RNA–Protein interactions for RNA: ENST00000533059.5

CHID1-222, Transcript of chitinase domain containing 1, human

TSL 3

Gene CHID1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHID1-222	ENST00000533059	ACSBG1	Q96GR2	724 aa		18.66	■□□□□ 0.58
CHID1-222	ENST00000533059	CFAP53	Q96M91	514 aa		18.66	■□□□□ 0.58
CHID1-222	ENST00000533059	BCL9	O00512	1426 aa		18.66	■□□□□ 0.58
CHID1-222	ENST00000533059	SPG7	Q9UQ90	795 aa		18.65	■□□□□ 0.58
CHID1-222	ENST00000533059	IGSF1	Q8N6C5	1336 aa		18.65	■□□□□ 0.58
CHID1-222	ENST00000533059	NCAPD2	Q15021	1401 aa		18.65	■□□□□ 0.58
CHID1-222	ENST00000533059	DIAPH1	O60610	1272 aa	Known RBP	18.64	■□□□□ 0.57
CHID1-222	ENST00000533059	BCL11B	Q9C0K0	894 aa	Predicted RBP	18.64	■□□□□ 0.57
CHID1-222	ENST00000533059	SYTL4	Q96C24	671 aa	Predicted RBP	18.63	■□□□□ 0.57
CHID1-222	ENST00000533059	IL13	P35225	146 aa		18.62	■□□□□ 0.57
CHID1-222	ENST00000533059	SBF2	Q86WG5	1849 aa		18.62	■□□□□ 0.57
CHID1-222	ENST00000533059	NHS	Q6T4R5	1651 aa		18.61	■□□□□ 0.57
CHID1-222	ENST00000533059	PARD3	Q8TEW0	1356 aa		18.61	■□□□□ 0.57
CHID1-222	ENST00000533059	EZH2	Q15910	746 aa	Known RBP	18.61	■□□□□ 0.57
CHID1-222	ENST00000533059	SULT6B1	Q6IMI4	303 aa		18.61	■□□□□ 0.57
CHID1-222	ENST00000533059	U2SURP	O15042	1029 aa	Known RBP	18.6	■□□□□ 0.57
CHID1-222	ENST00000533059	SHANK3	Q9BYB0	1731 aa		18.6	■□□□□ 0.57
CHID1-222	ENST00000533059	PPP2R1A	P30153	589 aa		18.59	■□□□□ 0.57
CHID1-222	ENST00000533059	PKD1L3	Q7Z443	1732 aa		18.59	■□□□□ 0.57
CHID1-222	ENST00000533059	PLEKHG2	Q9H7P9	1386 aa		18.58	■□□□□ 0.57
CHID1-222	ENST00000533059	DOT1L	Q8TEK3	1739 aa		18.58	■□□□□ 0.57
CHID1-222	ENST00000533059	KCNQ2	O43526	872 aa		18.58	■□□□□ 0.56
CHID1-222	ENST00000533059	PLEKHO1	Q53GL0	409 aa	Predicted RBP	18.58	■□□□□ 0.56
CHID1-222	ENST00000533059	HMOX1	P09601	288 aa		18.57	■□□□□ 0.56
CHID1-222	ENST00000533059	AEBP1	Q8IUX7	1158 aa		18.57	■□□□□ 0.56
CHID1-222	ENST00000533059	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	18.57	■□□□□ 0.56
CHID1-222	ENST00000533059	NUDC	Q9Y266	331 aa		18.57	■□□□□ 0.56
CHID1-222	ENST00000533059	ZNF316	A6NFI3	1004 aa	Predicted RBP	18.56	■□□□□ 0.56
CHID1-222	ENST00000533059	AMOT	Q4VCS5	1084 aa		18.56	■□□□□ 0.56
CHID1-222	ENST00000533059	PTF1A	Q7RTS3	328 aa		18.56	■□□□□ 0.56
CHID1-222	ENST00000533059	IFNL2	Q8IZJ0	200 aa		18.56	■□□□□ 0.56
CHID1-222	ENST00000533059	CAMKK2	Q96RR4	588 aa		18.56	■□□□□ 0.56
CHID1-222	ENST00000533059	COL3A1	P02461	1466 aa	Predicted RBP	18.55	■□□□□ 0.56
CHID1-222	ENST00000533059	PLSCR1	O15162	318 aa		18.55	■□□□□ 0.56
CHID1-222	ENST00000533059	CYP27B1	O15528	508 aa		18.55	■□□□□ 0.56
CHID1-222	ENST00000533059	PRIM1	P49642	420 aa	Known RBP	18.55	■□□□□ 0.56
CHID1-222	ENST00000533059	C1orf141	Q5JVX7	400 aa		18.55	■□□□□ 0.56
CHID1-222	ENST00000533059	RALBP1	Q15311	655 aa		18.54	■□□□□ 0.56
CHID1-222	ENST00000533059	ZNF530	Q6P9A1	599 aa	Predicted RBP	18.54	■□□□□ 0.56
CHID1-222	ENST00000533059	KDR	P35968	1356 aa		18.54	■□□□□ 0.56
CHID1-222	ENST00000533059	RGPD3	A6NKT7	1758 aa	Predicted RBP	18.53	■□□□□ 0.56
CHID1-222	ENST00000533059	RGPD4	Q7Z3J3	1758 aa		18.53	■□□□□ 0.56
CHID1-222	ENST00000533059	HSP90AB1	P08238	724 aa	Known RBP	18.53	■□□□□ 0.56
CHID1-222	ENST00000533059	PHKG2	P15735	406 aa		18.53	■□□□□ 0.56
CHID1-222	ENST00000533059	NBPF14	Q5TI25	921 aa		18.53	■□□□□ 0.56
CHID1-222	ENST00000533059	RREB1	Q92766	1687 aa		18.53	■□□□□ 0.56
CHID1-222	ENST00000533059	NUP188	Q5SRE5	1749 aa		18.51	■□□□□ 0.55
CHID1-222	ENST00000533059	BTAF1	O14981	1849 aa		18.51	■□□□□ 0.55
CHID1-222	ENST00000533059	U2AF1L5	P0DN76	240 aa	Predicted RBP	18.5	■□□□□ 0.55
CHID1-222	ENST00000533059	U2AF1	Q01081	240 aa	Known RBP eCLIP	18.5	■□□□□ 0.55
CHID1-222	ENST00000533059	MPRIP	Q6WCQ1	1025 aa		18.5	■□□□□ 0.55
CHID1-222	ENST00000533059	TXNRD1	Q16881	649 aa		18.49	■□□□□ 0.55
CHID1-222	ENST00000533059	TMOD3	Q9NYL9	352 aa		18.49	■□□□□ 0.55
CHID1-222	ENST00000533059	MYBBP1A	Q9BQG0	1328 aa	Known RBP	18.49	■□□□□ 0.55
CHID1-222	ENST00000533059	PSD	A5PKW4	1024 aa	Predicted RBP	18.48	■□□□□ 0.55
CHID1-222	ENST00000533059	NKX1-1	Q15270	411 aa	Predicted RBP	18.48	■□□□□ 0.55
CHID1-222	ENST00000533059	NEFM	P07197	916 aa		18.47	■□□□□ 0.55
CHID1-222	ENST00000533059	R3HDM1	Q15032	1099 aa	Known RBP	18.47	■□□□□ 0.55
CHID1-222	ENST00000533059	DCAF5	Q96JK2	942 aa		18.47	■□□□□ 0.55
CHID1-222	ENST00000533059	TOGARAM1	Q9Y4F4	1720 aa		18.46	■□□□□ 0.55
CHID1-222	ENST00000533059	AKAP4	Q5JQC9	854 aa		18.46	■□□□□ 0.55
CHID1-222	ENST00000533059	PRKAR2B	P31323	418 aa		18.45	■□□□□ 0.54
CHID1-222	ENST00000533059	CABP4	P57796	275 aa		18.44	■□□□□ 0.54
CHID1-222	ENST00000533059	SLC27A3	Q5K4L6	730 aa		18.44	■□□□□ 0.54
CHID1-222	ENST00000533059	GAS2L2	Q8NHY3	880 aa		18.44	■□□□□ 0.54
CHID1-222	ENST00000533059	SMARCC1	Q92922	1105 aa	Predicted RBP	18.44	■□□□□ 0.54
CHID1-222	ENST00000533059	STK32B	Q9NY57	414 aa		18.44	■□□□□ 0.54
CHID1-222	ENST00000533059	PALLD	Q8WX93	1383 aa		18.43	■□□□□ 0.54
CHID1-222	ENST00000533059	KAT6B	Q8WYB5	2073 aa		18.43	■□□□□ 0.54
CHID1-222	ENST00000533059	MTHFSD	Q2M296	383 aa	Known RBP	18.43	■□□□□ 0.54
CHID1-222	ENST00000533059	CCNL1	Q9UK58	526 aa	Predicted RBP	18.43	■□□□□ 0.54
CHID1-222	ENST00000533059	ERVV-2	B6SEH9	535 aa		18.42	■□□□□ 0.54
CHID1-222	ENST00000533059	PIGB	Q92521	554 aa		18.42	■□□□□ 0.54
CHID1-222	ENST00000533059	RSPH6A	Q9H0K4	717 aa		18.42	■□□□□ 0.54
CHID1-222	ENST00000533059	PRKRIP1	Q9H875	184 aa	Predicted RBP	18.42	■□□□□ 0.54
CHID1-222	ENST00000533059	KDM6A	O15550	1401 aa	Predicted RBP	18.41	■□□□□ 0.54
CHID1-222	ENST00000533059	PROM2	Q8N271	834 aa		18.41	■□□□□ 0.54
CHID1-222	ENST00000533059	FCHSD2	O94868	740 aa		18.4	■□□□□ 0.54
CHID1-222	ENST00000533059	HMGB2	P26583	209 aa	Known RBP	18.4	■□□□□ 0.54
CHID1-222	ENST00000533059	PNN	Q9H307	717 aa	Known RBP	18.4	■□□□□ 0.54
CHID1-222	ENST00000533059	ANO8	Q9HCE9	1232 aa	Predicted RBP	18.4	■□□□□ 0.54
CHID1-222	ENST00000533059	ITGB4	P16144	1822 aa		18.39	■□□□□ 0.54
CHID1-222	ENST00000533059	MAPK8IP3	Q9UPT6	1336 aa		18.39	■□□□□ 0.53
CHID1-222	ENST00000533059	MAP3K5	Q99683	1374 aa		18.39	■□□□□ 0.53
CHID1-222	ENST00000533059	ANP32C	O43423	234 aa		18.38	■□□□□ 0.53
CHID1-222	ENST00000533059	WDR43	Q15061	677 aa	Known RBP eCLIP	18.38	■□□□□ 0.53
CHID1-222	ENST00000533059	LY75	O60449	1722 aa		18.37	■□□□□ 0.53
CHID1-222	ENST00000533059	GNAT3	A8MTJ3	354 aa		18.37	■□□□□ 0.53
CHID1-222	ENST00000533059	KCNQ4	P56696	695 aa		18.37	■□□□□ 0.53
CHID1-222	ENST00000533059	SLC15A2	Q16348	729 aa		18.37	■□□□□ 0.53
CHID1-222	ENST00000533059	LRRC4B	Q9NT99	713 aa		18.37	■□□□□ 0.53
CHID1-222	ENST00000533059	RNMT	O43148	476 aa	Known RBP	18.36	■□□□□ 0.53
CHID1-222	ENST00000533059	RTF1	Q92541	710 aa	Known RBP	18.36	■□□□□ 0.53
CHID1-222	ENST00000533059	ASAP1	Q9ULH1	1129 aa		18.36	■□□□□ 0.53
CHID1-222	ENST00000533059	PAPPA	Q13219	1627 aa		18.35	■□□□□ 0.53
CHID1-222	ENST00000533059	TEF	Q10587	303 aa		18.35	■□□□□ 0.53
CHID1-222	ENST00000533059	NFATC2IP	Q8NCF5	419 aa		18.35	■□□□□ 0.53
CHID1-222	ENST00000533059	RBM42	Q9BTD8	480 aa	Known RBP	18.35	■□□□□ 0.53
CHID1-222	ENST00000533059	LOC102724428	A0A0B4J2F2	783 aa		18.34	■□□□□ 0.53
CHID1-222	ENST00000533059	SIK1	P57059	783 aa		18.34	■□□□□ 0.53

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