RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 MYH16Q9H6N6 1097 aa29.9■■■□□ 2.38
RBFOX1-206ENST00000535565 SPINK5Q9NQ38 1064 aaPredicted RBP29.9■■■□□ 2.38
RBFOX1-206ENST00000535565 CRB1P82279 1406 aa29.89■■■□□ 2.38
RBFOX1-206ENST00000535565 TATP17735 454 aaPredicted RBP29.89■■■□□ 2.38
RBFOX1-206ENST00000535565 RTF1Q92541 710 aaKnown RBP29.89■■■□□ 2.38
RBFOX1-206ENST00000535565 CARD10Q9BWT7 1032 aa29.89■■■□□ 2.38
RBFOX1-206ENST00000535565 NRAPQ86VF7 1730 aa29.88■■■□□ 2.37
RBFOX1-206ENST00000535565 MAP3K5Q99683 1374 aa29.88■■■□□ 2.37
RBFOX1-206ENST00000535565 HTATSF1O43719 755 aaKnown RBP29.87■■■□□ 2.37
RBFOX1-206ENST00000535565 LARP1Q6PKG0 1096 aaKnown RBP29.87■■■□□ 2.37
RBFOX1-206ENST00000535565 GNAT3A8MTJ3 354 aa29.86■■■□□ 2.37
RBFOX1-206ENST00000535565 MEGF6O75095 1541 aa29.85■■■□□ 2.37
RBFOX1-206ENST00000535565 PKD1L3Q7Z443 1732 aa29.85■■■□□ 2.37
RBFOX1-206ENST00000535565 ZNF530Q6P9A1 599 aaPredicted RBP29.83■■■□□ 2.37
RBFOX1-206ENST00000535565 THUMPD2Q9BTF0 503 aaKnown RBP29.83■■■□□ 2.37
RBFOX1-206ENST00000535565 DCTN1Q14203 1278 aa29.82■■■□□ 2.36
RBFOX1-206ENST00000535565 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.82■■■□□ 2.36
RBFOX1-206ENST00000535565 VIRMAQ69YN4 1812 aaKnown RBP29.82■■■□□ 2.36
RBFOX1-206ENST00000535565 MCM10Q7L590 875 aa29.81■■■□□ 2.36
RBFOX1-206ENST00000535565 SPG7Q9UQ90 795 aa29.81■■■□□ 2.36
RBFOX1-206ENST00000535565 LRRC37A3O60309 1634 aa29.81■■■□□ 2.36
RBFOX1-206ENST00000535565 SLIT2O94813 1529 aa29.81■■■□□ 2.36
RBFOX1-206ENST00000535565 GNAI1P63096 354 aa29.81■■■□□ 2.36
RBFOX1-206ENST00000535565 AKAP4Q5JQC9 854 aa29.81■■■□□ 2.36
RBFOX1-206ENST00000535565 C1orf141Q5JVX7 400 aa29.81■■■□□ 2.36
RBFOX1-206ENST00000535565 IFT57Q9NWB7 429 aa29.81■■■□□ 2.36
RBFOX1-206ENST00000535565 OVOS2A0A0G2JMS6 1433 aa29.8■■■□□ 2.36
RBFOX1-206ENST00000535565 FANCIQ9NVI1 1328 aa29.79■■■□□ 2.36
RBFOX1-206ENST00000535565 LRP6O75581 1613 aa29.78■■■□□ 2.36
RBFOX1-206ENST00000535565 LAS1LQ9Y4W2 734 aaKnown RBP29.78■■■□□ 2.36
RBFOX1-206ENST00000535565 IL2RBP14784 551 aa29.77■■■□□ 2.36
RBFOX1-206ENST00000535565 RCAN3Q9UKA8 241 aa29.77■■■□□ 2.36
RBFOX1-206ENST00000535565 SUPT16HQ9Y5B9 1047 aaKnown RBP29.77■■■□□ 2.36
RBFOX1-206ENST00000535565 WNK3Q9BYP7 1800 aa29.77■■■□□ 2.36
RBFOX1-206ENST00000535565 CFAP44Q96MT7 982 aa29.77■■■□□ 2.36
RBFOX1-206ENST00000535565 C8orf37Q96NL8 207 aa29.76■■■□□ 2.35
RBFOX1-206ENST00000535565 TSR2Q969E8 191 aaKnown RBP29.75■■■□□ 2.35
RBFOX1-206ENST00000535565 NGLY1Q96IV0 654 aa29.75■■■□□ 2.35
RBFOX1-206ENST00000535565 USP35Q9P2H5 1018 aa29.75■■■□□ 2.35
RBFOX1-206ENST00000535565 ZNF853P0CG23 659 aa29.74■■■□□ 2.35
RBFOX1-206ENST00000535565 MEX3CQ5U5Q3 659 aaKnown RBP29.72■■■□□ 2.35
RBFOX1-206ENST00000535565 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.71■■■□□ 2.35
RBFOX1-206ENST00000535565 CEMIPQ8WUJ3 1361 aa29.71■■■□□ 2.35
RBFOX1-206ENST00000535565 IL17REQ8NFR9 667 aa29.71■■■□□ 2.35
RBFOX1-206ENST00000535565 ADAMTS7Q9UKP4 1686 aa29.71■■■□□ 2.35
RBFOX1-206ENST00000535565 SCN11AQ9UI33 1791 aa29.7■■■□□ 2.35
RBFOX1-206ENST00000535565 UNC5CLQ8IV45 518 aa29.7■■■□□ 2.35
RBFOX1-206ENST00000535565 IFNL2Q8IZJ0 200 aa29.7■■■□□ 2.35
RBFOX1-206ENST00000535565 PCDH11XQ9BZA7 1347 aa29.69■■■□□ 2.34
RBFOX1-206ENST00000535565 PCDH11YQ9BZA8 1340 aa29.69■■■□□ 2.34
RBFOX1-206ENST00000535565 ZCRB1Q8TBF4 217 aaKnown RBP29.69■■■□□ 2.34
RBFOX1-206ENST00000535565 MBIPQ9NS73 344 aa29.69■■■□□ 2.34
RBFOX1-206ENST00000535565 SHANK3Q9BYB0 1731 aa29.69■■■□□ 2.34
RBFOX1-206ENST00000535565 NEFLP07196 543 aa29.69■■■□□ 2.34
RBFOX1-206ENST00000535565 CT47B1P0C2W7 299 aaPredicted RBP29.69■■■□□ 2.34
RBFOX1-206ENST00000535565 PHKG2P15735 406 aa29.69■■■□□ 2.34
RBFOX1-206ENST00000535565 THRAP3Q9Y2W1 955 aaKnown RBP29.69■■■□□ 2.34
RBFOX1-206ENST00000535565 CHL1O00533 1208 aa29.68■■■□□ 2.34
RBFOX1-206ENST00000535565 SPATA31A1Q5TZJ5 1347 aa29.67■■■□□ 2.34
RBFOX1-206ENST00000535565 EXOSC9Q06265 439 aaKnown RBP29.67■■■□□ 2.34
RBFOX1-206ENST00000535565 MPRIPQ6WCQ1 1025 aa29.67■■■□□ 2.34
RBFOX1-206ENST00000535565 FNBP4Q8N3X1 1017 aaPredicted RBP29.67■■■□□ 2.34
RBFOX1-206ENST00000535565 DISP2A7MBM2 1401 aa29.67■■■□□ 2.34
RBFOX1-206ENST00000535565 RNMTO43148 476 aaKnown RBP29.66■■■□□ 2.34
RBFOX1-206ENST00000535565 HSP90AB1P08238 724 aaKnown RBP29.66■■■□□ 2.34
RBFOX1-206ENST00000535565 BCL9LQ86UU0 1499 aa29.66■■■□□ 2.34
RBFOX1-206ENST00000535565 CCDC9Q9Y3X0 531 aaKnown RBP29.65■■■□□ 2.34
RBFOX1-206ENST00000535565 SPATA31A5Q5VU36 1347 aa29.65■■■□□ 2.34
RBFOX1-206ENST00000535565 SPATA31A7Q8IWB4 1347 aa29.65■■■□□ 2.34
RBFOX1-206ENST00000535565 TEFQ10587 303 aa29.64■■■□□ 2.34
RBFOX1-206ENST00000535565 CDCA7Q9BWT1 371 aaPredicted RBP29.64■■■□□ 2.34
RBFOX1-206ENST00000535565 LGR6Q9HBX8 967 aa29.64■■■□□ 2.34
RBFOX1-206ENST00000535565 BABAM1Q9NWV8 329 aa29.64■■■□□ 2.34
RBFOX1-206ENST00000535565 SIPA1L3O60292 1781 aaPredicted RBP29.64■■■□□ 2.34
RBFOX1-206ENST00000535565 CYP27B1O15528 508 aa29.64■■■□□ 2.33
RBFOX1-206ENST00000535565 TAF7Q15545 349 aaPredicted RBP29.64■■■□□ 2.33
RBFOX1-206ENST00000535565 TSPYL4Q9UJ04 414 aa29.64■■■□□ 2.33
RBFOX1-206ENST00000535565 GTF3C3Q9Y5Q9 886 aa29.63■■■□□ 2.33
RBFOX1-206ENST00000535565 RNF123Q5XPI4 1314 aa29.62■■■□□ 2.33
RBFOX1-206ENST00000535565 VPS72Q15906 364 aa29.61■■■□□ 2.33
RBFOX1-206ENST00000535565 DCAF5Q96JK2 942 aa29.61■■■□□ 2.33
RBFOX1-206ENST00000535565 USP21Q9UK80 565 aa29.61■■■□□ 2.33
RBFOX1-206ENST00000535565 KDM6AO15550 1401 aaPredicted RBP29.6■■■□□ 2.33
RBFOX1-206ENST00000535565 KDM3BQ7LBC6 1761 aa29.6■■■□□ 2.33
RBFOX1-206ENST00000535565 RRP1P56182 461 aaKnown RBP29.58■■■□□ 2.33
RBFOX1-206ENST00000535565 BARGINQ6ZT62 677 aa29.57■■■□□ 2.32
RBFOX1-206ENST00000535565 MIS18AQ9NYP9 233 aa29.57■■■□□ 2.32
RBFOX1-206ENST00000535565 DDX54Q8TDD1 881 aaKnown RBP29.56■■■□□ 2.32
RBFOX1-206ENST00000535565 ZNF428Q96B54 188 aa29.56■■■□□ 2.32
RBFOX1-206ENST00000535565 TNS2Q63HR2 1409 aa29.56■■■□□ 2.32
RBFOX1-206ENST00000535565 MRC1P22897 1456 aa29.56■■■□□ 2.32
RBFOX1-206ENST00000535565 EXOC5O00471 708 aa29.56■■■□□ 2.32
RBFOX1-206ENST00000535565 RARSP54136 660 aaKnown RBP29.55■■■□□ 2.32
RBFOX1-206ENST00000535565 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.55■■■□□ 2.32
RBFOX1-206ENST00000535565 AFF2P51816 1311 aa29.55■■■□□ 2.32
RBFOX1-206ENST00000535565 NKX1-1Q15270 411 aaPredicted RBP29.54■■■□□ 2.32
RBFOX1-206ENST00000535565 TWISTNBQ3B726 338 aaPredicted RBP29.54■■■□□ 2.32
RBFOX1-206ENST00000535565 BTBD11A6QL63 1104 aa29.53■■■□□ 2.32
RBFOX1-206ENST00000535565 SLC52A2Q9HAB3 445 aa29.53■■■□□ 2.32
RBFOX1-206ENST00000535565 C8orf58Q8NAV2 365 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms