RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 SMG6Q86US8 1419 aaKnown RBP12.31□□□□□ -0.44
COPB1-211ENST00000534234 TATP17735 454 aaPredicted RBP12.31□□□□□ -0.44
COPB1-211ENST00000534234 LRRC4BQ9NT99 713 aa12.31□□□□□ -0.44
COPB1-211ENST00000534234 ATF5Q9Y2D1 282 aaPredicted RBP12.31□□□□□ -0.44
COPB1-211ENST00000534234 SBF2Q86WG5 1849 aa12.31□□□□□ -0.44
COPB1-211ENST00000534234 KIF24Q5T7B8 1368 aa12.31□□□□□ -0.44
COPB1-211ENST00000534234 MEGF6O75095 1541 aa12.3□□□□□ -0.44
COPB1-211ENST00000534234 RGPD3A6NKT7 1758 aaPredicted RBP12.29□□□□□ -0.44
COPB1-211ENST00000534234 RGPD4Q7Z3J3 1758 aa12.29□□□□□ -0.44
COPB1-211ENST00000534234 SLC27A3Q5K4L6 730 aa12.29□□□□□ -0.44
COPB1-211ENST00000534234 WASHC2AQ641Q2 1341 aa12.28□□□□□ -0.44
COPB1-211ENST00000534234 PTGER2P43116 358 aa12.28□□□□□ -0.44
COPB1-211ENST00000534234 MTFR1LQ9H019 292 aa12.28□□□□□ -0.44
COPB1-211ENST00000534234 PANK3Q9H999 370 aa12.28□□□□□ -0.44
COPB1-211ENST00000534234 POLKQ9UBT6 870 aa12.28□□□□□ -0.44
COPB1-211ENST00000534234 TNNT2P45379 298 aaPredicted RBP12.27□□□□□ -0.44
COPB1-211ENST00000534234 KCNQ4P56696 695 aa12.27□□□□□ -0.44
COPB1-211ENST00000534234 ZNF827Q17R98 1081 aa12.27□□□□□ -0.44
COPB1-211ENST00000534234 NHSQ6T4R5 1651 aa12.27□□□□□ -0.45
COPB1-211ENST00000534234 DCAF8L1A6NGE4 600 aa12.26□□□□□ -0.45
COPB1-211ENST00000534234 PCDH11XQ9BZA7 1347 aa12.26□□□□□ -0.45
COPB1-211ENST00000534234 PCDH11YQ9BZA8 1340 aa12.26□□□□□ -0.45
COPB1-211ENST00000534234 FAM208AQ9UK61 1670 aaKnown RBP12.26□□□□□ -0.45
COPB1-211ENST00000534234 CYP27B1O15528 508 aa12.26□□□□□ -0.45
COPB1-211ENST00000534234 AKT1S1Q96B36 256 aa12.26□□□□□ -0.45
COPB1-211ENST00000534234 EYA1Q99502 592 aa12.26□□□□□ -0.45
COPB1-211ENST00000534234 NSD2O96028 1365 aa12.25□□□□□ -0.45
COPB1-211ENST00000534234 TFCP2L1Q9NZI6 479 aa12.25□□□□□ -0.45
COPB1-211ENST00000534234 CCNL1Q9UK58 526 aaPredicted RBP12.25□□□□□ -0.45
COPB1-211ENST00000534234 MPRIPQ6WCQ1 1025 aa12.24□□□□□ -0.45
COPB1-211ENST00000534234 SGIP1Q9BQI5 828 aa12.24□□□□□ -0.45
COPB1-211ENST00000534234 SPG7Q9UQ90 795 aa12.24□□□□□ -0.45
COPB1-211ENST00000534234 SLC16A10Q8TF71 515 aa12.23□□□□□ -0.45
COPB1-211ENST00000534234 FHDC1Q9C0D6 1143 aaPredicted RBP12.23□□□□□ -0.45
COPB1-211ENST00000534234 MYOM1P52179 1685 aa12.23□□□□□ -0.45
COPB1-211ENST00000534234 EIF4A2Q14240 407 aaKnown RBP12.22□□□□□ -0.45
COPB1-211ENST00000534234 ARXQ96QS3 562 aa12.22□□□□□ -0.45
COPB1-211ENST00000534234 SYT17Q9BSW7 474 aa12.22□□□□□ -0.45
COPB1-211ENST00000534234 CASZ1Q86V15 1759 aa12.22□□□□□ -0.45
COPB1-211ENST00000534234 BTAF1O14981 1849 aa12.22□□□□□ -0.45
COPB1-211ENST00000534234 NKX1-1Q15270 411 aaPredicted RBP12.22□□□□□ -0.45
COPB1-211ENST00000534234 MORC1Q86VD1 984 aa12.22□□□□□ -0.45
COPB1-211ENST00000534234 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.22□□□□□ -0.451e-7■■□□□ 14.3
COPB1-211ENST00000534234 KNSTRNQ9Y448 316 aa12.22□□□□□ -0.45
COPB1-211ENST00000534234 PNPLA7Q6ZV29 1317 aa12.21□□□□□ -0.45
COPB1-211ENST00000534234 RGPD2P0DJD1 1756 aa12.21□□□□□ -0.46
COPB1-211ENST00000534234 KIF20BQ96Q89 1820 aa12.2□□□□□ -0.46
COPB1-211ENST00000534234 HMGB2P26583 209 aaKnown RBP12.2□□□□□ -0.46
COPB1-211ENST00000534234 IFNL2Q8IZJ0 200 aa12.2□□□□□ -0.46
COPB1-211ENST00000534234 PIGBQ92521 554 aa12.2□□□□□ -0.46
COPB1-211ENST00000534234 NCAPD2Q15021 1401 aa12.2□□□□□ -0.46
COPB1-211ENST00000534234 YY1P25490 414 aa12.19□□□□□ -0.46
COPB1-211ENST00000534234 POLD1P28340 1107 aa12.19□□□□□ -0.46
COPB1-211ENST00000534234 SMARCC1Q92922 1105 aaPredicted RBP12.19□□□□□ -0.46
COPB1-211ENST00000534234 PAPPAQ13219 1627 aa12.19□□□□□ -0.46
COPB1-211ENST00000534234 PALLDQ8WX93 1383 aa12.18□□□□□ -0.46
COPB1-211ENST00000534234 PHKG2P15735 406 aa12.18□□□□□ -0.46
COPB1-211ENST00000534234 COL23A1Q86Y22 540 aaPredicted RBP12.18□□□□□ -0.46
COPB1-211ENST00000534234 TMOD3Q9NYL9 352 aa12.18□□□□□ -0.46
COPB1-211ENST00000534234 KAT6BQ8WYB5 2073 aa12.17□□□□□ -0.46
COPB1-211ENST00000534234 KIF7Q2M1P5 1343 aa12.17□□□□□ -0.46
COPB1-211ENST00000534234 IGSF1Q8N6C5 1336 aa12.17□□□□□ -0.46
COPB1-211ENST00000534234 DOT1LQ8TEK3 1739 aa12.16□□□□□ -0.46
COPB1-211ENST00000534234 SHANK3Q9BYB0 1731 aa12.16□□□□□ -0.46
COPB1-211ENST00000534234 PLEKHO1Q53GL0 409 aaPredicted RBP12.16□□□□□ -0.46
COPB1-211ENST00000534234 KLHL34Q8N239 644 aa12.16□□□□□ -0.46
COPB1-211ENST00000534234 AMER1Q5JTC6 1135 aaPredicted RBP12.15□□□□□ -0.46
COPB1-211ENST00000534234 FLAD1Q8NFF5 587 aa12.15□□□□□ -0.46
COPB1-211ENST00000534234 ASAP1Q9ULH1 1129 aa12.15□□□□□ -0.46
COPB1-211ENST00000534234 LOC102724428A0A0B4J2F2 783 aa12.14□□□□□ -0.47
COPB1-211ENST00000534234 SIK1P57059 783 aa12.14□□□□□ -0.47
COPB1-211ENST00000534234 MAP3K5Q99683 1374 aa12.14□□□□□ -0.47
COPB1-211ENST00000534234 PER1O15534 1290 aaPredicted RBP12.13□□□□□ -0.47
COPB1-211ENST00000534234 AMOTQ4VCS5 1084 aa12.13□□□□□ -0.47
COPB1-211ENST00000534234 AEBP1Q8IUX7 1158 aa12.13□□□□□ -0.47
COPB1-211ENST00000534234 AK7Q96M32 723 aa12.13□□□□□ -0.47
COPB1-211ENST00000534234 ERVV-2B6SEH9 535 aa12.13□□□□□ -0.47
COPB1-211ENST00000534234 HSP90AB1P08238 724 aaKnown RBP12.13□□□□□ -0.47
COPB1-211ENST00000534234 ATP6V1AP38606 617 aa12.13□□□□□ -0.47
COPB1-211ENST00000534234 MSL1Q68DK7 614 aa12.13□□□□□ -0.47
COPB1-211ENST00000534234 SULT6B1Q6IMI4 303 aa12.13□□□□□ -0.47
COPB1-211ENST00000534234 ZNF530Q6P9A1 599 aaPredicted RBP12.13□□□□□ -0.47
COPB1-211ENST00000534234 DCAF5Q96JK2 942 aa12.13□□□□□ -0.47
COPB1-211ENST00000534234 ATG3Q9NT62 314 aa12.13□□□□□ -0.47
COPB1-211ENST00000534234 PLEKHG2Q9H7P9 1386 aa12.12□□□□□ -0.47
COPB1-211ENST00000534234 ANKRD26Q9UPS8 1709 aa12.12□□□□□ -0.47
COPB1-211ENST00000534234 IL13P35225 146 aa12.12□□□□□ -0.47
COPB1-211ENST00000534234 MTHFSP49914 203 aa12.12□□□□□ -0.47
COPB1-211ENST00000534234 GPR162Q16538 588 aa12.12□□□□□ -0.47
COPB1-211ENST00000534234 LY75O60449 1722 aa12.12□□□□□ -0.47
COPB1-211ENST00000534234 MAP2P11137 1827 aaKnown RBP12.11□□□□□ -0.47
COPB1-211ENST00000534234 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.11□□□□□ -0.47
COPB1-211ENST00000534234 CC2D1BQ5T0F9 858 aaKnown RBP12.11□□□□□ -0.47
COPB1-211ENST00000534234 SMIM5Q71RC9 77 aa12.11□□□□□ -0.47
COPB1-211ENST00000534234 AMIGO3Q86WK7 504 aa12.11□□□□□ -0.47
COPB1-211ENST00000534234 LINC00116Q8NCU8 138 aa12.11□□□□□ -0.47
COPB1-211ENST00000534234 PHF14O94880 888 aa12.1□□□□□ -0.47
COPB1-211ENST00000534234 CABP4P57796 275 aa12.1□□□□□ -0.47
COPB1-211ENST00000534234 ITPK1Q13572 414 aa12.1□□□□□ -0.47
COPB1-211ENST00000534234 C1orf141Q5JVX7 400 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 846.4 ms