RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 TTLL12Q14166 644 aaPredicted RBP12.66□□□□□ -0.38
CDC27-208ENST00000532575 PARP9Q8IXQ6 854 aa12.66□□□□□ -0.38
CDC27-208ENST00000532575 RNF40O75150 1001 aa12.65□□□□□ -0.38
CDC27-208ENST00000532575 RXRBP28702 533 aa12.65□□□□□ -0.38
CDC27-208ENST00000532575 SLF2Q8IX21 1173 aa12.65□□□□□ -0.38
CDC27-208ENST00000532575 CHD2O14647 1828 aaKnown RBP12.65□□□□□ -0.39
CDC27-208ENST00000532575 TRIM52Q96A61 297 aa12.64□□□□□ -0.39
CDC27-208ENST00000532575 AMOTL2Q9Y2J4 779 aa12.64□□□□□ -0.39
CDC27-208ENST00000532575 ADAMTS13Q76LX8 1427 aa12.63□□□□□ -0.39
CDC27-208ENST00000532575 TMEM131LA2VDJ0 1609 aa12.63□□□□□ -0.39
CDC27-208ENST00000532575 COL16A1Q07092 1604 aaPredicted RBP12.63□□□□□ -0.39
CDC27-208ENST00000532575 NUTM2DQ5VT03 806 aaPredicted RBP12.63□□□□□ -0.39
CDC27-208ENST00000532575 HPS5Q9UPZ3 1129 aa12.63□□□□□ -0.39
CDC27-208ENST00000532575 DIP2AQ14689 1571 aa12.62□□□□□ -0.39
CDC27-208ENST00000532575 GIGYF2Q6Y7W6 1299 aaKnown RBP12.62□□□□□ -0.39
CDC27-208ENST00000532575 BRINP3Q76B58 766 aa12.62□□□□□ -0.39
CDC27-208ENST00000532575 AHDC1Q5TGY3 1603 aaPredicted RBP12.62□□□□□ -0.39
CDC27-208ENST00000532575 NUTM2BA6NNL0 878 aaPredicted RBP12.61□□□□□ -0.39
CDC27-208ENST00000532575 DDX11L8A8MPP1 907 aa12.61□□□□□ -0.39
CDC27-208ENST00000532575 NUTM2EB1AL46 878 aaPredicted RBP12.61□□□□□ -0.39
CDC27-208ENST00000532575 SLC4A3P48751 1232 aa12.61□□□□□ -0.39
CDC27-208ENST00000532575 NUTM2AQ8IVF1 878 aaPredicted RBP12.61□□□□□ -0.39
CDC27-208ENST00000532575 FAM217BQ9NTX9 383 aaPredicted RBP12.61□□□□□ -0.39
CDC27-208ENST00000532575 TSR3Q9UJK0 312 aaKnown RBP12.61□□□□□ -0.39
CDC27-208ENST00000532575 LRP6O75581 1613 aa12.61□□□□□ -0.39
CDC27-208ENST00000532575 SLC10A3P09131 477 aa12.6□□□□□ -0.39
CDC27-208ENST00000532575 LRRC59Q96AG4 307 aaKnown RBP12.6□□□□□ -0.39
CDC27-208ENST00000532575 DCCP43146 1447 aa12.6□□□□□ -0.39
CDC27-208ENST00000532575 ROCK1Q13464 1354 aa12.59□□□□□ -0.39
CDC27-208ENST00000532575 TRPM2O94759 1503 aa12.59□□□□□ -0.39
CDC27-208ENST00000532575 GCC2Q8IWJ2 1684 aa12.59□□□□□ -0.39
CDC27-208ENST00000532575 PTPN5P54829 565 aa12.59□□□□□ -0.39
CDC27-208ENST00000532575 SULF1Q8IWU6 871 aa12.59□□□□□ -0.39
CDC27-208ENST00000532575 GPBP1L1Q9HC44 474 aaPredicted RBP12.59□□□□□ -0.39
CDC27-208ENST00000532575 WBP1LQ9NX94 342 aa12.59□□□□□ -0.39
CDC27-208ENST00000532575 CDK12Q9NYV4 1490 aaPredicted RBP12.59□□□□□ -0.39
CDC27-208ENST00000532575 NUP155O75694 1391 aa12.58□□□□□ -0.4
CDC27-208ENST00000532575 PPP4CP60510 307 aa12.58□□□□□ -0.4
CDC27-208ENST00000532575 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.58□□□□□ -0.4
CDC27-208ENST00000532575 SETD1AO15047 1707 aaKnown RBP12.57□□□□□ -0.4
CDC27-208ENST00000532575 SETD5Q9C0A6 1442 aa12.57□□□□□ -0.4
CDC27-208ENST00000532575 SSTR3P32745 418 aaPredicted RBP12.57□□□□□ -0.4
CDC27-208ENST00000532575 BRPF1P55201 1214 aaPredicted RBP12.57□□□□□ -0.4
CDC27-208ENST00000532575 RDH13Q8NBN7 331 aa12.57□□□□□ -0.4
CDC27-208ENST00000532575 SHPRHQ149N8 1683 aa12.57□□□□□ -0.4
CDC27-208ENST00000532575 AFF2P51816 1311 aa12.57□□□□□ -0.4
CDC27-208ENST00000532575 UNC13BO14795 1591 aa12.56□□□□□ -0.4
CDC27-208ENST00000532575 MYO5BQ9ULV0 1848 aa12.56□□□□□ -0.4
CDC27-208ENST00000532575 NEUROD2Q15784 382 aa12.56□□□□□ -0.4
CDC27-208ENST00000532575 ZNF326Q5BKZ1 582 aaKnown RBP12.56□□□□□ -0.4
CDC27-208ENST00000532575 PTPRUQ92729 1446 aa12.55□□□□□ -0.4
CDC27-208ENST00000532575 MS4A1P11836 297 aa12.55□□□□□ -0.4
CDC27-208ENST00000532575 CD46P15529 392 aa12.55□□□□□ -0.4
CDC27-208ENST00000532575 RBM6P78332 1123 aaKnown RBP12.55□□□□□ -0.4
CDC27-208ENST00000532575 QTRT2Q9H974 415 aaKnown RBP12.55□□□□□ -0.4
CDC27-208ENST00000532575 NECTIN2Q92692 538 aa12.54□□□□□ -0.4
CDC27-208ENST00000532575 C8orf37Q96NL8 207 aa12.54□□□□□ -0.4
CDC27-208ENST00000532575 KDM4CQ9H3R0 1056 aa12.54□□□□□ -0.4
CDC27-208ENST00000532575 ASXL1Q8IXJ9 1541 aa12.53□□□□□ -0.4
CDC27-208ENST00000532575 NGLY1Q96IV0 654 aa12.53□□□□□ -0.4
CDC27-208ENST00000532575 HCSTQ9UBK5 93 aa12.53□□□□□ -0.4
CDC27-208ENST00000532575 E9PCH4 1651 aa12.53□□□□□ -0.4
CDC27-208ENST00000532575 MST1RQ04912 1400 aa12.53□□□□□ -0.4
CDC27-208ENST00000532575 IQGAP3Q86VI3 1631 aa12.52□□□□□ -0.4
CDC27-208ENST00000532575 CFHP08603 1231 aa12.52□□□□□ -0.41
CDC27-208ENST00000532575 APLP1P51693 650 aa12.51□□□□□ -0.41
CDC27-208ENST00000532575 METP08581 1390 aa12.51□□□□□ -0.41
CDC27-208ENST00000532575 SETBP1Q9Y6X0 1596 aa12.51□□□□□ -0.41
CDC27-208ENST00000532575 ITGAEP38570 1179 aa12.5□□□□□ -0.41
CDC27-208ENST00000532575 GCGRP47871 477 aa12.5□□□□□ -0.41
CDC27-208ENST00000532575 PNPLA6Q8IY17 1366 aa12.5□□□□□ -0.41
CDC27-208ENST00000532575 ADGRL3Q9HAR2 1447 aa12.5□□□□□ -0.41
CDC27-208ENST00000532575 NYAP1Q6ZVC0 841 aa12.49□□□□□ -0.41
CDC27-208ENST00000532575 PLSCR2Q9NRY7 297 aa12.49□□□□□ -0.41
CDC27-208ENST00000532575 ADAMTS2O95450 1211 aa12.48□□□□□ -0.41
CDC27-208ENST00000532575 KMT5BQ4FZB7 885 aa12.48□□□□□ -0.41
CDC27-208ENST00000532575 DDX17Q92841 729 aaKnown RBP12.48□□□□□ -0.41
CDC27-208ENST00000532575 BEGAINQ9BUH8 593 aa12.48□□□□□ -0.41
CDC27-208ENST00000532575 XRN1Q8IZH2 1706 aaKnown RBP12.48□□□□□ -0.41
CDC27-208ENST00000532575 TRPC5Q9UL62 973 aaPredicted RBP12.47□□□□□ -0.41
CDC27-208ENST00000532575 NHSL1Q5SYE7 1610 aa12.47□□□□□ -0.41
CDC27-208ENST00000532575 RGS12O14924 1447 aa12.46□□□□□ -0.41
CDC27-208ENST00000532575 PRR14Q9BWN1 585 aa12.46□□□□□ -0.41
CDC27-208ENST00000532575 USP21Q9UK80 565 aa12.46□□□□□ -0.41
CDC27-208ENST00000532575 C1orf167Q5SNV9 1468 aa12.46□□□□□ -0.42
CDC27-208ENST00000532575 ATAD2Q6PL18 1390 aa12.45□□□□□ -0.42
CDC27-208ENST00000532575 SOS2Q07890 1332 aaPredicted RBP12.45□□□□□ -0.42
CDC27-208ENST00000532575 ACTN4O43707 911 aaKnown RBP12.45□□□□□ -0.42
CDC27-208ENST00000532575 FAM117AQ9C073 453 aa12.45□□□□□ -0.42
CDC27-208ENST00000532575 NRXN3Q9Y4C0 1643 aa12.44□□□□□ -0.42
CDC27-208ENST00000532575 FNBP4Q8N3X1 1017 aaPredicted RBP12.44□□□□□ -0.42
CDC27-208ENST00000532575 CCDC125Q86Z20 511 aa12.43□□□□□ -0.42
CDC27-208ENST00000532575 ORAI2Q96SN7 254 aa12.43□□□□□ -0.42
CDC27-208ENST00000532575 PTCH1Q13635 1447 aa12.43□□□□□ -0.42
CDC27-208ENST00000532575 RPGRIP1LQ68CZ1 1315 aa12.42□□□□□ -0.42
CDC27-208ENST00000532575 KDM4AO75164 1064 aa12.42□□□□□ -0.42
CDC27-208ENST00000532575 FUT2Q10981 343 aa12.42□□□□□ -0.42
CDC27-208ENST00000532575 SPHKAPQ2M3C7 1700 aa12.41□□□□□ -0.42
CDC27-208ENST00000532575 NEXMIFQ5QGS0 1516 aa12.41□□□□□ -0.42
CDC27-208ENST00000532575 ROBO2Q9HCK4 1378 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms