RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 DCTN1Q14203 1278 aa27.12■■□□□ 1.93
PDXDC1-205ENST00000535621 GNAI1P63096 354 aa27.12■■□□□ 1.93
PDXDC1-205ENST00000535621 FAM208AQ9UK61 1670 aaKnown RBP27.11■■□□□ 1.93
PDXDC1-205ENST00000535621 CRBNQ96SW2 442 aa27.11■■□□□ 1.93
PDXDC1-205ENST00000535621 LAS1LQ9Y4W2 734 aaKnown RBP27.11■■□□□ 1.93
PDXDC1-205ENST00000535621 NCAPD2Q15021 1401 aa27.1■■□□□ 1.93
PDXDC1-205ENST00000535621 CFAP44Q96MT7 982 aa27.1■■□□□ 1.93
PDXDC1-205ENST00000535621 NLRP2Q9NX02 1062 aa27.1■■□□□ 1.93
PDXDC1-205ENST00000535621 CSB-PGBD3P0DP91 1061 aa27.09■■□□□ 1.93
PDXDC1-205ENST00000535621 PELP1Q8IZL8 1130 aaKnown RBP27.09■■□□□ 1.93
PDXDC1-205ENST00000535621 GAS2L2Q8NHY3 880 aa27.09■■□□□ 1.93
PDXDC1-205ENST00000535621 COL5A2P05997 1499 aaPredicted RBP27.08■■□□□ 1.93
PDXDC1-205ENST00000535621 MBIPQ9NS73 344 aa27.07■■□□□ 1.92
PDXDC1-205ENST00000535621 MCM10Q7L590 875 aa27.07■■□□□ 1.92
PDXDC1-205ENST00000535621 CCDC136Q96JN2 1154 aa27.07■■□□□ 1.92
PDXDC1-205ENST00000535621 NUTM2BA6NNL0 878 aaPredicted RBP27.06■■□□□ 1.92
PDXDC1-205ENST00000535621 NUTM2EB1AL46 878 aaPredicted RBP27.06■■□□□ 1.92
PDXDC1-205ENST00000535621 NUTM2AQ8IVF1 878 aaPredicted RBP27.06■■□□□ 1.92
PDXDC1-205ENST00000535621 ADAMTS2O95450 1211 aa27.05■■□□□ 1.92
PDXDC1-205ENST00000535621 BCL2L13Q9BXK5 485 aa27.05■■□□□ 1.92
PDXDC1-205ENST00000535621 STRN4Q9NRL3 753 aa27.04■■□□□ 1.92
PDXDC1-205ENST00000535621 COL14A1Q05707 1796 aaKnown RBP27.03■■□□□ 1.92
PDXDC1-205ENST00000535621 PDE3AQ14432 1141 aa27.03■■□□□ 1.92
PDXDC1-205ENST00000535621 CRB1P82279 1406 aa27.02■■□□□ 1.92
PDXDC1-205ENST00000535621 HTATSF1O43719 755 aaKnown RBP27.02■■□□□ 1.92
PDXDC1-205ENST00000535621 RTF1Q92541 710 aaKnown RBP27.02■■□□□ 1.92
PDXDC1-205ENST00000535621 FRAT1Q92837 279 aaPredicted RBP27.01■■□□□ 1.91
PDXDC1-205ENST00000535621 BTG4Q9NY30 223 aa27.01■■□□□ 1.91
PDXDC1-205ENST00000535621 MEGF6O75095 1541 aa27.01■■□□□ 1.91
PDXDC1-205ENST00000535621 WDR17Q8IZU2 1322 aa27.01■■□□□ 1.91
PDXDC1-205ENST00000535621 CANXP27824 592 aaKnown RBP27■■□□□ 1.91
PDXDC1-205ENST00000535621 LARP1Q6PKG0 1096 aaKnown RBP27■■□□□ 1.91
PDXDC1-205ENST00000535621 SSH1Q8WYL5 1049 aa27■■□□□ 1.91
PDXDC1-205ENST00000535621 PLCH1Q4KWH8 1693 aa27■■□□□ 1.91
PDXDC1-205ENST00000535621 CHL1O00533 1208 aa27■■□□□ 1.91
PDXDC1-205ENST00000535621 GNAT3A8MTJ3 354 aa26.99■■□□□ 1.91
PDXDC1-205ENST00000535621 ZNF428Q96B54 188 aa26.99■■□□□ 1.91
PDXDC1-205ENST00000535621 TOM1L2Q6ZVM7 507 aa26.99■■□□□ 1.91
PDXDC1-205ENST00000535621 SMC4Q9NTJ3 1288 aa26.99■■□□□ 1.91
PDXDC1-205ENST00000535621 HSPA1LP34931 641 aa26.98■■□□□ 1.91
PDXDC1-205ENST00000535621 MAP3K5Q99683 1374 aa26.98■■□□□ 1.91
PDXDC1-205ENST00000535621 VIRMAQ69YN4 1812 aaKnown RBP26.97■■□□□ 1.91
PDXDC1-205ENST00000535621 TSPYL6Q8N831 410 aa26.97■■□□□ 1.91
PDXDC1-205ENST00000535621 VAMP4O75379 141 aa26.97■■□□□ 1.91
PDXDC1-205ENST00000535621 ALDH1L2Q3SY69 923 aa26.97■■□□□ 1.91
PDXDC1-205ENST00000535621 LRRC37A3O60309 1634 aa26.96■■□□□ 1.91
PDXDC1-205ENST00000535621 EVA1CP58658 441 aa26.96■■□□□ 1.91
PDXDC1-205ENST00000535621 C8orf58Q8NAV2 365 aa26.95■■□□□ 1.9
PDXDC1-205ENST00000535621 JCADQ9P266 1359 aa26.94■■□□□ 1.9
PDXDC1-205ENST00000535621 PANK1Q8TE04 598 aa26.94■■□□□ 1.9
PDXDC1-205ENST00000535621 USP35Q9P2H5 1018 aa26.94■■□□□ 1.9
PDXDC1-205ENST00000535621 TWISTNBQ3B726 338 aaPredicted RBP26.93■■□□□ 1.9
PDXDC1-205ENST00000535621 ZNF530Q6P9A1 599 aaPredicted RBP26.93■■□□□ 1.9
PDXDC1-205ENST00000535621 RAPGEF4Q8WZA2 1011 aa26.93■■□□□ 1.9
PDXDC1-205ENST00000535621 ZKSCAN2Q63HK3 967 aa26.92■■□□□ 1.9
PDXDC1-205ENST00000535621 IL17REQ8NFR9 667 aa26.92■■□□□ 1.9
PDXDC1-205ENST00000535621 NRAPQ86VF7 1730 aa26.92■■□□□ 1.9
PDXDC1-205ENST00000535621 PLEKHO1Q53GL0 409 aaPredicted RBP26.92■■□□□ 1.9
PDXDC1-205ENST00000535621 ELL2O00472 640 aaPredicted RBP26.91■■□□□ 1.9
PDXDC1-205ENST00000535621 BRPF1P55201 1214 aaPredicted RBP26.91■■□□□ 1.9
PDXDC1-205ENST00000535621 AMOTQ4VCS5 1084 aa26.91■■□□□ 1.9
PDXDC1-205ENST00000535621 TNNQ9UQP3 1299 aa26.91■■□□□ 1.9
PDXDC1-205ENST00000535621 RLBP1P12271 317 aa26.9■■□□□ 1.9
PDXDC1-205ENST00000535621 LRP6O75581 1613 aa26.89■■□□□ 1.9
PDXDC1-205ENST00000535621 PKD1L3Q7Z443 1732 aa26.89■■□□□ 1.9
PDXDC1-205ENST00000535621 TATP17735 454 aaPredicted RBP26.89■■□□□ 1.9
PDXDC1-205ENST00000535621 CARD10Q9BWT7 1032 aa26.89■■□□□ 1.9
PDXDC1-205ENST00000535621 COG6Q9Y2V7 657 aa26.89■■□□□ 1.9
PDXDC1-205ENST00000535621 KIF16BQ96L93 1317 aa26.89■■□□□ 1.89
PDXDC1-205ENST00000535621 MIS18AQ9NYP9 233 aa26.89■■□□□ 1.89
PDXDC1-205ENST00000535621 PARP4Q9UKK3 1724 aaKnown RBP26.88■■□□□ 1.89
PDXDC1-205ENST00000535621 LGR6Q9HBX8 967 aa26.88■■□□□ 1.89
PDXDC1-205ENST00000535621 NOB1Q9ULX3 412 aaKnown RBP26.88■■□□□ 1.89
PDXDC1-205ENST00000535621 CEMIPQ8WUJ3 1361 aa26.87■■□□□ 1.89
PDXDC1-205ENST00000535621 TRIM27P14373 513 aa26.87■■□□□ 1.89
PDXDC1-205ENST00000535621 TSPYL4Q9UJ04 414 aa26.87■■□□□ 1.89
PDXDC1-205ENST00000535621 MPRIPQ6WCQ1 1025 aa26.87■■□□□ 1.89
PDXDC1-205ENST00000535621 CLUAP1Q96AJ1 413 aa26.87■■□□□ 1.89
PDXDC1-205ENST00000535621 KRT24Q2M2I5 525 aa26.86■■□□□ 1.89
PDXDC1-205ENST00000535621 AKAP4Q5JQC9 854 aa26.86■■□□□ 1.89
PDXDC1-205ENST00000535621 ATF7IPQ6VMQ6 1270 aa26.86■■□□□ 1.89
PDXDC1-205ENST00000535621 OVOS2A0A0G2JMS6 1433 aa26.85■■□□□ 1.89
PDXDC1-205ENST00000535621 SHANK3Q9BYB0 1731 aa26.85■■□□□ 1.89
PDXDC1-205ENST00000535621 MS4A1P11836 297 aa26.85■■□□□ 1.89
PDXDC1-205ENST00000535621 DZIP1LQ8IYY4 767 aaKnown RBP26.85■■□□□ 1.89
PDXDC1-205ENST00000535621 MRPL50Q8N5N7 158 aaKnown RBP26.85■■□□□ 1.89
PDXDC1-205ENST00000535621 IPO8O15397 1037 aaKnown RBP26.83■■□□□ 1.89
PDXDC1-205ENST00000535621 NWD2Q9ULI1 1742 aa26.83■■□□□ 1.89
PDXDC1-205ENST00000535621 C1orf141Q5JVX7 400 aa26.83■■□□□ 1.89
PDXDC1-205ENST00000535621 FTSJ3Q8IY81 847 aaKnown RBP26.83■■□□□ 1.89
PDXDC1-205ENST00000535621 C8orf37Q96NL8 207 aa26.83■■□□□ 1.89
PDXDC1-205ENST00000535621 BABAM1Q9NWV8 329 aa26.83■■□□□ 1.89
PDXDC1-205ENST00000535621 TAF7Q15545 349 aaPredicted RBP26.82■■□□□ 1.88
PDXDC1-205ENST00000535621 SLIT2O94813 1529 aa26.82■■□□□ 1.88
PDXDC1-205ENST00000535621 CYP27B1O15528 508 aa26.81■■□□□ 1.88
PDXDC1-205ENST00000535621 IL2RBP14784 551 aa26.8■■□□□ 1.88
PDXDC1-205ENST00000535621 SCN11AQ9UI33 1791 aa26.8■■□□□ 1.88
PDXDC1-205ENST00000535621 PLEKHG2Q9H7P9 1386 aa26.8■■□□□ 1.88
PDXDC1-205ENST00000535621 WNK3Q9BYP7 1800 aa26.8■■□□□ 1.88
PDXDC1-205ENST00000535621 MVPQ14764 893 aaKnown RBP26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 298.5 ms