RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 IGSF1Q8N6C5 1336 aa22.24■■□□□ 1.15
VPS51-216ENST00000534591 PRDM11Q9NQV5 511 aa22.24■■□□□ 1.15
VPS51-216ENST00000534591 COL18A1P39060 1754 aa22.24■■□□□ 1.15
VPS51-216ENST00000534591 LMOD3Q0VAK6 560 aa22.23■■□□□ 1.15
VPS51-216ENST00000534591 ARHGEF25Q86VW2 580 aa22.23■■□□□ 1.15
VPS51-216ENST00000534591 CAMTA1Q9Y6Y1 1673 aa22.23■■□□□ 1.15
VPS51-216ENST00000534591 KDRP35968 1356 aa22.23■■□□□ 1.15
VPS51-216ENST00000534591 RRP1P56182 461 aaKnown RBP22.22■■□□□ 1.15
VPS51-216ENST00000534591 VPS72Q15906 364 aa22.22■■□□□ 1.15
VPS51-216ENST00000534591 AEBP1Q8IUX7 1158 aa22.21■■□□□ 1.15
VPS51-216ENST00000534591 EYA1Q99502 592 aa22.21■■□□□ 1.15
VPS51-216ENST00000534591 IRX6P78412 446 aaPredicted RBP22.21■■□□□ 1.15
VPS51-216ENST00000534591 CALD1Q05682 793 aaKnown RBP22.21■■□□□ 1.15
VPS51-216ENST00000534591 CPDO75976 1380 aa22.2■■□□□ 1.14
VPS51-216ENST00000534591 CCDC9Q9Y3X0 531 aaKnown RBP22.18■■□□□ 1.14
VPS51-216ENST00000534591 THSD7AQ9UPZ6 1657 aa22.18■■□□□ 1.14
VPS51-216ENST00000534591 UPF1Q92900 1129 aaKnown RBP eCLIP22.16■■□□□ 1.14
VPS51-216ENST00000534591 DLG5Q8TDM6 1919 aa22.15■■□□□ 1.14
VPS51-216ENST00000534591 CT47B1P0C2W7 299 aaPredicted RBP22.15■■□□□ 1.14
VPS51-216ENST00000534591 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.14■■□□□ 1.13
VPS51-216ENST00000534591 LTV1Q96GA3 475 aaPredicted RBP22.14■■□□□ 1.13
VPS51-216ENST00000534591 STRN4Q9NRL3 753 aa22.14■■□□□ 1.13
VPS51-216ENST00000534591 COL5A2P05997 1499 aaPredicted RBP22.14■■□□□ 1.13
VPS51-216ENST00000534591 SPATA31A5Q5VU36 1347 aa22.13■■□□□ 1.13
VPS51-216ENST00000534591 SPATA31A7Q8IWB4 1347 aa22.13■■□□□ 1.13
VPS51-216ENST00000534591 WNK3Q9BYP7 1800 aa22.13■■□□□ 1.13
VPS51-216ENST00000534591 ZBTB7CA1YPR0 619 aa22.13■■□□□ 1.13
VPS51-216ENST00000534591 PPP4R2Q9NY27 417 aa22.13■■□□□ 1.13
VPS51-216ENST00000534591 ABCC6O95255 1503 aa22.13■■□□□ 1.13
VPS51-216ENST00000534591 FANCIQ9NVI1 1328 aa22.12■■□□□ 1.13
VPS51-216ENST00000534591 FAM98CQ17RN3 349 aaKnown RBP22.11■■□□□ 1.13
VPS51-216ENST00000534591 GAS2L2Q8NHY3 880 aa22.11■■□□□ 1.13
VPS51-216ENST00000534591 SEPT12Q8IYM1 358 aa22.11■■□□□ 1.13
VPS51-216ENST00000534591 IFT57Q9NWB7 429 aa22.11■■□□□ 1.13
VPS51-216ENST00000534591 GNAI1P63096 354 aa22.1■■□□□ 1.13
VPS51-216ENST00000534591 ONECUT3O60422 494 aaPredicted RBP22.09■■□□□ 1.13
VPS51-216ENST00000534591 SPATA31A1Q5TZJ5 1347 aa22.08■■□□□ 1.13
VPS51-216ENST00000534591 NCAPD2Q15021 1401 aa22.08■■□□□ 1.13
VPS51-216ENST00000534591 LARP1Q6PKG0 1096 aaKnown RBP22.08■■□□□ 1.13
VPS51-216ENST00000534591 ANKRD24Q8TF21 1146 aa22.08■■□□□ 1.13
VPS51-216ENST00000534591 HTATSF1O43719 755 aaKnown RBP22.07■■□□□ 1.12
VPS51-216ENST00000534591 ZNF853P0CG23 659 aa22.07■■□□□ 1.12
VPS51-216ENST00000534591 MTHFSDQ2M296 383 aaKnown RBP22.07■■□□□ 1.12
VPS51-216ENST00000534591 NBPF6Q5VWK0 638 aa22.07■■□□□ 1.12
VPS51-216ENST00000534591 TSR2Q969E8 191 aaKnown RBP22.07■■□□□ 1.12
VPS51-216ENST00000534591 NBPF4Q96M43 638 aa22.07■■□□□ 1.12
VPS51-216ENST00000534591 AXIN2Q9Y2T1 843 aa22.06■■□□□ 1.12
VPS51-216ENST00000534591 RARSP54136 660 aaKnown RBP22.06■■□□□ 1.12
VPS51-216ENST00000534591 CFAP44Q96MT7 982 aa22.06■■□□□ 1.12
VPS51-216ENST00000534591 USP35Q9P2H5 1018 aa22.06■■□□□ 1.12
VPS51-216ENST00000534591 PARP4Q9UKK3 1724 aaKnown RBP22.05■■□□□ 1.12
VPS51-216ENST00000534591 A0A0G2JS52 829 aa22.05■■□□□ 1.12
VPS51-216ENST00000534591 MYT1Q01538 1121 aa22.05■■□□□ 1.12
VPS51-216ENST00000534591 EXOSC9Q06265 439 aaKnown RBP22.05■■□□□ 1.12
VPS51-216ENST00000534591 THUMPD2Q9BTF0 503 aaKnown RBP22.05■■□□□ 1.12
VPS51-216ENST00000534591 PLIN1O60240 522 aa22.04■■□□□ 1.12
VPS51-216ENST00000534591 RTF1Q92541 710 aaKnown RBP22.04■■□□□ 1.12
VPS51-216ENST00000534591 ERBB3P21860 1342 aa22.04■■□□□ 1.12
VPS51-216ENST00000534591 EVA1CP58658 441 aa22.03■■□□□ 1.12
VPS51-216ENST00000534591 RGPD2P0DJD1 1756 aa22.02■■□□□ 1.12
VPS51-216ENST00000534591 BCAR3O75815 825 aa22.02■■□□□ 1.12
VPS51-216ENST00000534591 USHBP1Q8N6Y0 703 aa22.02■■□□□ 1.12
VPS51-216ENST00000534591 ZNF428Q96B54 188 aa22.02■■□□□ 1.12
VPS51-216ENST00000534591 LAS1LQ9Y4W2 734 aaKnown RBP22.02■■□□□ 1.12
VPS51-216ENST00000534591 LRRC37A3O60309 1634 aa22.02■■□□□ 1.12
VPS51-216ENST00000534591 CRB1P82279 1406 aa22.02■■□□□ 1.11
VPS51-216ENST00000534591 DCTN1Q14203 1278 aa22.01■■□□□ 1.11
VPS51-216ENST00000534591 KRT27Q7Z3Y8 459 aa22.01■■□□□ 1.11
VPS51-216ENST00000534591 GNAT3A8MTJ3 354 aa22■■□□□ 1.11
VPS51-216ENST00000534591 FAM182BQ5T319 152 aa22■■□□□ 1.11
VPS51-216ENST00000534591 PELP1Q8IZL8 1130 aaKnown RBP22■■□□□ 1.11
VPS51-216ENST00000534591 MBIPQ9NS73 344 aa22■■□□□ 1.11
VPS51-216ENST00000534591 FAM208AQ9UK61 1670 aaKnown RBP21.99■■□□□ 1.11
VPS51-216ENST00000534591 MAP3K5Q99683 1374 aa21.99■■□□□ 1.11
VPS51-216ENST00000534591 AMOTQ4VCS5 1084 aa21.99■■□□□ 1.11
VPS51-216ENST00000534591 MCM10Q7L590 875 aa21.99■■□□□ 1.11
VPS51-216ENST00000534591 TNS1Q9HBL0 1735 aaKnown RBP21.99■■□□□ 1.11
VPS51-216ENST00000534591 CHL1O00533 1208 aa21.98■■□□□ 1.11
VPS51-216ENST00000534591 PLEKHO1Q53GL0 409 aaPredicted RBP21.98■■□□□ 1.11
VPS51-216ENST00000534591 EXOC6Q8TAG9 804 aa21.98■■□□□ 1.11
VPS51-216ENST00000534591 PDE3AQ14432 1141 aa21.97■■□□□ 1.11
VPS51-216ENST00000534591 PLEKHG2Q9H7P9 1386 aa21.97■■□□□ 1.11
VPS51-216ENST00000534591 WDR17Q8IZU2 1322 aa21.96■■□□□ 1.11
VPS51-216ENST00000534591 ALDH1L2Q3SY69 923 aa21.96■■□□□ 1.11
VPS51-216ENST00000534591 BARGINQ6ZT62 677 aa21.96■■□□□ 1.11
VPS51-216ENST00000534591 CRBNQ96SW2 442 aa21.96■■□□□ 1.11
VPS51-216ENST00000534591 CANXP27824 592 aaKnown RBP21.95■■□□□ 1.1
VPS51-216ENST00000534591 C20orf194Q5TEA3 1177 aa21.94■■□□□ 1.1
VPS51-216ENST00000534591 TOM1L2Q6ZVM7 507 aa21.94■■□□□ 1.1
VPS51-216ENST00000534591 NLRP2Q9NX02 1062 aa21.94■■□□□ 1.1
VPS51-216ENST00000534591 CSB-PGBD3P0DP91 1061 aa21.93■■□□□ 1.1
VPS51-216ENST00000534591 BABAM1Q9NWV8 329 aa21.93■■□□□ 1.1
VPS51-216ENST00000534591 SBF2Q86WG5 1849 aa21.93■■□□□ 1.1
VPS51-216ENST00000534591 VAMP4O75379 141 aa21.92■■□□□ 1.1
VPS51-216ENST00000534591 AKAP4Q5JQC9 854 aa21.92■■□□□ 1.1
VPS51-216ENST00000534591 CCDC136Q96JN2 1154 aa21.92■■□□□ 1.1
VPS51-216ENST00000534591 SMC4Q9NTJ3 1288 aa21.92■■□□□ 1.1
VPS51-216ENST00000534591 BRPF1P55201 1214 aaPredicted RBP21.91■■□□□ 1.1
VPS51-216ENST00000534591 B4GALNT3Q6L9W6 998 aa21.91■■□□□ 1.1
VPS51-216ENST00000534591 SSH1Q8WYL5 1049 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms