RNA–Protein interactions for RNA: ENST00000534070.5

CHEK1-216, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-216ENST00000534070 POLD1P28340 1107 aa7.97□□□□□ -1.13
CHEK1-216ENST00000534070 EPS8L1Q8TE68 723 aa7.97□□□□□ -1.13
CHEK1-216ENST00000534070 TUT1Q9H6E5 874 aaKnown RBP7.97□□□□□ -1.13
CHEK1-216ENST00000534070 CDHR5Q9HBB8 845 aa7.97□□□□□ -1.13
CHEK1-216ENST00000534070 PCDHGB7Q9Y5F8 929 aa7.97□□□□□ -1.13
CHEK1-216ENST00000534070 PPP1R3GB7ZBB8 358 aa7.97□□□□□ -1.13
CHEK1-216ENST00000534070 ARID4AP29374 1257 aaPredicted RBP7.97□□□□□ -1.13
CHEK1-216ENST00000534070 PTGDRQ13258 359 aa7.97□□□□□ -1.13
CHEK1-216ENST00000534070 TSPYL2Q9H2G4 693 aaPredicted RBP7.97□□□□□ -1.13
CHEK1-216ENST00000534070 DDX56Q9NY93 547 aaKnown RBP7.97□□□□□ -1.13
CHEK1-216ENST00000534070 VAMP1P23763 118 aa7.96□□□□□ -1.13
CHEK1-216ENST00000534070 CHST12Q9NRB3 414 aa7.96□□□□□ -1.13
CHEK1-216ENST00000534070 FAM217BQ9NTX9 383 aaPredicted RBP7.96□□□□□ -1.13
CHEK1-216ENST00000534070 MAPK1P28482 360 aa7.96□□□□□ -1.14
CHEK1-216ENST00000534070 NLRP6P59044 892 aa7.96□□□□□ -1.14
CHEK1-216ENST00000534070 GET4Q7L5D6 327 aaPredicted RBP7.96□□□□□ -1.14
CHEK1-216ENST00000534070 NOVA2Q9UNW9 492 aaKnown RBP7.96□□□□□ -1.14
CHEK1-216ENST00000534070 MAGI3Q5TCQ9 1506 aa7.96□□□□□ -1.14
CHEK1-216ENST00000534070 ALG2Q9H553 416 aa7.96□□□□□ -1.14
CHEK1-216ENST00000534070 MYBPC2Q14324 1141 aa7.95□□□□□ -1.14
CHEK1-216ENST00000534070 CRTC2Q53ET0 693 aaPredicted RBP7.95□□□□□ -1.14
CHEK1-216ENST00000534070 TMEM87AQ8NBN3 555 aa7.95□□□□□ -1.14
CHEK1-216ENST00000534070 TSC1Q92574 1164 aa7.95□□□□□ -1.14
CHEK1-216ENST00000534070 ODR4Q5SWX8 454 aa7.95□□□□□ -1.14
CHEK1-216ENST00000534070 NRBP1Q9UHY1 535 aa7.95□□□□□ -1.14
CHEK1-216ENST00000534070 ERCC6Q03468 1493 aa7.95□□□□□ -1.14
CHEK1-216ENST00000534070 VWDEQ8N2E2 1590 aa7.95□□□□□ -1.14
CHEK1-216ENST00000534070 NDUFV2P19404 249 aa7.95□□□□□ -1.14
CHEK1-216ENST00000534070 CNGB1Q14028 1251 aaPredicted RBP7.95□□□□□ -1.14
CHEK1-216ENST00000534070 RTL5Q5HYW3 569 aaPredicted RBP7.95□□□□□ -1.14
CHEK1-216ENST00000534070 THRAP3Q9Y2W1 955 aaKnown RBP7.95□□□□□ -1.14
CHEK1-216ENST00000534070 STK10O94804 968 aaKnown RBP7.94□□□□□ -1.14
CHEK1-216ENST00000534070 DSG2Q14126 1118 aa7.94□□□□□ -1.14
CHEK1-216ENST00000534070 FBXO9Q9UK97 447 aaPredicted RBP7.94□□□□□ -1.14
CHEK1-216ENST00000534070 KANK4Q5T7N3 995 aaPredicted RBP7.94□□□□□ -1.14
CHEK1-216ENST00000534070 IER2Q9BTL4 223 aa7.94□□□□□ -1.14
CHEK1-216ENST00000534070 SFMBT1Q9UHJ3 866 aa7.94□□□□□ -1.14
CHEK1-216ENST00000534070 NEFMP07197 916 aa7.94□□□□□ -1.14
CHEK1-216ENST00000534070 SYCP2LQ5T4T6 812 aa7.94□□□□□ -1.14
CHEK1-216ENST00000534070 CUEDC1Q9NWM3 386 aaPredicted RBP7.94□□□□□ -1.14
CHEK1-216ENST00000534070 PCDHB15Q9Y5E8 787 aa7.94□□□□□ -1.14
CHEK1-216ENST00000534070 SCAMP3O14828 347 aaKnown RBP7.93□□□□□ -1.14
CHEK1-216ENST00000534070 AMPD3Q01432 767 aa7.93□□□□□ -1.14
CHEK1-216ENST00000534070 TMEM259Q4ZIN3 620 aa7.93□□□□□ -1.14
CHEK1-216ENST00000534070 TRIM34Q9BYJ4 488 aa7.93□□□□□ -1.14
CHEK1-216ENST00000534070 KANSL2Q9H9L4 492 aa7.93□□□□□ -1.14
CHEK1-216ENST00000534070 ARMCX6Q7L4S7 300 aa7.92□□□□□ -1.14
CHEK1-216ENST00000534070 IL17RAQ96F46 866 aa7.92□□□□□ -1.14
CHEK1-216ENST00000534070 ZNF746Q6NUN9 644 aaPredicted RBP7.92□□□□□ -1.14
CHEK1-216ENST00000534070 ZNF710Q8N1W2 664 aa7.92□□□□□ -1.14
CHEK1-216ENST00000534070 SPC25Q9HBM1 224 aa7.92□□□□□ -1.14
CHEK1-216ENST00000534070 TCEAL9Q9UHQ7 104 aa7.92□□□□□ -1.14
CHEK1-216ENST00000534070 CTDP1Q9Y5B0 961 aaPredicted RBP7.92□□□□□ -1.14
CHEK1-216ENST00000534070 MRPL58Q14197 206 aaKnown RBP7.92□□□□□ -1.14
CHEK1-216ENST00000534070 RNF187Q5TA31 235 aaPredicted RBP7.92□□□□□ -1.14
CHEK1-216ENST00000534070 CABLES1Q8TDN4 633 aa7.92□□□□□ -1.14
CHEK1-216ENST00000534070 ARHGEF5Q12774 1597 aa7.92□□□□□ -1.14
CHEK1-216ENST00000534070 SOGA1O94964 1423 aa7.92□□□□□ -1.14
CHEK1-216ENST00000534070 IGF1RP08069 1367 aa7.92□□□□□ -1.14
CHEK1-216ENST00000534070 CCSER2Q9H7U1 834 aa7.91□□□□□ -1.14
CHEK1-216ENST00000534070 CREBZFQ9NS37 354 aa7.91□□□□□ -1.14
CHEK1-216ENST00000534070 UPF1Q92900 1129 aaKnown RBP eCLIP7.91□□□□□ -1.141e-11■■■■■ 61.6
CHEK1-216ENST00000534070 IFT172Q9UG01 1749 aa7.91□□□□□ -1.14
CHEK1-216ENST00000534070 CCDC85CA6NKD9 419 aa7.91□□□□□ -1.14
CHEK1-216ENST00000534070 GIGYF1O75420 1035 aaPredicted RBP7.91□□□□□ -1.14
CHEK1-216ENST00000534070 COMMD10Q9Y6G5 202 aa7.91□□□□□ -1.14
CHEK1-216ENST00000534070 HECW1Q76N89 1606 aa7.91□□□□□ -1.14
CHEK1-216ENST00000534070 ZNF394Q53GI3 561 aa7.9□□□□□ -1.14
CHEK1-216ENST00000534070 C10orf62Q5T681 223 aaPredicted RBP7.9□□□□□ -1.14
CHEK1-216ENST00000534070 OSBPL2Q9H1P3 480 aa7.9□□□□□ -1.14
CHEK1-216ENST00000534070 MROH1Q8NDA8 1641 aa7.9□□□□□ -1.14
CHEK1-216ENST00000534070 ABCC10Q5T3U5 1492 aa7.9□□□□□ -1.14
CHEK1-216ENST00000534070 TNFRSF10BO14763 440 aa7.9□□□□□ -1.14
CHEK1-216ENST00000534070 PPP4CP60510 307 aa7.9□□□□□ -1.14
CHEK1-216ENST00000534070 B4GALNT3Q6L9W6 998 aa7.9□□□□□ -1.14
CHEK1-216ENST00000534070 SETDB2Q96T68 719 aa7.9□□□□□ -1.14
CHEK1-216ENST00000534070 LDHAP00338 332 aaKnown RBP7.9□□□□□ -1.15
CHEK1-216ENST00000534070 LRRC41Q15345 812 aa7.9□□□□□ -1.15
CHEK1-216ENST00000534070 GAS2L2Q8NHY3 880 aa7.9□□□□□ -1.15
CHEK1-216ENST00000534070 ZNF512BQ96KM6 892 aaPredicted RBP7.9□□□□□ -1.15
CHEK1-216ENST00000534070 TTC37Q6PGP7 1564 aa7.89□□□□□ -1.15
CHEK1-216ENST00000534070 PTPN23Q9H3S7 1636 aa7.89□□□□□ -1.15
CHEK1-216ENST00000534070 DYTNA2CJ06 578 aa7.89□□□□□ -1.15
CHEK1-216ENST00000534070 FANCCQ00597 558 aa7.89□□□□□ -1.15
CHEK1-216ENST00000534070 FAM69CQ0P6D2 419 aa7.89□□□□□ -1.15
CHEK1-216ENST00000534070 PPP2R2DQ66LE6 453 aa7.89□□□□□ -1.15
CHEK1-216ENST00000534070 PRC1O43663 620 aa7.89□□□□□ -1.15
CHEK1-216ENST00000534070 EIF3JO75822 258 aaKnown RBP7.89□□□□□ -1.15
CHEK1-216ENST00000534070 CAPN12Q6ZSI9 719 aa7.89□□□□□ -1.15
CHEK1-216ENST00000534070 IPO4Q8TEX9 1081 aaKnown RBP7.89□□□□□ -1.15
CHEK1-216ENST00000534070 NEUROD6Q96NK8 337 aa7.89□□□□□ -1.15
CHEK1-216ENST00000534070 FAM126AQ9BYI3 521 aaPredicted RBP7.89□□□□□ -1.15
CHEK1-216ENST00000534070 ZBTB12Q9Y330 459 aaPredicted RBP7.89□□□□□ -1.15
CHEK1-216ENST00000534070 MAGI2Q86UL8 1455 aa7.89□□□□□ -1.15
CHEK1-216ENST00000534070 DHX16O60231 1041 aaKnown RBP7.89□□□□□ -1.15
CHEK1-216ENST00000534070 TTC39BQ5VTQ0 682 aaPredicted RBP7.89□□□□□ -1.15
CHEK1-216ENST00000534070 TTC30BQ8N4P2 665 aa7.89□□□□□ -1.15
CHEK1-216ENST00000534070 ARHGEF40Q8TER5 1519 aa7.88□□□□□ -1.15
CHEK1-216ENST00000534070 CFAP69A5D8W1 941 aa7.88□□□□□ -1.15
CHEK1-216ENST00000534070 P4HBP07237 508 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms