RNA–Protein interactions for RNA: ENST00000533439.1

EIF3M-213, Transcript of eukaryotic translation initiation factor 3 subunit M, humanhuman

TSL 5

Gene EIF3M, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3M-213ENST00000533439 DDX54Q8TDD1 881 aaKnown RBP20.58■□□□□ 0.89
EIF3M-213ENST00000533439 SMG6Q86US8 1419 aaKnown RBP20.58■□□□□ 0.88
EIF3M-213ENST00000533439 CGNL1Q0VF96 1302 aa20.57■□□□□ 0.88
EIF3M-213ENST00000533439 TXNRD1Q16881 649 aa20.56■□□□□ 0.88
EIF3M-213ENST00000533439 KIF24Q5T7B8 1368 aa20.56■□□□□ 0.88
EIF3M-213ENST00000533439 PKD1L3Q7Z443 1732 aa20.56■□□□□ 0.88
EIF3M-213ENST00000533439 TOGARAM1Q9Y4F4 1720 aa20.54■□□□□ 0.88
EIF3M-213ENST00000533439 PDGFDQ9GZP0 370 aaPredicted RBP20.54■□□□□ 0.88
EIF3M-213ENST00000533439 PANK3Q9H999 370 aa20.54■□□□□ 0.88
EIF3M-213ENST00000533439 LY75O60449 1722 aa20.53■□□□□ 0.88
EIF3M-213ENST00000533439 PPM1GO15355 546 aaPredicted RBP20.53■□□□□ 0.88
EIF3M-213ENST00000533439 ZCRB1Q8TBF4 217 aaKnown RBP20.53■□□□□ 0.88
EIF3M-213ENST00000533439 NCAPD2Q15021 1401 aa20.53■□□□□ 0.88
EIF3M-213ENST00000533439 NSD2O96028 1365 aa20.52■□□□□ 0.88
EIF3M-213ENST00000533439 TUBGCP6Q96RT7 1819 aa20.52■□□□□ 0.88
EIF3M-213ENST00000533439 TNNT2P45379 298 aaPredicted RBP20.51■□□□□ 0.87
EIF3M-213ENST00000533439 POLKQ9UBT6 870 aa20.51■□□□□ 0.87
EIF3M-213ENST00000533439 ITGB4P16144 1822 aa20.5■□□□□ 0.87
EIF3M-213ENST00000533439 RAPGEF4Q8WZA2 1011 aa20.49■□□□□ 0.87
EIF3M-213ENST00000533439 WASHC2AQ641Q2 1341 aa20.49■□□□□ 0.87
EIF3M-213ENST00000533439 PRIM1P49642 420 aaKnown RBP20.48■□□□□ 0.87
EIF3M-213ENST00000533439 SYTL4Q96C24 671 aaPredicted RBP20.48■□□□□ 0.87
EIF3M-213ENST00000533439 LRRC4BQ9NT99 713 aa20.48■□□□□ 0.87
EIF3M-213ENST00000533439 KIF7Q2M1P5 1343 aa20.48■□□□□ 0.87
EIF3M-213ENST00000533439 TATP17735 454 aaPredicted RBP20.47■□□□□ 0.87
EIF3M-213ENST00000533439 SLC15A2Q16348 729 aa20.46■□□□□ 0.87
EIF3M-213ENST00000533439 QSER1Q2KHR3 1735 aa20.45■□□□□ 0.86
EIF3M-213ENST00000533439 KCNQ4P56696 695 aa20.45■□□□□ 0.86
EIF3M-213ENST00000533439 ZNF827Q17R98 1081 aa20.45■□□□□ 0.86
EIF3M-213ENST00000533439 EYA1Q99502 592 aa20.45■□□□□ 0.86
EIF3M-213ENST00000533439 STK32BQ9NY57 414 aa20.45■□□□□ 0.86
EIF3M-213ENST00000533439 CYP27B1O15528 508 aa20.44■□□□□ 0.86
EIF3M-213ENST00000533439 ZBTB7AO95365 584 aa20.43■□□□□ 0.86
EIF3M-213ENST00000533439 EIF4A2Q14240 407 aaKnown RBP20.43■□□□□ 0.86
EIF3M-213ENST00000533439 SPON1Q9HCB6 807 aa20.43■□□□□ 0.86
EIF3M-213ENST00000533439 PCDH11XQ9BZA7 1347 aa20.43■□□□□ 0.86
EIF3M-213ENST00000533439 PCDH11YQ9BZA8 1340 aa20.43■□□□□ 0.86
EIF3M-213ENST00000533439 TAF1LQ8IZX4 1826 aa20.41■□□□□ 0.86
EIF3M-213ENST00000533439 C5P01031 1676 aa20.4■□□□□ 0.86
EIF3M-213ENST00000533439 PTGER2P43116 358 aa20.38■□□□□ 0.85
EIF3M-213ENST00000533439 AMER1Q5JTC6 1135 aaPredicted RBP20.38■□□□□ 0.85
EIF3M-213ENST00000533439 MORC1Q86VD1 984 aa20.38■□□□□ 0.85
EIF3M-213ENST00000533439 ATF5Q9Y2D1 282 aaPredicted RBP20.38■□□□□ 0.85
EIF3M-213ENST00000533439 KNSTRNQ9Y448 316 aa20.38■□□□□ 0.85
EIF3M-213ENST00000533439 AKT1S1Q96B36 256 aa20.37■□□□□ 0.85
EIF3M-213ENST00000533439 IGSF1Q8N6C5 1336 aa20.36■□□□□ 0.85
EIF3M-213ENST00000533439 SLC27A3Q5K4L6 730 aa20.36■□□□□ 0.85
EIF3M-213ENST00000533439 PPP1R1BQ9UD71 204 aaPredicted RBP20.36■□□□□ 0.85
EIF3M-213ENST00000533439 COL24A1Q17RW2 1714 aa20.35■□□□□ 0.85
EIF3M-213ENST00000533439 MPRIPQ6WCQ1 1025 aa20.34■□□□□ 0.85
EIF3M-213ENST00000533439 PNPLA7Q6ZV29 1317 aa20.33■□□□□ 0.85
EIF3M-213ENST00000533439 CCNL1Q9UK58 526 aaPredicted RBP20.33■□□□□ 0.85
EIF3M-213ENST00000533439 SPG7Q9UQ90 795 aa20.33■□□□□ 0.85
EIF3M-213ENST00000533439 PALLDQ8WX93 1383 aa20.33■□□□□ 0.84
EIF3M-213ENST00000533439 PER1O15534 1290 aaPredicted RBP20.32■□□□□ 0.84
EIF3M-213ENST00000533439 NKX1-1Q15270 411 aaPredicted RBP20.32■□□□□ 0.84
EIF3M-213ENST00000533439 AEBP1Q8IUX7 1158 aa20.32■□□□□ 0.84
EIF3M-213ENST00000533439 SGIP1Q9BQI5 828 aa20.32■□□□□ 0.84
EIF3M-213ENST00000533439 MTFR1LQ9H019 292 aa20.32■□□□□ 0.84
EIF3M-213ENST00000533439 C4BP0C0L5 1744 aa20.3■□□□□ 0.84
EIF3M-213ENST00000533439 PHKG2P15735 406 aa20.3■□□□□ 0.84
EIF3M-213ENST00000533439 PIGBQ92521 554 aa20.3■□□□□ 0.84
EIF3M-213ENST00000533439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.3■□□□□ 0.843e-7■□□□□ 8.5
EIF3M-213ENST00000533439 VIRMAQ69YN4 1812 aaKnown RBP20.3■□□□□ 0.84
EIF3M-213ENST00000533439 UBR3Q6ZT12 1888 aa20.29■□□□□ 0.84
EIF3M-213ENST00000533439 CC2D1BQ5T0F9 858 aaKnown RBP20.28■□□□□ 0.84
EIF3M-213ENST00000533439 IFNL2Q8IZJ0 200 aa20.27■□□□□ 0.84
EIF3M-213ENST00000533439 TFCP2L1Q9NZI6 479 aa20.27■□□□□ 0.84
EIF3M-213ENST00000533439 KDM6AO15550 1401 aaPredicted RBP20.27■□□□□ 0.83
EIF3M-213ENST00000533439 PLEKHG2Q9H7P9 1386 aa20.26■□□□□ 0.83
EIF3M-213ENST00000533439 IL13P35225 146 aa20.26■□□□□ 0.83
EIF3M-213ENST00000533439 CNGB1Q14028 1251 aaPredicted RBP20.26■□□□□ 0.83
EIF3M-213ENST00000533439 FHDC1Q9C0D6 1143 aaPredicted RBP20.25■□□□□ 0.83
EIF3M-213ENST00000533439 SCN11AQ9UI33 1791 aa20.25■□□□□ 0.83
EIF3M-213ENST00000533439 KDRP35968 1356 aa20.24■□□□□ 0.83
EIF3M-213ENST00000533439 MTHFSP49914 203 aa20.24■□□□□ 0.83
EIF3M-213ENST00000533439 SULT6B1Q6IMI4 303 aa20.23■□□□□ 0.83
EIF3M-213ENST00000533439 AMIGO3Q86WK7 504 aa20.23■□□□□ 0.83
EIF3M-213ENST00000533439 TMOD3Q9NYL9 352 aa20.23■□□□□ 0.83
EIF3M-213ENST00000533439 ASAP1Q9ULH1 1129 aa20.23■□□□□ 0.83
EIF3M-213ENST00000533439 COL3A1P02461 1466 aaPredicted RBP20.23■□□□□ 0.83
EIF3M-213ENST00000533439 ZNF530Q6P9A1 599 aaPredicted RBP20.22■□□□□ 0.83
EIF3M-213ENST00000533439 COL23A1Q86Y22 540 aaPredicted RBP20.22■□□□□ 0.83
EIF3M-213ENST00000533439 PLEKHO1Q53GL0 409 aaPredicted RBP20.21■□□□□ 0.83
EIF3M-213ENST00000533439 SMIM5Q71RC9 77 aa20.21■□□□□ 0.83
EIF3M-213ENST00000533439 SMARCC1Q92922 1105 aaPredicted RBP20.21■□□□□ 0.83
EIF3M-213ENST00000533439 ARXQ96QS3 562 aa20.21■□□□□ 0.83
EIF3M-213ENST00000533439 COL5A3P25940 1745 aaPredicted RBP20.21■□□□□ 0.83
EIF3M-213ENST00000533439 NPC1L1Q9UHC9 1359 aa20.21■□□□□ 0.83
EIF3M-213ENST00000533439 SLC16A10Q8TF71 515 aa20.2■□□□□ 0.82
EIF3M-213ENST00000533439 SYT17Q9BSW7 474 aa20.2■□□□□ 0.82
EIF3M-213ENST00000533439 ATG3Q9NT62 314 aa20.2■□□□□ 0.82
EIF3M-213ENST00000533439 LOC102724428A0A0B4J2F2 783 aa20.19■□□□□ 0.82
EIF3M-213ENST00000533439 SIK1P57059 783 aa20.19■□□□□ 0.82
EIF3M-213ENST00000533439 ITPK1Q13572 414 aa20.19■□□□□ 0.82
EIF3M-213ENST00000533439 LINC00116Q8NCU8 138 aa20.19■□□□□ 0.82
EIF3M-213ENST00000533439 MSH5O43196 834 aa20.18■□□□□ 0.82
EIF3M-213ENST00000533439 HMOX1P09601 288 aa20.18■□□□□ 0.82
EIF3M-213ENST00000533439 MSL1Q68DK7 614 aa20.18■□□□□ 0.82
EIF3M-213ENST00000533439 ZNF831Q5JPB2 1677 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms