RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 ZCRB1Q8TBF4 217 aaKnown RBP18.86■□□□□ 0.61
TMEM258-203ENST00000535297 PKD1L3Q7Z443 1732 aa18.86■□□□□ 0.61
TMEM258-203ENST00000535297 PER1O15534 1290 aaPredicted RBP18.85■□□□□ 0.61
TMEM258-203ENST00000535297 TATP17735 454 aaPredicted RBP18.85■□□□□ 0.61
TMEM258-203ENST00000535297 NPC1L1Q9UHC9 1359 aa18.84■□□□□ 0.61
TMEM258-203ENST00000535297 DOT1LQ8TEK3 1739 aa18.84■□□□□ 0.61
TMEM258-203ENST00000535297 PTF1AQ7RTS3 328 aa18.84■□□□□ 0.61
TMEM258-203ENST00000535297 BTAF1O14981 1849 aa18.84■□□□□ 0.61
TMEM258-203ENST00000535297 DDX54Q8TDD1 881 aaKnown RBP18.83■□□□□ 0.6
TMEM258-203ENST00000535297 KAT6BQ8WYB5 2073 aa18.82■□□□□ 0.6
TMEM258-203ENST00000535297 KCNQ2O43526 872 aa18.82■□□□□ 0.6
TMEM258-203ENST00000535297 EIF4A2Q14240 407 aaKnown RBP18.82■□□□□ 0.6
TMEM258-203ENST00000535297 ACSBG1Q96GR2 724 aa18.82■□□□□ 0.6
TMEM258-203ENST00000535297 EYA1Q99502 592 aa18.82■□□□□ 0.6
TMEM258-203ENST00000535297 PLEKHG2Q9H7P9 1386 aa18.81■□□□□ 0.6
TMEM258-203ENST00000535297 PCDH11XQ9BZA7 1347 aa18.81■□□□□ 0.6
TMEM258-203ENST00000535297 PCDH11YQ9BZA8 1340 aa18.81■□□□□ 0.6
TMEM258-203ENST00000535297 IGSF1Q8N6C5 1336 aa18.79■□□□□ 0.6
TMEM258-203ENST00000535297 PSDA5PKW4 1024 aaPredicted RBP18.79■□□□□ 0.6
TMEM258-203ENST00000535297 NBPF14Q5TI25 921 aa18.78■□□□□ 0.6
TMEM258-203ENST00000535297 LRP5O75197 1615 aa18.78■□□□□ 0.6
TMEM258-203ENST00000535297 R3HDM1Q15032 1099 aaKnown RBP18.77■□□□□ 0.6
TMEM258-203ENST00000535297 CC2D1BQ5T0F9 858 aaKnown RBP18.77■□□□□ 0.6
TMEM258-203ENST00000535297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.76■□□□□ 0.59
TMEM258-203ENST00000535297 TXNRD1Q16881 649 aa18.75■□□□□ 0.59
TMEM258-203ENST00000535297 PROM2Q8N271 834 aa18.75■□□□□ 0.59
TMEM258-203ENST00000535297 SPG7Q9UQ90 795 aa18.75■□□□□ 0.59
TMEM258-203ENST00000535297 CYP27B1O15528 508 aa18.74■□□□□ 0.59
TMEM258-203ENST00000535297 TOGARAM1Q9Y4F4 1720 aa18.74■□□□□ 0.59
TMEM258-203ENST00000535297 PRIM1P49642 420 aaKnown RBP18.73■□□□□ 0.59
TMEM258-203ENST00000535297 SYTL4Q96C24 671 aaPredicted RBP18.73■□□□□ 0.59
TMEM258-203ENST00000535297 PAPPAQ13219 1627 aa18.73■□□□□ 0.59
TMEM258-203ENST00000535297 LY75O60449 1722 aa18.72■□□□□ 0.59
TMEM258-203ENST00000535297 MTHFSP49914 203 aa18.72■□□□□ 0.59
TMEM258-203ENST00000535297 IL13P35225 146 aa18.71■□□□□ 0.59
TMEM258-203ENST00000535297 ANO8Q9HCE9 1232 aaPredicted RBP18.71■□□□□ 0.59
TMEM258-203ENST00000535297 KDRP35968 1356 aa18.7■□□□□ 0.58
TMEM258-203ENST00000535297 ITGB4P16144 1822 aa18.7■□□□□ 0.58
TMEM258-203ENST00000535297 NKX1-1Q15270 411 aaPredicted RBP18.69■□□□□ 0.58
TMEM258-203ENST00000535297 CASZ1Q86V15 1759 aa18.68■□□□□ 0.58
TMEM258-203ENST00000535297 SLC27A3Q5K4L6 730 aa18.68■□□□□ 0.58
TMEM258-203ENST00000535297 IFNL2Q8IZJ0 200 aa18.68■□□□□ 0.58
TMEM258-203ENST00000535297 COL3A1P02461 1466 aaPredicted RBP18.68■□□□□ 0.58
TMEM258-203ENST00000535297 PHKG2P15735 406 aa18.67■□□□□ 0.58
TMEM258-203ENST00000535297 AEBP1Q8IUX7 1158 aa18.67■□□□□ 0.58
TMEM258-203ENST00000535297 STK32BQ9NY57 414 aa18.67■□□□□ 0.58
TMEM258-203ENST00000535297 CNGB1Q14028 1251 aaPredicted RBP18.66■□□□□ 0.58
TMEM258-203ENST00000535297 AMOTQ4VCS5 1084 aa18.66■□□□□ 0.58
TMEM258-203ENST00000535297 PLEKHO1Q53GL0 409 aaPredicted RBP18.66■□□□□ 0.58
TMEM258-203ENST00000535297 SULT6B1Q6IMI4 303 aa18.66■□□□□ 0.58
TMEM258-203ENST00000535297 SRCAPQ6ZRS2 3230 aa18.65■□□□□ 0.58
TMEM258-203ENST00000535297 DIAPH1O60610 1272 aaKnown RBP18.65■□□□□ 0.58
TMEM258-203ENST00000535297 SLC15A2Q16348 729 aa18.65■□□□□ 0.58
TMEM258-203ENST00000535297 LRRC4BQ9NT99 713 aa18.64■□□□□ 0.57
TMEM258-203ENST00000535297 QSER1Q2KHR3 1735 aa18.63■□□□□ 0.57
TMEM258-203ENST00000535297 HSP90AB1P08238 724 aaKnown RBP18.63■□□□□ 0.57
TMEM258-203ENST00000535297 MPRIPQ6WCQ1 1025 aa18.63■□□□□ 0.57
TMEM258-203ENST00000535297 ZNF530Q6P9A1 599 aaPredicted RBP18.62■□□□□ 0.57
TMEM258-203ENST00000535297 PALLDQ8WX93 1383 aa18.62■□□□□ 0.57
TMEM258-203ENST00000535297 CCNL1Q9UK58 526 aaPredicted RBP18.61■□□□□ 0.57
TMEM258-203ENST00000535297 C5P01031 1676 aa18.6■□□□□ 0.57
TMEM258-203ENST00000535297 PIGBQ92521 554 aa18.6■□□□□ 0.57
TMEM258-203ENST00000535297 SMARCC1Q92922 1105 aaPredicted RBP18.6■□□□□ 0.57
TMEM258-203ENST00000535297 DCAF5Q96JK2 942 aa18.6■□□□□ 0.57
TMEM258-203ENST00000535297 CFAP53Q96M91 514 aa18.6■□□□□ 0.57
TMEM258-203ENST00000535297 TMOD3Q9NYL9 352 aa18.6■□□□□ 0.57
TMEM258-203ENST00000535297 KDM6AO15550 1401 aaPredicted RBP18.59■□□□□ 0.57
TMEM258-203ENST00000535297 TAF1LQ8IZX4 1826 aa18.59■□□□□ 0.57
TMEM258-203ENST00000535297 TUBGCP6Q96RT7 1819 aa18.59■□□□□ 0.57
TMEM258-203ENST00000535297 HMGB2P26583 209 aaKnown RBP18.59■□□□□ 0.57
TMEM258-203ENST00000535297 PPP2R1AP30153 589 aa18.59■□□□□ 0.57
TMEM258-203ENST00000535297 ZEB1P37275 1124 aaPredicted RBP18.59■□□□□ 0.57
TMEM258-203ENST00000535297 ZNF827Q17R98 1081 aa18.59■□□□□ 0.57
TMEM258-203ENST00000535297 C1orf141Q5JVX7 400 aa18.59■□□□□ 0.57
TMEM258-203ENST00000535297 AKT1S1Q96B36 256 aa18.59■□□□□ 0.57
TMEM258-203ENST00000535297 ERVV-2B6SEH9 535 aa18.58■□□□□ 0.56
TMEM258-203ENST00000535297 HMOX1P09601 288 aa18.58■□□□□ 0.56
TMEM258-203ENST00000535297 SPON1Q9HCB6 807 aa18.58■□□□□ 0.56
TMEM258-203ENST00000535297 SCN11AQ9UI33 1791 aa18.58■□□□□ 0.56
TMEM258-203ENST00000535297 KCNQ4P56696 695 aa18.56■□□□□ 0.56
TMEM258-203ENST00000535297 U2SURPO15042 1029 aaKnown RBP18.55■□□□□ 0.56
TMEM258-203ENST00000535297 AKAP4Q5JQC9 854 aa18.55■□□□□ 0.56
TMEM258-203ENST00000535297 PDGFDQ9GZP0 370 aaPredicted RBP18.55■□□□□ 0.56
TMEM258-203ENST00000535297 VIRMAQ69YN4 1812 aaKnown RBP18.54■□□□□ 0.56
TMEM258-203ENST00000535297 C4BP0C0L5 1744 aa18.54■□□□□ 0.56
TMEM258-203ENST00000535297 ZNF831Q5JPB2 1677 aa18.54■□□□□ 0.56
TMEM258-203ENST00000535297 ADAMTS7Q9UKP4 1686 aa18.54■□□□□ 0.56
TMEM258-203ENST00000535297 NUDCQ9Y266 331 aa18.53■□□□□ 0.56
TMEM258-203ENST00000535297 MRC1P22897 1456 aa18.52■□□□□ 0.56
TMEM258-203ENST00000535297 PNPLA7Q6ZV29 1317 aa18.52■□□□□ 0.56
TMEM258-203ENST00000535297 ZBTB7AO95365 584 aa18.52■□□□□ 0.56
TMEM258-203ENST00000535297 CABP4P57796 275 aa18.52■□□□□ 0.56
TMEM258-203ENST00000535297 MTFR1LQ9H019 292 aa18.52■□□□□ 0.56
TMEM258-203ENST00000535297 TFCP2L1Q9NZI6 479 aa18.52■□□□□ 0.56
TMEM258-203ENST00000535297 ASAP1Q9ULH1 1129 aa18.52■□□□□ 0.56
TMEM258-203ENST00000535297 LOC102724428A0A0B4J2F2 783 aa18.51■□□□□ 0.55
TMEM258-203ENST00000535297 SIK1P57059 783 aa18.51■□□□□ 0.55
TMEM258-203ENST00000535297 ATG3Q9NT62 314 aa18.51■□□□□ 0.55
TMEM258-203ENST00000535297 DDX10Q13206 875 aaKnown RBP18.5■□□□□ 0.55
TMEM258-203ENST00000535297 MTHFSDQ2M296 383 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms