RNA–Protein interactions for RNA: ENST00000532909.5

CHID1-220, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-220ENST00000532909 WDR43Q15061 677 aaKnown RBP eCLIP26.5■■□□□ 1.83
CHID1-220ENST00000532909 PNISRQ8TF01 805 aaKnown RBP26.5■■□□□ 1.83
CHID1-220ENST00000532909 ANO8Q9HCE9 1232 aaPredicted RBP26.5■■□□□ 1.83
CHID1-220ENST00000532909 RGPD3A6NKT7 1758 aaPredicted RBP26.5■■□□□ 1.83
CHID1-220ENST00000532909 RGPD4Q7Z3J3 1758 aa26.5■■□□□ 1.83
CHID1-220ENST00000532909 KCNQ2O43526 872 aa26.49■■□□□ 1.83
CHID1-220ENST00000532909 IP6K1Q92551 441 aa26.49■■□□□ 1.83
CHID1-220ENST00000532909 ACSBG1Q96GR2 724 aa26.49■■□□□ 1.83
CHID1-220ENST00000532909 SPON1Q9HCB6 807 aa26.49■■□□□ 1.83
CHID1-220ENST00000532909 PPP1R1BQ9UD71 204 aaPredicted RBP26.48■■□□□ 1.83
CHID1-220ENST00000532909 RTL1A6NKG5 1358 aa26.47■■□□□ 1.83
CHID1-220ENST00000532909 PROM2Q8N271 834 aa26.47■■□□□ 1.83
CHID1-220ENST00000532909 POLKQ9UBT6 870 aa26.47■■□□□ 1.83
CHID1-220ENST00000532909 AMPHP49418 695 aa26.46■■□□□ 1.83
CHID1-220ENST00000532909 TXNRD1Q16881 649 aa26.46■■□□□ 1.83
CHID1-220ENST00000532909 MAP3K19Q56UN5 1328 aa26.45■■□□□ 1.83
CHID1-220ENST00000532909 FBLN1P23142 703 aa26.45■■□□□ 1.82
CHID1-220ENST00000532909 PNNQ9H307 717 aaKnown RBP26.44■■□□□ 1.82
CHID1-220ENST00000532909 FLT4P35916 1363 aa26.44■■□□□ 1.82
CHID1-220ENST00000532909 HOXC9P31274 260 aa26.42■■□□□ 1.82
CHID1-220ENST00000532909 STK32BQ9NY57 414 aa26.42■■□□□ 1.82
CHID1-220ENST00000532909 CCDC184Q52MB2 194 aa26.41■■□□□ 1.82
CHID1-220ENST00000532909 FAM9BQ8IZU0 186 aa26.41■■□□□ 1.82
CHID1-220ENST00000532909 DDX54Q8TDD1 881 aaKnown RBP26.41■■□□□ 1.82
CHID1-220ENST00000532909 MAP2P11137 1827 aaKnown RBP26.4■■□□□ 1.82
CHID1-220ENST00000532909 DIAPH1O60610 1272 aaKnown RBP26.4■■□□□ 1.82
CHID1-220ENST00000532909 NHSQ6T4R5 1651 aa26.39■■□□□ 1.82
CHID1-220ENST00000532909 PDGFDQ9GZP0 370 aaPredicted RBP26.39■■□□□ 1.82
CHID1-220ENST00000532909 KAT6BQ8WYB5 2073 aa26.38■■□□□ 1.81
CHID1-220ENST00000532909 RRS1Q15050 365 aaKnown RBP26.38■■□□□ 1.81
CHID1-220ENST00000532909 ZBTB7AO95365 584 aa26.37■■□□□ 1.81
CHID1-220ENST00000532909 NGEFQ8N5V2 710 aa26.37■■□□□ 1.81
CHID1-220ENST00000532909 FAM208AQ9UK61 1670 aaKnown RBP26.36■■□□□ 1.81
CHID1-220ENST00000532909 PPM1GO15355 546 aaPredicted RBP26.36■■□□□ 1.81
CHID1-220ENST00000532909 SLC15A2Q16348 729 aa26.36■■□□□ 1.81
CHID1-220ENST00000532909 COL3A1P02461 1466 aaPredicted RBP26.36■■□□□ 1.81
CHID1-220ENST00000532909 EMILIN1Q9Y6C2 1016 aa26.35■■□□□ 1.81
CHID1-220ENST00000532909 ATF5Q9Y2D1 282 aaPredicted RBP26.32■■□□□ 1.8
CHID1-220ENST00000532909 CASZ1Q86V15 1759 aa26.32■■□□□ 1.8
CHID1-220ENST00000532909 BTAF1O14981 1849 aa26.31■■□□□ 1.8
CHID1-220ENST00000532909 NEFMP07197 916 aa26.31■■□□□ 1.8
CHID1-220ENST00000532909 SYTL4Q96C24 671 aaPredicted RBP26.31■■□□□ 1.8
CHID1-220ENST00000532909 ZCRB1Q8TBF4 217 aaKnown RBP26.3■■□□□ 1.8
CHID1-220ENST00000532909 USHBP1Q8N6Y0 703 aa26.29■■□□□ 1.8
CHID1-220ENST00000532909 DCAF8L1A6NGE4 600 aa26.28■■□□□ 1.8
CHID1-220ENST00000532909 NCBP3Q53F19 620 aaKnown RBP26.28■■□□□ 1.8
CHID1-220ENST00000532909 NBPF6Q5VWK0 638 aa26.28■■□□□ 1.8
CHID1-220ENST00000532909 NBPF4Q96M43 638 aa26.28■■□□□ 1.8
CHID1-220ENST00000532909 ADAMTS8Q9UP79 889 aa26.28■■□□□ 1.8
CHID1-220ENST00000532909 RGPD2P0DJD1 1756 aa26.28■■□□□ 1.8
CHID1-220ENST00000532909 FCHSD2O94868 740 aa26.27■■□□□ 1.8
CHID1-220ENST00000532909 U2AF1L5P0DN76 240 aaPredicted RBP26.27■■□□□ 1.8
CHID1-220ENST00000532909 U2AF1Q01081 240 aaKnown RBP eCLIP26.27■■□□□ 1.8
CHID1-220ENST00000532909 MEGF6O75095 1541 aa26.27■■□□□ 1.8
CHID1-220ENST00000532909 IL13P35225 146 aa26.26■■□□□ 1.79
CHID1-220ENST00000532909 PRIM1P49642 420 aaKnown RBP26.26■■□□□ 1.79
CHID1-220ENST00000532909 RAPGEF4Q8WZA2 1011 aa26.26■■□□□ 1.79
CHID1-220ENST00000532909 U2SURPO15042 1029 aaKnown RBP26.25■■□□□ 1.79
CHID1-220ENST00000532909 HSP90AB2PQ58FF8 381 aa26.25■■□□□ 1.79
CHID1-220ENST00000532909 LRRC4BQ9NT99 713 aa26.25■■□□□ 1.79
CHID1-220ENST00000532909 CENPBP07199 599 aaPredicted RBP26.24■■□□□ 1.79
CHID1-220ENST00000532909 HNRNPUQ00839 825 aaKnown RBP eCLIP26.24■■□□□ 1.79
CHID1-220ENST00000532909 PTGER2P43116 358 aa26.23■■□□□ 1.79
CHID1-220ENST00000532909 ZNF827Q17R98 1081 aa26.23■■□□□ 1.79
CHID1-220ENST00000532909 RUNDC1Q96C34 613 aa26.23■■□□□ 1.79
CHID1-220ENST00000532909 MTFR1LQ9H019 292 aa26.23■■□□□ 1.79
CHID1-220ENST00000532909 EIF4A2Q14240 407 aaKnown RBP26.22■■□□□ 1.79
CHID1-220ENST00000532909 YTHDC1Q96MU7 727 aaKnown RBP26.22■■□□□ 1.79
CHID1-220ENST00000532909 TATP17735 454 aaPredicted RBP26.21■■□□□ 1.79
CHID1-220ENST00000532909 ZBED9Q6R2W3 1325 aa26.2■■□□□ 1.79
CHID1-220ENST00000532909 KCNQ4P56696 695 aa26.2■■□□□ 1.78
CHID1-220ENST00000532909 SLC27A3Q5K4L6 730 aa26.2■■□□□ 1.78
CHID1-220ENST00000532909 PAPPAQ13219 1627 aa26.2■■□□□ 1.78
CHID1-220ENST00000532909 DOT1LQ8TEK3 1739 aa26.19■■□□□ 1.78
CHID1-220ENST00000532909 MAPK8IP3Q9UPT6 1336 aa26.19■■□□□ 1.78
CHID1-220ENST00000532909 PLEKHG2Q9H7P9 1386 aa26.19■■□□□ 1.78
CHID1-220ENST00000532909 YY1P25490 414 aa26.18■■□□□ 1.78
CHID1-220ENST00000532909 SHANK3Q9BYB0 1731 aa26.17■■□□□ 1.78
CHID1-220ENST00000532909 IGSF1Q8N6C5 1336 aa26.16■■□□□ 1.78
CHID1-220ENST00000532909 FHDC1Q9C0D6 1143 aaPredicted RBP26.16■■□□□ 1.78
CHID1-220ENST00000532909 AKT1S1Q96B36 256 aa26.15■■□□□ 1.78
CHID1-220ENST00000532909 TFCP2L1Q9NZI6 479 aa26.14■■□□□ 1.78
CHID1-220ENST00000532909 KDRP35968 1356 aa26.14■■□□□ 1.78
CHID1-220ENST00000532909 PCDH11XQ9BZA7 1347 aa26.14■■□□□ 1.77
CHID1-220ENST00000532909 PCDH11YQ9BZA8 1340 aa26.14■■□□□ 1.77
CHID1-220ENST00000532909 ARXQ96QS3 562 aa26.13■■□□□ 1.77
CHID1-220ENST00000532909 CCNL1Q9UK58 526 aaPredicted RBP26.13■■□□□ 1.77
CHID1-220ENST00000532909 SGIP1Q9BQI5 828 aa26.12■■□□□ 1.77
CHID1-220ENST00000532909 SYT17Q9BSW7 474 aa26.12■■□□□ 1.77
CHID1-220ENST00000532909 RSPH6AQ9H0K4 717 aa26.12■■□□□ 1.77
CHID1-220ENST00000532909 CCDC27Q2M243 656 aa26.09■■□□□ 1.77
CHID1-220ENST00000532909 SULT6B1Q6IMI4 303 aa26.09■■□□□ 1.77
CHID1-220ENST00000532909 PLEKHF1Q96S99 279 aa26.09■■□□□ 1.77
CHID1-220ENST00000532909 PNPLA7Q6ZV29 1317 aa26.09■■□□□ 1.77
CHID1-220ENST00000532909 NCAPD2Q15021 1401 aa26.08■■□□□ 1.77
CHID1-220ENST00000532909 PRKAR2BP31323 418 aa26.08■■□□□ 1.77
CHID1-220ENST00000532909 LMOD3Q0VAK6 560 aa26.08■■□□□ 1.77
CHID1-220ENST00000532909 EYA1Q99502 592 aa26.08■■□□□ 1.77
CHID1-220ENST00000532909 MPRIPQ6WCQ1 1025 aa26.07■■□□□ 1.76
CHID1-220ENST00000532909 KLHL34Q8N239 644 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms