RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 USHBP1Q8N6Y0 703 aa24.16■■□□□ 1.46
VPS51-213ENST00000533827 DOT1LQ8TEK3 1739 aa24.15■■□□□ 1.46
VPS51-213ENST00000533827 CGNL1Q0VF96 1302 aa24.15■■□□□ 1.46
VPS51-213ENST00000533827 EIF4G2P78344 907 aaKnown RBP eCLIP24.15■■□□□ 1.46
VPS51-213ENST00000533827 EMILIN1Q9Y6C2 1016 aa24.15■■□□□ 1.46
VPS51-213ENST00000533827 KAT6BQ8WYB5 2073 aa24.14■■□□□ 1.46
VPS51-213ENST00000533827 PPP1R1BQ9UD71 204 aaPredicted RBP24.14■■□□□ 1.45
VPS51-213ENST00000533827 ANKRD26Q9UPS8 1709 aa24.14■■□□□ 1.45
VPS51-213ENST00000533827 HSPA5P11021 654 aaKnown RBP24.13■■□□□ 1.45
VPS51-213ENST00000533827 RAPGEF4Q8WZA2 1011 aa24.13■■□□□ 1.45
VPS51-213ENST00000533827 LRRC4BQ9NT99 713 aa24.13■■□□□ 1.45
VPS51-213ENST00000533827 PRIM1P49642 420 aaKnown RBP24.12■■□□□ 1.45
VPS51-213ENST00000533827 NSD2O96028 1365 aa24.12■■□□□ 1.45
VPS51-213ENST00000533827 ZBTB7AO95365 584 aa24.11■■□□□ 1.45
VPS51-213ENST00000533827 POLR3GLQ9BT43 218 aa24.11■■□□□ 1.45
VPS51-213ENST00000533827 TATP17735 454 aaPredicted RBP24.1■■□□□ 1.45
VPS51-213ENST00000533827 SYTL4Q96C24 671 aaPredicted RBP24.1■■□□□ 1.45
VPS51-213ENST00000533827 PTGER2P43116 358 aa24.09■■□□□ 1.45
VPS51-213ENST00000533827 SLC27A3Q5K4L6 730 aa24.09■■□□□ 1.45
VPS51-213ENST00000533827 MAP2P11137 1827 aaKnown RBP24.09■■□□□ 1.45
VPS51-213ENST00000533827 LY75O60449 1722 aa24.08■■□□□ 1.45
VPS51-213ENST00000533827 ZNF827Q17R98 1081 aa24.08■■□□□ 1.45
VPS51-213ENST00000533827 NCAPD2Q15021 1401 aa24.08■■□□□ 1.44
VPS51-213ENST00000533827 WASHC2AQ641Q2 1341 aa24.08■■□□□ 1.44
VPS51-213ENST00000533827 ATF5Q9Y2D1 282 aaPredicted RBP24.07■■□□□ 1.44
VPS51-213ENST00000533827 PPM1GO15355 546 aaPredicted RBP24.06■■□□□ 1.44
VPS51-213ENST00000533827 AKT1S1Q96B36 256 aa24.06■■□□□ 1.44
VPS51-213ENST00000533827 MTFR1LQ9H019 292 aa24.06■■□□□ 1.44
VPS51-213ENST00000533827 POLKQ9UBT6 870 aa24.06■■□□□ 1.44
VPS51-213ENST00000533827 PCDH11XQ9BZA7 1347 aa24.06■■□□□ 1.44
VPS51-213ENST00000533827 PCDH11YQ9BZA8 1340 aa24.06■■□□□ 1.44
VPS51-213ENST00000533827 PANK3Q9H999 370 aa24.04■■□□□ 1.44
VPS51-213ENST00000533827 QSER1Q2KHR3 1735 aa24.04■■□□□ 1.44
VPS51-213ENST00000533827 PKD1L3Q7Z443 1732 aa24.04■■□□□ 1.44
VPS51-213ENST00000533827 SGIP1Q9BQI5 828 aa24.03■■□□□ 1.44
VPS51-213ENST00000533827 CYP27B1O15528 508 aa24.01■■□□□ 1.43
VPS51-213ENST00000533827 KCNQ4P56696 695 aa24.01■■□□□ 1.43
VPS51-213ENST00000533827 EYA1Q99502 592 aa24.01■■□□□ 1.43
VPS51-213ENST00000533827 TNNT2P45379 298 aaPredicted RBP23.98■■□□□ 1.43
VPS51-213ENST00000533827 TOGARAM1Q9Y4F4 1720 aa23.98■■□□□ 1.43
VPS51-213ENST00000533827 TUBGCP6Q96RT7 1819 aa23.98■■□□□ 1.43
VPS51-213ENST00000533827 PNPLA7Q6ZV29 1317 aa23.97■■□□□ 1.43
VPS51-213ENST00000533827 CCNL1Q9UK58 526 aaPredicted RBP23.97■■□□□ 1.43
VPS51-213ENST00000533827 SLC16A10Q8TF71 515 aa23.96■■□□□ 1.43
VPS51-213ENST00000533827 EIF4A2Q14240 407 aaKnown RBP23.95■■□□□ 1.42
VPS51-213ENST00000533827 NKX1-1Q15270 411 aaPredicted RBP23.95■■□□□ 1.42
VPS51-213ENST00000533827 FHDC1Q9C0D6 1143 aaPredicted RBP23.95■■□□□ 1.42
VPS51-213ENST00000533827 TFCP2L1Q9NZI6 479 aa23.95■■□□□ 1.42
VPS51-213ENST00000533827 SPG7Q9UQ90 795 aa23.95■■□□□ 1.42
VPS51-213ENST00000533827 ITGB4P16144 1822 aa23.95■■□□□ 1.42
VPS51-213ENST00000533827 COL24A1Q17RW2 1714 aa23.94■■□□□ 1.42
VPS51-213ENST00000533827 MPRIPQ6WCQ1 1025 aa23.94■■□□□ 1.42
VPS51-213ENST00000533827 SYT17Q9BSW7 474 aa23.94■■□□□ 1.42
VPS51-213ENST00000533827 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.94■■□□□ 1.42
VPS51-213ENST00000533827 ARXQ96QS3 562 aa23.93■■□□□ 1.42
VPS51-213ENST00000533827 DCAF8L1A6NGE4 600 aa23.92■■□□□ 1.42
VPS51-213ENST00000533827 C5P01031 1676 aa23.91■■□□□ 1.42
VPS51-213ENST00000533827 PALLDQ8WX93 1383 aa23.91■■□□□ 1.42
VPS51-213ENST00000533827 PLEKHG2Q9H7P9 1386 aa23.9■■□□□ 1.42
VPS51-213ENST00000533827 IGSF1Q8N6C5 1336 aa23.89■■□□□ 1.42
VPS51-213ENST00000533827 MAP3K5Q99683 1374 aa23.89■■□□□ 1.41
VPS51-213ENST00000533827 TAF1LQ8IZX4 1826 aa23.89■■□□□ 1.41
VPS51-213ENST00000533827 PHKG2P15735 406 aa23.88■■□□□ 1.41
VPS51-213ENST00000533827 MORC1Q86VD1 984 aa23.88■■□□□ 1.41
VPS51-213ENST00000533827 IFNL2Q8IZJ0 200 aa23.88■■□□□ 1.41
VPS51-213ENST00000533827 PIGBQ92521 554 aa23.88■■□□□ 1.41
VPS51-213ENST00000533827 KIF7Q2M1P5 1343 aa23.87■■□□□ 1.41
VPS51-213ENST00000533827 SMARCC1Q92922 1105 aaPredicted RBP23.87■■□□□ 1.41
VPS51-213ENST00000533827 KNSTRNQ9Y448 316 aa23.87■■□□□ 1.41
VPS51-213ENST00000533827 YY1P25490 414 aa23.86■■□□□ 1.41
VPS51-213ENST00000533827 HMGB2P26583 209 aaKnown RBP23.86■■□□□ 1.41
VPS51-213ENST00000533827 COL23A1Q86Y22 540 aaPredicted RBP23.86■■□□□ 1.41
VPS51-213ENST00000533827 POLD1P28340 1107 aa23.84■■□□□ 1.41
VPS51-213ENST00000533827 AMER1Q5JTC6 1135 aaPredicted RBP23.83■■□□□ 1.41
VPS51-213ENST00000533827 C4BP0C0L5 1744 aa23.82■■□□□ 1.4
VPS51-213ENST00000533827 TMOD3Q9NYL9 352 aa23.82■■□□□ 1.4
VPS51-213ENST00000533827 MSH5O43196 834 aa23.8■■□□□ 1.4
VPS51-213ENST00000533827 UTRNP46939 3433 aa23.8■■□□□ 1.4
VPS51-213ENST00000533827 FLAD1Q8NFF5 587 aa23.79■■□□□ 1.4
VPS51-213ENST00000533827 ASAP1Q9ULH1 1129 aa23.79■■□□□ 1.4
VPS51-213ENST00000533827 LOC102724428A0A0B4J2F2 783 aa23.78■■□□□ 1.4
VPS51-213ENST00000533827 PER1O15534 1290 aaPredicted RBP23.78■■□□□ 1.4
VPS51-213ENST00000533827 SIK1P57059 783 aa23.78■■□□□ 1.4
VPS51-213ENST00000533827 PLEKHO1Q53GL0 409 aaPredicted RBP23.78■■□□□ 1.4
VPS51-213ENST00000533827 IL13P35225 146 aa23.77■■□□□ 1.4
VPS51-213ENST00000533827 AMOTQ4VCS5 1084 aa23.77■■□□□ 1.4
VPS51-213ENST00000533827 AEBP1Q8IUX7 1158 aa23.77■■□□□ 1.4
VPS51-213ENST00000533827 AMIGO3Q86WK7 504 aa23.76■■□□□ 1.39
VPS51-213ENST00000533827 AK7Q96M32 723 aa23.76■■□□□ 1.39
VPS51-213ENST00000533827 ATG3Q9NT62 314 aa23.76■■□□□ 1.39
VPS51-213ENST00000533827 UBR3Q6ZT12 1888 aa23.76■■□□□ 1.39
VPS51-213ENST00000533827 ERVV-2B6SEH9 535 aa23.75■■□□□ 1.39
VPS51-213ENST00000533827 HSP90AB1P08238 724 aaKnown RBP23.75■■□□□ 1.39
VPS51-213ENST00000533827 KLHL34Q8N239 644 aa23.75■■□□□ 1.39
VPS51-213ENST00000533827 LINC00116Q8NCU8 138 aa23.75■■□□□ 1.39
VPS51-213ENST00000533827 DCAF5Q96JK2 942 aa23.75■■□□□ 1.39
VPS51-213ENST00000533827 KDRP35968 1356 aa23.75■■□□□ 1.39
VPS51-213ENST00000533827 MSL1Q68DK7 614 aa23.74■■□□□ 1.39
VPS51-213ENST00000533827 SULT6B1Q6IMI4 303 aa23.74■■□□□ 1.39
VPS51-213ENST00000533827 ITPK1Q13572 414 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms