RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 MCM10Q7L590 875 aa30.66■■■□□ 2.5
PTPMT1-205ENST00000534775 ROBO1Q9Y6N7 1651 aa30.66■■■□□ 2.5
PTPMT1-205ENST00000534775 GNAT3A8MTJ3 354 aa30.65■■■□□ 2.5
PTPMT1-205ENST00000534775 C20orf194Q5TEA3 1177 aa30.65■■■□□ 2.5
PTPMT1-205ENST00000534775 CCDC136Q96JN2 1154 aa30.65■■■□□ 2.5
PTPMT1-205ENST00000534775 MAP3K5Q99683 1374 aa30.65■■■□□ 2.5
PTPMT1-205ENST00000534775 PDE3AQ14432 1141 aa30.65■■■□□ 2.5
PTPMT1-205ENST00000534775 LRRC37A3O60309 1634 aa30.65■■■□□ 2.5
PTPMT1-205ENST00000534775 KIAA0232Q92628 1395 aa30.64■■■□□ 2.5
PTPMT1-205ENST00000534775 CRB1P82279 1406 aa30.64■■■□□ 2.49
PTPMT1-205ENST00000534775 AHDC1Q5TGY3 1603 aaPredicted RBP30.62■■■□□ 2.49
PTPMT1-205ENST00000534775 ALDH1L2Q3SY69 923 aa30.62■■■□□ 2.49
PTPMT1-205ENST00000534775 CHL1O00533 1208 aa30.61■■■□□ 2.49
PTPMT1-205ENST00000534775 HAP1P54257 671 aaPredicted RBP30.61■■■□□ 2.49
PTPMT1-205ENST00000534775 AMOTQ4VCS5 1084 aa30.61■■■□□ 2.49
PTPMT1-205ENST00000534775 PLEKHO1Q53GL0 409 aaPredicted RBP30.61■■■□□ 2.49
PTPMT1-205ENST00000534775 SMC4Q9NTJ3 1288 aa30.61■■■□□ 2.49
PTPMT1-205ENST00000534775 FRAT1Q92837 279 aaPredicted RBP30.6■■■□□ 2.49
PTPMT1-205ENST00000534775 BCL2L13Q9BXK5 485 aa30.58■■■□□ 2.49
PTPMT1-205ENST00000534775 CHRNA2Q15822 529 aa30.58■■■□□ 2.49
PTPMT1-205ENST00000534775 SSH1Q8WYL5 1049 aa30.57■■■□□ 2.48
PTPMT1-205ENST00000534775 CSB-PGBD3P0DP91 1061 aa30.56■■■□□ 2.48
PTPMT1-205ENST00000534775 MS4A1P11836 297 aa30.56■■■□□ 2.48
PTPMT1-205ENST00000534775 PRDM11Q9NQV5 511 aa30.56■■■□□ 2.48
PTPMT1-205ENST00000534775 PLEKHG2Q9H7P9 1386 aa30.56■■■□□ 2.48
PTPMT1-205ENST00000534775 VAMP4O75379 141 aa30.55■■■□□ 2.48
PTPMT1-205ENST00000534775 NLRP2Q9NX02 1062 aa30.55■■■□□ 2.48
PTPMT1-205ENST00000534775 KIF16BQ96L93 1317 aa30.55■■■□□ 2.48
PTPMT1-205ENST00000534775 TWISTNBQ3B726 338 aaPredicted RBP30.55■■■□□ 2.48
PTPMT1-205ENST00000534775 ZKSCAN2Q63HK3 967 aa30.55■■■□□ 2.48
PTPMT1-205ENST00000534775 AKAP4Q5JQC9 854 aa30.53■■■□□ 2.48
PTPMT1-205ENST00000534775 BRPF1P55201 1214 aaPredicted RBP30.52■■■□□ 2.48
PTPMT1-205ENST00000534775 ZNF530Q6P9A1 599 aaPredicted RBP30.52■■■□□ 2.48
PTPMT1-205ENST00000534775 BABAM1Q9NWV8 329 aa30.52■■■□□ 2.48
PTPMT1-205ENST00000534775 RAPGEF4Q8WZA2 1011 aa30.51■■■□□ 2.48
PTPMT1-205ENST00000534775 TSPYL6Q8N831 410 aa30.51■■■□□ 2.47
PTPMT1-205ENST00000534775 TSPYL4Q9UJ04 414 aa30.51■■■□□ 2.47
PTPMT1-205ENST00000534775 IPO8O15397 1037 aaKnown RBP30.5■■■□□ 2.47
PTPMT1-205ENST00000534775 C8orf58Q8NAV2 365 aa30.5■■■□□ 2.47
PTPMT1-205ENST00000534775 IL17REQ8NFR9 667 aa30.5■■■□□ 2.47
PTPMT1-205ENST00000534775 COL22A1Q8NFW1 1626 aaPredicted RBP30.49■■■□□ 2.47
PTPMT1-205ENST00000534775 C1orf141Q5JVX7 400 aa30.49■■■□□ 2.47
PTPMT1-205ENST00000534775 CEMIPQ8WUJ3 1361 aa30.48■■■□□ 2.47
PTPMT1-205ENST00000534775 TOM1O60784 492 aa30.48■■■□□ 2.47
PTPMT1-205ENST00000534775 OVOS2A0A0G2JMS6 1433 aa30.47■■■□□ 2.47
PTPMT1-205ENST00000534775 TATP17735 454 aaPredicted RBP30.47■■■□□ 2.47
PTPMT1-205ENST00000534775 PANK1Q8TE04 598 aa30.47■■■□□ 2.47
PTPMT1-205ENST00000534775 AAMPQ13685 434 aa30.47■■■□□ 2.47
PTPMT1-205ENST00000534775 ELL2O00472 640 aaPredicted RBP30.46■■■□□ 2.47
PTPMT1-205ENST00000534775 TAF7Q15545 349 aaPredicted RBP30.46■■■□□ 2.47
PTPMT1-205ENST00000534775 ATF7IPQ6VMQ6 1270 aa30.45■■■□□ 2.47
PTPMT1-205ENST00000534775 FTSJ3Q8IY81 847 aaKnown RBP30.45■■■□□ 2.47
PTPMT1-205ENST00000534775 DZIP1LQ8IYY4 767 aaKnown RBP30.45■■■□□ 2.47
PTPMT1-205ENST00000534775 NOB1Q9ULX3 412 aaKnown RBP30.45■■■□□ 2.47
PTPMT1-205ENST00000534775 WDR17Q8IZU2 1322 aa30.45■■■□□ 2.46
PTPMT1-205ENST00000534775 PHLPP1O60346 1717 aa30.45■■■□□ 2.46
PTPMT1-205ENST00000534775 COL5A2P05997 1499 aaPredicted RBP30.45■■■□□ 2.46
PTPMT1-205ENST00000534775 VIRMAQ69YN4 1812 aaKnown RBP30.44■■■□□ 2.46
PTPMT1-205ENST00000534775 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.44■■■□□ 2.46
PTPMT1-205ENST00000534775 COG6Q9Y2V7 657 aa30.44■■■□□ 2.46
PTPMT1-205ENST00000534775 MRPL50Q8N5N7 158 aaKnown RBP30.43■■■□□ 2.46
PTPMT1-205ENST00000534775 SPG7Q9UQ90 795 aa30.43■■■□□ 2.46
PTPMT1-205ENST00000534775 ARHGAP45Q92619 1136 aa30.41■■■□□ 2.46
PTPMT1-205ENST00000534775 MIS18AQ9NYP9 233 aa30.41■■■□□ 2.46
PTPMT1-205ENST00000534775 PKD1L3Q7Z443 1732 aa30.41■■■□□ 2.46
PTPMT1-205ENST00000534775 MEGF6O75095 1541 aa30.41■■■□□ 2.46
PTPMT1-205ENST00000534775 SOS1Q07889 1333 aaPredicted RBP30.4■■■□□ 2.46
PTPMT1-205ENST00000534775 TRIM27P14373 513 aa30.4■■■□□ 2.46
PTPMT1-205ENST00000534775 PARP4Q9UKK3 1724 aaKnown RBP30.4■■■□□ 2.46
PTPMT1-205ENST00000534775 ADAMTS7Q9UKP4 1686 aa30.4■■■□□ 2.46
PTPMT1-205ENST00000534775 RLBP1P12271 317 aa30.4■■■□□ 2.46
PTPMT1-205ENST00000534775 CLUAP1Q96AJ1 413 aa30.4■■■□□ 2.46
PTPMT1-205ENST00000534775 COL16A1Q07092 1604 aaPredicted RBP30.39■■■□□ 2.46
PTPMT1-205ENST00000534775 COL14A1Q05707 1796 aaKnown RBP30.39■■■□□ 2.46
PTPMT1-205ENST00000534775 UBAP1LF5GYI3 381 aa30.38■■■□□ 2.45
PTPMT1-205ENST00000534775 TEFQ10587 303 aa30.38■■■□□ 2.45
PTPMT1-205ENST00000534775 MVPQ14764 893 aaKnown RBP30.38■■■□□ 2.45
PTPMT1-205ENST00000534775 CERKQ8TCT0 537 aa30.38■■■□□ 2.45
PTPMT1-205ENST00000534775 TNNQ9UQP3 1299 aa30.38■■■□□ 2.45
PTPMT1-205ENST00000534775 RNMTO43148 476 aaKnown RBP30.37■■■□□ 2.45
PTPMT1-205ENST00000534775 TOM1L2Q6ZVM7 507 aa30.37■■■□□ 2.45
PTPMT1-205ENST00000534775 LGR6Q9HBX8 967 aa30.37■■■□□ 2.45
PTPMT1-205ENST00000534775 KDM3BQ7LBC6 1761 aa30.37■■■□□ 2.45
PTPMT1-205ENST00000534775 PIP4K2BP78356 416 aa30.36■■■□□ 2.45
PTPMT1-205ENST00000534775 KRT24Q2M2I5 525 aa30.36■■■□□ 2.45
PTPMT1-205ENST00000534775 MPRIPQ6WCQ1 1025 aa30.36■■■□□ 2.45
PTPMT1-205ENST00000534775 EVA1CP58658 441 aa30.34■■■□□ 2.45
PTPMT1-205ENST00000534775 CARD10Q9BWT7 1032 aa30.34■■■□□ 2.45
PTPMT1-205ENST00000534775 SIPA1L3O60292 1781 aaPredicted RBP30.33■■■□□ 2.45
PTPMT1-205ENST00000534775 SCN11AQ9UI33 1791 aa30.33■■■□□ 2.45
PTPMT1-205ENST00000534775 IFNL2Q8IZJ0 200 aa30.32■■■□□ 2.44
PTPMT1-205ENST00000534775 API5Q9BZZ5 524 aaKnown RBP30.32■■■□□ 2.44
PTPMT1-205ENST00000534775 DDX19BQ9UMR2 479 aa30.32■■■□□ 2.44
PTPMT1-205ENST00000534775 PHKG2P15735 406 aa30.3■■■□□ 2.44
PTPMT1-205ENST00000534775 TCERG1O14776 1098 aaKnown RBP30.29■■■□□ 2.44
PTPMT1-205ENST00000534775 CENPQQ7L2Z9 268 aaPredicted RBP30.29■■■□□ 2.44
PTPMT1-205ENST00000534775 STRN4Q9NRL3 753 aa30.29■■■□□ 2.44
PTPMT1-205ENST00000534775 HSP90AB1P08238 724 aaKnown RBP30.29■■■□□ 2.44
PTPMT1-205ENST00000534775 ITPRIPQ8IWB1 547 aa30.29■■■□□ 2.44
PTPMT1-205ENST00000534775 BTBD11A6QL63 1104 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms