBP29.33■■■□□ 2.29
RAB6A-204ENST00000536566 U2AF1Q01081 240 aaKnown RBP eCLIP29.33■■■□□ 2.294e-9■■□□□ 12.7
RAB6A-204ENST00000536566 ANP32CO43423 234 aa29.32■■■□□ 2.28
RAB6A-204ENST00000536566 HSP90AB1P08238 724 aaKnown RBP29.32■■■□□ 2.28
RAB6A-204ENST00000536566 RSPH6AQ9H0K4 717 aa29.32■■■□□ 2.28
RAB6A-204ENST00000536566 PLSCR1O15162 318 aa29.3■■■□□ 2.28
RAB6A-204ENST00000536566 APBA3O96018 575 aa29.3■■■□□ 2.28
RAB6A-204ENST00000536566 KCNQ2O43526 872 aa29.29■■■□□ 2.28
RAB6A-204ENST00000536566 ZNF530Q6P9A1 599 aaPredicted RBP29.29■■■□□ 2.28
RAB6A-204ENST00000536566 ACSBG1Q96GR2 724 aa29.29■■■□□ 2.28
RAB6A-204ENST00000536566 C1orf141Q5JVX7 400 aa29.27■■■□□ 2.28
RAB6A-204ENST00000536566 DEFB132Q7Z7B7 95 aa29.27■■■□□ 2.28
RAB6A-204ENST00000536566 DCAF5Q96JK2 942 aa29.27■■■□□ 2.28
RAB6A-204ENST00000536566 DOT1LQ8TEK3 1739 aa29.26■■■□□ 2.27
RAB6A-204ENST00000536566 PRKAR2BP31323 418 aa29.26■■■□□ 2.27
RAB6A-204ENST00000536566 PRIM1P49642 420 aaKnown RBP29.26■■■□□ 2.27
RAB6A-204ENST00000536566 AKAP4Q5JQC9 854 aa29.26■■■□□ 2.27
RAB6A-204ENST00000536566 PTF1AQ7RTS3 328 aa29.26■■■□□ 2.27
RAB6A-204ENST00000536566 RGPD3A6NKT7 1758 aaPredicted RBP29.26■■■□□ 2.27
RAB6A-204ENST00000536566 RGPD4Q7Z3J3 1758 aa29.26■■■□□ 2.27
RAB6A-204ENST00000536566 CAMKK2Q96RR4 588 aa29.25■■■□□ 2.27
RAB6A-204ENST00000536566 PNNQ9H307 717 aaKnown RBP29.25■■■□□ 2.27
RAB6A-204ENST00000536566 EN1Q05925 392 aaPredicted RBP29.24■■■□□ 2.27
RAB6A-204ENST00000536566 MTHFSDQ2M296 383 aaKnown RBP29.24■■■□□ 2.27
RAB6A-204ENST00000536566 GAS2L2Q8NHY3 880 aa29.24■■■□□ 2.27
RAB6A-204ENST00000536566 ERVV-2B6SEH9 535 aa29.22■■■□□ 2.27
RAB6A-204ENST00000536566 SYTL4Q96C24 671 aaPredicted RBP29.21■■■□□ 2.27
RAB6A-204ENST00000536566 TOGARAM1Q9Y4F4 1720 aa29.2■■■□□ 2.27
RAB6A-204ENST00000536566 PHACTR3Q96KR7 559 aa29.2■■■□□ 2.26
RAB6A-204ENST00000536566 KDM6AO15550 1401 aaPredicted RBP29.2■■■□□ 2.26
RAB6A-204ENST00000536566 BTAF1O14981 1849 aa29.18■■■□□ 2.26
RAB6A-204ENST00000536566 EZH2Q15910 746 aaKnown RBP29.18■■■□□ 2.26
RAB6A-204ENST00000536566 NEFMP07197 916 aa29.17■■■□□ 2.26
RAB6A-204ENST00000536566 PLEKHF1Q96S99 279 aa29.17■■■□□ 2.26
RAB6A-204ENST00000536566 WDR43Q15061 677 aaKnown RBP eCLIP29.16■■■□□ 2.26
RAB6A-204ENST00000536566 MPRIPQ6WCQ1 1025 aa29.15■■■□□ 2.26
RAB6A-204ENST00000536566 TMOD3Q9NYL9 352 aa29.15■■■□□ 2.26
RAB6A-204ENST00000536566 ADAMTS7Q9UKP4 1686 aa29.15■■■□□ 2.26
RAB6A-204ENST00000536566 MAP3K5Q99683 1374 aa29.14■■■□□ 2.26
RAB6A-204ENST00000536566 GNAT3A8MTJ3 354 aa29.14■■■□□ 2.26
RAB6A-204ENST00000536566 RREB1Q92766 1687 aa29.14■■■□□ 2.26
RAB6A-204ENST00000536566 KAT6BQ8WYB5 2073 aa29.13■■■□□ 2.25
RAB6A-204ENST00000536566 PIGBQ92521 554 aa29.13■■■□□ 2.25
RAB6A-204ENST00000536566 ITGB4P16144 1822 aa29.12■■■□□ 2.25
RAB6A-204ENST00000536566 RNMTO43148 476 aaKnown RBP29.11■■■□□ 2.25
RAB6A-204ENST00000536566 HTATSF1O43719 755 aaKnown RBP29.11■■■□□ 2.25
RAB6A-204ENST00000536566 TXNRD1Q16881 649 aa29.11■■■□□ 2.25
RAB6A-204ENST00000536566 PROM2Q8N271 834 aa29.11■■■□□ 2.25
RAB6A-204ENST00000536566 SMARCC1Q92922 1105 aaPredicted RBP29.11■■■□□ 2.25
RAB6A-204ENST00000536566 MRC1P22897 1456 aa29.1■■■□□ 2.25
RAB6A-204ENST00000536566 CABP4P57796 275 aa29.1■■■□□ 2.25
RAB6A-204ENST00000536566 MAPK8IP3Q9UPT6 1336 aa29.1■■■□□ 2.25
RAB6A-204ENST00000536566 SCN11AQ9UI33 1791 aa29.1■■■□□ 2.25
RAB6A-204ENST00000536566 SLC27A3Q5K4L6 730 aa29.09■■■□□ 2.25
RAB6A-204ENST00000536566 ADAMTS8Q9UP79 889 aa29.09■■■□□ 2.25
RAB6A-204ENST00000536566 HMGB2P26583 209 aaKnown RBP29.08■■■□□ 2.25
RAB6A-204ENST00000536566 LGR6Q9HBX8 967 aa29.08■■■□□ 2.25
RAB6A-204ENST00000536566 CCDC184Q52MB2 194 aa29.07■■■□□ 2.24
RAB6A-204ENST00000536566 CEMIPQ8WUJ3 1361 aa29.07■■■□□ 2.24
RAB6A-204ENST00000536566 SLC52A2Q9HAB3 445 aa29.07■■■□□ 2.24
RAB6A-204ENST00000536566 PALLDQ8WX93 1383 aa29.06■■■□□ 2.24
RAB6A-204ENST00000536566 MRS2Q9HD23 443 aa29.06■■■□□ 2.24
RAB6A-204ENST00000536566 LY75O60449 1722 aa29.06■■■□□ 2.24
RAB6A-204ENST00000536566 NFE2L2Q16236 605 aa29.05■■■□□ 2.24
RAB6A-204ENST00000536566 NFATC2IPQ8NCF5 419 aa29.05■■■□□ 2.24
RAB6A-204ENST00000536566 IL17REQ8NFR9 667 aa29.05■■■□□ 2.24
RAB6A-204ENST00000536566 RUNDC1Q96C34 613 aa29.05■■■□□ 2.24
RAB6A-204ENST00000536566 NUP188Q5SRE5 1749 aa29.05■■■□□ 2.24
RAB6A-204ENST00000536566 PNISRQ8TF01 805 aaKnown RBP29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms