RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 XPCQ01831 940 aaPredicted RBP36.15■■■■□ 3.38
SAMD1-202ENST00000533683 KCNH5Q8NCM2 988 aa36.15■■■■□ 3.38
SAMD1-202ENST00000533683 C19orf44Q9H6X5 657 aa36.15■■■■□ 3.38
SAMD1-202ENST00000533683 ABCC4O15439 1325 aa36.12■■■■□ 3.37
SAMD1-202ENST00000533683 ERICH6Q7L0X2 663 aa36.12■■■■□ 3.37
SAMD1-202ENST00000533683 HAP1P54257 671 aaPredicted RBP36.11■■■■□ 3.37
SAMD1-202ENST00000533683 C1orf167Q5SNV9 1468 aa36.11■■■■□ 3.37
SAMD1-202ENST00000533683 HTATSF1O43719 755 aaKnown RBP36.1■■■■□ 3.37
SAMD1-202ENST00000533683 MIS18AQ9NYP9 233 aa36.1■■■■□ 3.37
SAMD1-202ENST00000533683 NOP58Q9Y2X3 529 aaKnown RBP36.1■■■■□ 3.37
SAMD1-202ENST00000533683 ZBTB7BO15156 539 aaPredicted RBP36.09■■■■□ 3.37
SAMD1-202ENST00000533683 API5Q9BZZ5 524 aaKnown RBP36.08■■■■□ 3.37
SAMD1-202ENST00000533683 USHBP1Q8N6Y0 703 aa36.08■■■■□ 3.37
SAMD1-202ENST00000533683 GNAT3A8MTJ3 354 aa36.07■■■■□ 3.36
SAMD1-202ENST00000533683 PHRF1Q9P1Y6 1649 aaKnown RBP36.07■■■■□ 3.36
SAMD1-202ENST00000533683 TSPYL4Q9UJ04 414 aa36.06■■■■□ 3.36
SAMD1-202ENST00000533683 TRPM3Q9HCF6 1732 aaPredicted RBP36.06■■■■□ 3.36
SAMD1-202ENST00000533683 GCP02774 474 aa36.05■■■■□ 3.36
SAMD1-202ENST00000533683 KRT28Q7Z3Y7 464 aa36.05■■■■□ 3.36
SAMD1-202ENST00000533683 KIF1AQ12756 1690 aa36.05■■■■□ 3.36
SAMD1-202ENST00000533683 SLIT3O75094 1523 aa36.04■■■■□ 3.36
SAMD1-202ENST00000533683 STRCP1A6NGW2 1772 aa36.04■■■■□ 3.36
SAMD1-202ENST00000533683 ZBTB7CA1YPR0 619 aa36.04■■■■□ 3.36
SAMD1-202ENST00000533683 CHMP4BQ9H444 224 aaKnown RBP36.04■■■■□ 3.36
SAMD1-202ENST00000533683 LRRC37A3O60309 1634 aa36.04■■■■□ 3.36
SAMD1-202ENST00000533683 NBPF6Q5VWK0 638 aa36.03■■■■□ 3.36
SAMD1-202ENST00000533683 NBPF4Q96M43 638 aa36.03■■■■□ 3.36
SAMD1-202ENST00000533683 TMEM94Q12767 1356 aa36.03■■■■□ 3.36
SAMD1-202ENST00000533683 MSH6P52701 1360 aa36.02■■■■□ 3.36
SAMD1-202ENST00000533683 LMOD2Q6P5Q4 547 aa36.02■■■■□ 3.36
SAMD1-202ENST00000533683 MAP3K5Q99683 1374 aa36.02■■■■□ 3.36
SAMD1-202ENST00000533683 SMC5Q8IY18 1101 aa36.02■■■■□ 3.36
SAMD1-202ENST00000533683 ARHGEF25Q86VW2 580 aa36.01■■■■□ 3.36
SAMD1-202ENST00000533683 ZBTB47Q9UFB7 747 aaPredicted RBP36.01■■■■□ 3.36
SAMD1-202ENST00000533683 VIRMAQ69YN4 1812 aaKnown RBP36.01■■■■□ 3.35
SAMD1-202ENST00000533683 USP19O94966 1318 aa35.99■■■■□ 3.35
SAMD1-202ENST00000533683 PLEKHG5O94827 1062 aa35.99■■■■□ 3.35
SAMD1-202ENST00000533683 IL17REQ8NFR9 667 aa35.99■■■■□ 3.35
SAMD1-202ENST00000533683 ATF3P18847 181 aa35.98■■■■□ 3.35
SAMD1-202ENST00000533683 HSPA2P54652 639 aa35.98■■■■□ 3.35
SAMD1-202ENST00000533683 MST1RQ04912 1400 aa35.97■■■■□ 3.35
SAMD1-202ENST00000533683 RGPD2P0DJD1 1756 aa35.96■■■■□ 3.35
SAMD1-202ENST00000533683 RGS12O14924 1447 aa35.95■■■■□ 3.35
SAMD1-202ENST00000533683 LRRC59Q96AG4 307 aaKnown RBP35.93■■■■□ 3.34
SAMD1-202ENST00000533683 C1orf115Q9H7X2 142 aa35.93■■■■□ 3.34
SAMD1-202ENST00000533683 DCCP43146 1447 aa35.93■■■■□ 3.34
SAMD1-202ENST00000533683 NCOA3Q9Y6Q9 1424 aa35.93■■■■□ 3.34
SAMD1-202ENST00000533683 INTS3Q68E01 1043 aaKnown RBP35.92■■■■□ 3.34
SAMD1-202ENST00000533683 PTPRCP08575 1304 aa35.92■■■■□ 3.34
SAMD1-202ENST00000533683 SLC4A2P04920 1241 aa35.92■■■■□ 3.34
SAMD1-202ENST00000533683 ALS2Q96Q42 1657 aa35.89■■■■□ 3.34
SAMD1-202ENST00000533683 TAF7Q15545 349 aaPredicted RBP35.89■■■■□ 3.34
SAMD1-202ENST00000533683 BABAM1Q9NWV8 329 aa35.88■■■■□ 3.33
SAMD1-202ENST00000533683 NUCB1Q02818 461 aa35.86■■■■□ 3.33
SAMD1-202ENST00000533683 SIRT2Q8IXJ6 389 aa35.86■■■■□ 3.33
SAMD1-202ENST00000533683 ANKRD24Q8TF21 1146 aa35.86■■■■□ 3.33
SAMD1-202ENST00000533683 DDX17Q92841 729 aaKnown RBP35.85■■■■□ 3.33
SAMD1-202ENST00000533683 DDRGK1Q96HY6 314 aa35.85■■■■□ 3.33
SAMD1-202ENST00000533683 AXIN2Q9Y2T1 843 aa35.85■■■■□ 3.33
SAMD1-202ENST00000533683 CEMIPQ8WUJ3 1361 aa35.85■■■■□ 3.33
SAMD1-202ENST00000533683 NCAPD2Q15021 1401 aa35.84■■■■□ 3.33
SAMD1-202ENST00000533683 SEC24BO95487 1268 aa35.84■■■■□ 3.33
SAMD1-202ENST00000533683 CADPS2Q86UW7 1296 aa35.83■■■■□ 3.33
SAMD1-202ENST00000533683 MED1Q15648 1581 aaPredicted RBP35.82■■■■□ 3.33
SAMD1-202ENST00000533683 G2E3Q7L622 706 aa35.82■■■■□ 3.33
SAMD1-202ENST00000533683 GCC1Q96CN9 775 aa35.81■■■■□ 3.32
SAMD1-202ENST00000533683 CHD1LQ86WJ1 897 aa35.79■■■■□ 3.32
SAMD1-202ENST00000533683 LGR6Q9HBX8 967 aa35.79■■■■□ 3.32
SAMD1-202ENST00000533683 PLEKHO1Q53GL0 409 aaPredicted RBP35.79■■■■□ 3.32
SAMD1-202ENST00000533683 STK31Q9BXU1 1019 aa35.79■■■■□ 3.32
SAMD1-202ENST00000533683 ZC3H6P61129 1189 aaKnown RBP35.78■■■■□ 3.32
SAMD1-202ENST00000533683 SOS1Q07889 1333 aaPredicted RBP35.78■■■■□ 3.32
SAMD1-202ENST00000533683 CCDC30Q5VVM6 783 aa35.78■■■■□ 3.32
SAMD1-202ENST00000533683 ZNF530Q6P9A1 599 aaPredicted RBP35.78■■■■□ 3.32
SAMD1-202ENST00000533683 LNPKQ9C0E8 428 aa35.78■■■■□ 3.32
SAMD1-202ENST00000533683 RGPD5Q99666 1765 aa35.77■■■■□ 3.32
SAMD1-202ENST00000533683 LMO7Q8WWI1 1683 aa35.77■■■■□ 3.32
SAMD1-202ENST00000533683 CAMTA1Q9Y6Y1 1673 aa35.77■■■■□ 3.32
SAMD1-202ENST00000533683 AKAP4Q5JQC9 854 aa35.76■■■■□ 3.32
SAMD1-202ENST00000533683 AMOTQ4VCS5 1084 aa35.76■■■■□ 3.31
SAMD1-202ENST00000533683 NPHP3Q7Z494 1330 aa35.76■■■■□ 3.31
SAMD1-202ENST00000533683 FAM208AQ9UK61 1670 aaKnown RBP35.76■■■■□ 3.31
SAMD1-202ENST00000533683 ANKRD45Q5TZF3 282 aa35.73■■■■□ 3.31
SAMD1-202ENST00000533683 XIRP1Q702N8 1843 aaKnown RBP35.72■■■■□ 3.31
SAMD1-202ENST00000533683 ERBB3P21860 1342 aa35.72■■■■□ 3.31
SAMD1-202ENST00000533683 LMTK3Q96Q04 1460 aa35.72■■■■□ 3.31
SAMD1-202ENST00000533683 KDM4FA0A1W2PPD8 638 aa35.72■■■■□ 3.31
SAMD1-202ENST00000533683 F6X3S4 739 aa35.72■■■■□ 3.31
SAMD1-202ENST00000533683 NECTIN2Q92692 538 aa35.72■■■■□ 3.31
SAMD1-202ENST00000533683 PXDNQ92626 1479 aa35.71■■■■□ 3.31
SAMD1-202ENST00000533683 ATP10DQ9P241 1426 aa35.7■■■■□ 3.31
SAMD1-202ENST00000533683 MEIS3Q99687 375 aa35.7■■■■□ 3.31
SAMD1-202ENST00000533683 CACNA1FO60840 1977 aa35.7■■■■□ 3.31
SAMD1-202ENST00000533683 STRCQ7RTU9 1775 aa35.69■■■■□ 3.3
SAMD1-202ENST00000533683 FLIIQ13045 1269 aa35.69■■■■□ 3.3
SAMD1-202ENST00000533683 MPRIPQ6WCQ1 1025 aa35.69■■■■□ 3.3
SAMD1-202ENST00000533683 SLC4A10Q6U841 1118 aa35.69■■■■□ 3.3
SAMD1-202ENST00000533683 ANKRD44Q8N8A2 993 aa35.68■■■■□ 3.3
SAMD1-202ENST00000533683 TNS3Q68CZ2 1445 aa35.68■■■■□ 3.3
SAMD1-202ENST00000533683 CCT4P50991 539 aaKnown RBP35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms