RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 USP4Q13107 963 aa8.34□□□□□ -1.07
ITGB1-219ENST00000534049 MAP7D1Q3KQU3 841 aa8.34□□□□□ -1.07
ITGB1-219ENST00000534049 ZNF395Q9H8N7 513 aaPredicted RBP8.34□□□□□ -1.07
ITGB1-219ENST00000534049 DOLKQ9UPQ8 538 aa8.34□□□□□ -1.07
ITGB1-219ENST00000534049 SOBPA7XYQ1 873 aa8.33□□□□□ -1.08
ITGB1-219ENST00000534049 GNRH1P01148 92 aa8.33□□□□□ -1.08
ITGB1-219ENST00000534049 CTSOP43234 321 aaPredicted RBP8.33□□□□□ -1.08
ITGB1-219ENST00000534049 RNF144AP50876 292 aaPredicted RBP8.33□□□□□ -1.08
ITGB1-219ENST00000534049 RNF217Q8TC41 542 aa8.33□□□□□ -1.08
ITGB1-219ENST00000534049 TRAK2O60296 914 aa8.32□□□□□ -1.08
ITGB1-219ENST00000534049 CLN3Q13286 438 aa8.32□□□□□ -1.08
ITGB1-219ENST00000534049 PHTF2Q8N3S3 785 aa8.32□□□□□ -1.08
ITGB1-219ENST00000534049 KDF1Q8NAX2 398 aaPredicted RBP8.32□□□□□ -1.08
ITGB1-219ENST00000534049 NLRP3Q96P20 1036 aa8.32□□□□□ -1.08
ITGB1-219ENST00000534049 CHIC2Q9UKJ5 165 aa8.32□□□□□ -1.08
ITGB1-219ENST00000534049 FIGNL2A6NMB9 653 aa8.31□□□□□ -1.08
ITGB1-219ENST00000534049 VSIG8P0DPA2 414 aa8.31□□□□□ -1.08
ITGB1-219ENST00000534049 INSM1Q01101 510 aaPredicted RBP8.31□□□□□ -1.08
ITGB1-219ENST00000534049 PTSQ03393 145 aa8.31□□□□□ -1.08
ITGB1-219ENST00000534049 LYSMD3Q7Z3D4 306 aa8.31□□□□□ -1.08
ITGB1-219ENST00000534049 CCDC85AQ96PX6 553 aaPredicted RBP8.31□□□□□ -1.08
ITGB1-219ENST00000534049 OSBPL3Q9H4L5 887 aa8.31□□□□□ -1.08
ITGB1-219ENST00000534049 A0A1W2PRU2 124 aa8.3□□□□□ -1.08
ITGB1-219ENST00000534049 PPFIA3O75145 1194 aa8.3□□□□□ -1.08
ITGB1-219ENST00000534049 SCTRP47872 440 aa8.3□□□□□ -1.08
ITGB1-219ENST00000534049 ESCO1Q5FWF5 840 aa8.3□□□□□ -1.08
ITGB1-219ENST00000534049 NFATC2IPQ8NCF5 419 aa8.3□□□□□ -1.08
ITGB1-219ENST00000534049 MEN1O00255 615 aa8.29□□□□□ -1.08
ITGB1-219ENST00000534049 LZTS3O60299 673 aaPredicted RBP8.29□□□□□ -1.08
ITGB1-219ENST00000534049 FOXD4L5Q5VV16 416 aaPredicted RBP8.29□□□□□ -1.08
ITGB1-219ENST00000534049 SLC35F4A4IF30 521 aa8.27□□□□□ -1.09
ITGB1-219ENST00000534049 VEGFBP49765 207 aa8.27□□□□□ -1.09
ITGB1-219ENST00000534049 WDR44Q5JSH3 913 aa8.27□□□□□ -1.09
ITGB1-219ENST00000534049 SLC27A3Q5K4L6 730 aa8.27□□□□□ -1.09
ITGB1-219ENST00000534049 CCDC155Q8N6L0 562 aa8.27□□□□□ -1.09
ITGB1-219ENST00000534049 PLPP7Q8NBV4 271 aa8.27□□□□□ -1.09
ITGB1-219ENST00000534049 POM121Q96HA1 1249 aa8.27□□□□□ -1.09
ITGB1-219ENST00000534049 ALG2Q9H553 416 aa8.27□□□□□ -1.09
ITGB1-219ENST00000534049 ARHGEF10LQ9HCE6 1279 aa8.27□□□□□ -1.09
ITGB1-219ENST00000534049 GTF2E1P29083 439 aaPredicted RBP8.26□□□□□ -1.09
ITGB1-219ENST00000534049 OXLD1Q5BKU9 147 aa8.26□□□□□ -1.09
ITGB1-219ENST00000534049 NANOS1Q8WY41 292 aaKnown RBP8.26□□□□□ -1.09
ITGB1-219ENST00000534049 ESYT1Q9BSJ8 1104 aa8.26□□□□□ -1.09
ITGB1-219ENST00000534049 CDCA7Q9BWT1 371 aaPredicted RBP8.26□□□□□ -1.09
ITGB1-219ENST00000534049 GMCL1Q96IK5 515 aa8.25□□□□□ -1.09
ITGB1-219ENST00000534049 SPATA31C2B4DYI2 1134 aa8.24□□□□□ -1.09
ITGB1-219ENST00000534049 ITGA6P23229 1130 aa8.24□□□□□ -1.09
ITGB1-219ENST00000534049 GMPRP36959 345 aa8.24□□□□□ -1.09
ITGB1-219ENST00000534049 EML3Q32P44 896 aa8.24□□□□□ -1.09
ITGB1-219ENST00000534049 CNKSR1Q969H4 720 aa8.24□□□□□ -1.09
ITGB1-219ENST00000534049 GRIP2Q9C0E4 1043 aa8.24□□□□□ -1.09
ITGB1-219ENST00000534049 PRICKLE2Q7Z3G6 844 aa8.23□□□□□ -1.09
ITGB1-219ENST00000534049 PROSER2Q86WR7 435 aaPredicted RBP8.23□□□□□ -1.09
ITGB1-219ENST00000534049 XAGE2Q96GT9 111 aa8.23□□□□□ -1.09
ITGB1-219ENST00000534049 ERBB4Q15303 1308 aa8.23□□□□□ -1.09
ITGB1-219ENST00000534049 FAM181BA6NEQ2 426 aa8.22□□□□□ -1.09
ITGB1-219ENST00000534049 A6NJR5 290 aa8.22□□□□□ -1.09
ITGB1-219ENST00000534049 LCE2CQ5TA81 110 aa8.22□□□□□ -1.09
ITGB1-219ENST00000534049 TAS1R3Q7RTX0 852 aa8.22□□□□□ -1.09
ITGB1-219ENST00000534049 DYRK1BQ9Y463 629 aa8.22□□□□□ -1.09
ITGB1-219ENST00000534049 SENP3-EIF4A1A0A087X0R7 540 aa8.21□□□□□ -1.1
ITGB1-219ENST00000534049 WASLO00401 505 aaPredicted RBP8.21□□□□□ -1.1
ITGB1-219ENST00000534049 IL2RAP01589 272 aa8.21□□□□□ -1.1
ITGB1-219ENST00000534049 SKIP12755 728 aa8.21□□□□□ -1.1
ITGB1-219ENST00000534049 GNASQ5JWF2 1037 aa8.21□□□□□ -1.1
ITGB1-219ENST00000534049 RAB6BQ9NRW1 208 aa8.21□□□□□ -1.1
ITGB1-219ENST00000534049 STK17AQ9UEE5 414 aa8.21□□□□□ -1.1
ITGB1-219ENST00000534049 NOD1Q9Y239 953 aa8.21□□□□□ -1.1
ITGB1-219ENST00000534049 H7C1W4 665 aa8.2□□□□□ -1.1
ITGB1-219ENST00000534049 CENPCQ03188 943 aa8.2□□□□□ -1.1
ITGB1-219ENST00000534049 TSGA10IPQ3SY00 556 aa8.2□□□□□ -1.1
ITGB1-219ENST00000534049 NBPF10Q6P3W6 841 aaKnown RBP8.2□□□□□ -1.1
ITGB1-219ENST00000534049 SV2AQ7L0J3 742 aa8.2□□□□□ -1.1
ITGB1-219ENST00000534049 NBPF15Q8N660 670 aa8.2□□□□□ -1.1
ITGB1-219ENST00000534049 ZSCAN10Q96SZ4 725 aaPredicted RBP8.2□□□□□ -1.1
ITGB1-219ENST00000534049 HRH3Q9Y5N1 445 aa8.2□□□□□ -1.1
ITGB1-219ENST00000534049 TRIM50Q86XT4 487 aa8.19□□□□□ -1.1
ITGB1-219ENST00000534049 USP17L5A8MUK1 530 aa8.18□□□□□ -1.1
ITGB1-219ENST00000534049 INHAP05111 366 aa8.18□□□□□ -1.1
ITGB1-219ENST00000534049 RHOQP17081 205 aa8.18□□□□□ -1.1
ITGB1-219ENST00000534049 GDF10P55107 478 aa8.18□□□□□ -1.1
ITGB1-219ENST00000534049 POU4F2Q12837 409 aa8.18□□□□□ -1.1
ITGB1-219ENST00000534049 TLR1Q15399 786 aa8.18□□□□□ -1.1
ITGB1-219ENST00000534049 HDGFL1Q5TGJ6 251 aa8.18□□□□□ -1.1
ITGB1-219ENST00000534049 TMEM214Q6NUQ4 689 aaKnown RBP8.18□□□□□ -1.1
ITGB1-219ENST00000534049 FOXR1Q6PIV2 292 aa8.18□□□□□ -1.1
ITGB1-219ENST00000534049 PLEKHM2Q8IWE5 1019 aa8.18□□□□□ -1.1
ITGB1-219ENST00000534049 FNBP4Q8N3X1 1017 aaPredicted RBP8.18□□□□□ -1.1
ITGB1-219ENST00000534049 ETNK1Q9HBU6 452 aa8.18□□□□□ -1.1
ITGB1-219ENST00000534049 TIMMDC1Q9NPL8 285 aa8.18□□□□□ -1.1
ITGB1-219ENST00000534049 A0A1B0GTH6 734 aa8.17□□□□□ -1.1
ITGB1-219ENST00000534049 CDC14CA4D256 554 aa8.17□□□□□ -1.1
ITGB1-219ENST00000534049 POM121CA8CG34 1229 aa8.17□□□□□ -1.1
ITGB1-219ENST00000534049 PIK3CDO00329 1044 aa8.17□□□□□ -1.1
ITGB1-219ENST00000534049 TRIM22Q8IYM9 498 aa8.17□□□□□ -1.1
ITGB1-219ENST00000534049 ZSCAN1Q8NBB4 408 aa8.17□□□□□ -1.1
ITGB1-219ENST00000534049 RHBDD1Q8TEB9 315 aa8.17□□□□□ -1.1
ITGB1-219ENST00000534049 CLUAP1Q96AJ1 413 aa8.17□□□□□ -1.1
ITGB1-219ENST00000534049 FHDC1Q9C0D6 1143 aaPredicted RBP8.17□□□□□ -1.1
ITGB1-219ENST00000534049 BACH1O14867 736 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms