RNA–Protein interactions for RNA: ENST00000532443.1

PPFIA1-221, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 4

Gene PPFIA1, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-221ENST00000532443 EMILIN1Q9Y6C2 1016 aa8.43□□□□□ -1.06
PPFIA1-221ENST00000532443 TDRD9Q8NDG6 1382 aaKnown RBP8.43□□□□□ -1.06
PPFIA1-221ENST00000532443 TARBP1Q13395 1621 aaKnown RBP8.43□□□□□ -1.06
PPFIA1-221ENST00000532443 GIGYF1O75420 1035 aaPredicted RBP8.42□□□□□ -1.06
PPFIA1-221ENST00000532443 VAC14Q08AM6 782 aa8.42□□□□□ -1.06
PPFIA1-221ENST00000532443 MRPL14Q6P1L8 145 aaKnown RBP8.42□□□□□ -1.06
PPFIA1-221ENST00000532443 POM121Q96HA1 1249 aa8.42□□□□□ -1.06
PPFIA1-221ENST00000532443 CLIP1P30622 1438 aa8.42□□□□□ -1.06
PPFIA1-221ENST00000532443 ABCA5Q8WWZ7 1642 aa8.42□□□□□ -1.06
PPFIA1-221ENST00000532443 THOC2Q8NI27 1593 aaKnown RBP8.41□□□□□ -1.06
PPFIA1-221ENST00000532443 ERVH48-1M5A8F1 160 aa8.41□□□□□ -1.06
PPFIA1-221ENST00000532443 ZFP42Q96MM3 310 aa8.41□□□□□ -1.06
PPFIA1-221ENST00000532443 PGPEP1Q9NXJ5 209 aa8.41□□□□□ -1.06
PPFIA1-221ENST00000532443 DHX9Q08211 1270 aaKnown RBP8.4□□□□□ -1.06
PPFIA1-221ENST00000532443 TRIM47Q96LD4 638 aa8.4□□□□□ -1.06
PPFIA1-221ENST00000532443 SENP2Q9HC62 589 aa8.4□□□□□ -1.06
PPFIA1-221ENST00000532443 COG6Q9Y2V7 657 aa8.4□□□□□ -1.06
PPFIA1-221ENST00000532443 ZNF330Q9Y3S2 320 aaPredicted RBP8.4□□□□□ -1.06
PPFIA1-221ENST00000532443 BMP2P12643 396 aa8.39□□□□□ -1.07
PPFIA1-221ENST00000532443 SCARF1Q14162 830 aa8.39□□□□□ -1.07
PPFIA1-221ENST00000532443 MEIOBQ8N635 442 aa8.39□□□□□ -1.07
PPFIA1-221ENST00000532443 ZNF784Q8NCA9 323 aaPredicted RBP8.39□□□□□ -1.07
PPFIA1-221ENST00000532443 AGBL1Q96MI9 1066 aa8.39□□□□□ -1.07
PPFIA1-221ENST00000532443 CYLDQ9NQC7 956 aa8.39□□□□□ -1.07
PPFIA1-221ENST00000532443 GRIN2BQ13224 1484 aa8.38□□□□□ -1.07
PPFIA1-221ENST00000532443 SOBPA7XYQ1 873 aa8.38□□□□□ -1.07
PPFIA1-221ENST00000532443 ESPNB1AK53 854 aa8.38□□□□□ -1.07
PPFIA1-221ENST00000532443 LINC00528Q8N1L1 170 aa8.38□□□□□ -1.07
PPFIA1-221ENST00000532443 UPP2O95045 317 aa8.37□□□□□ -1.07
PPFIA1-221ENST00000532443 ZNF775Q96BV0 537 aaPredicted RBP8.37□□□□□ -1.07
PPFIA1-221ENST00000532443 AQRO60306 1485 aaKnown RBP eCLIP8.37□□□□□ -1.07
PPFIA1-221ENST00000532443 FHAD1B1AJZ9 1412 aa8.37□□□□□ -1.07
PPFIA1-221ENST00000532443 RELBQ01201 579 aa8.36□□□□□ -1.07
PPFIA1-221ENST00000532443 FLIIQ13045 1269 aa8.36□□□□□ -1.07
PPFIA1-221ENST00000532443 KIFC2Q96AC6 838 aa8.36□□□□□ -1.07
PPFIA1-221ENST00000532443 RAD21O60216 631 aa8.35□□□□□ -1.07
PPFIA1-221ENST00000532443 EIF4G2P78344 907 aaKnown RBP eCLIP8.35□□□□□ -1.07
PPFIA1-221ENST00000532443 TRIM26Q12899 539 aaPredicted RBP8.35□□□□□ -1.07
PPFIA1-221ENST00000532443 PCDHB11Q9Y5F2 797 aa8.35□□□□□ -1.07
PPFIA1-221ENST00000532443 PBRM1Q86U86 1689 aa8.34□□□□□ -1.07
PPFIA1-221ENST00000532443 ADD1P35611 737 aaKnown RBP8.34□□□□□ -1.07
PPFIA1-221ENST00000532443 TSEN34Q9BSV6 310 aaKnown RBP8.34□□□□□ -1.07
PPFIA1-221ENST00000532443 ZNF395Q9H8N7 513 aaPredicted RBP8.34□□□□□ -1.07
PPFIA1-221ENST00000532443 VPS8Q8N3P4 1428 aa8.34□□□□□ -1.07
PPFIA1-221ENST00000532443 LILRA1O75019 489 aa8.33□□□□□ -1.08
PPFIA1-221ENST00000532443 RANGAP1P46060 587 aaPredicted RBP8.33□□□□□ -1.08
PPFIA1-221ENST00000532443 Q6ZVU0 165 aa8.33□□□□□ -1.08
PPFIA1-221ENST00000532443 SEPT12Q8IYM1 358 aa8.33□□□□□ -1.08
PPFIA1-221ENST00000532443 CEP126Q9P2H0 1117 aa8.33□□□□□ -1.08
PPFIA1-221ENST00000532443 ZNF608Q9ULD9 1512 aaPredicted RBP8.33□□□□□ -1.08
PPFIA1-221ENST00000532443 MAGI1Q96QZ7 1491 aaPredicted RBP8.32□□□□□ -1.08
PPFIA1-221ENST00000532443 MCCD1P59942 119 aaPredicted RBP8.32□□□□□ -1.08
PPFIA1-221ENST00000532443 RNF20Q5VTR2 975 aa8.32□□□□□ -1.08
PPFIA1-221ENST00000532443 CLUAP1Q96AJ1 413 aa8.32□□□□□ -1.08
PPFIA1-221ENST00000532443 EIF4G3O43432 1585 aaKnown RBP8.31□□□□□ -1.08
PPFIA1-221ENST00000532443 ADAMTS12P58397 1594 aa8.31□□□□□ -1.08
PPFIA1-221ENST00000532443 FIGNL2A6NMB9 653 aa8.31□□□□□ -1.08
PPFIA1-221ENST00000532443 ADH1AP07327 375 aa8.31□□□□□ -1.08
PPFIA1-221ENST00000532443 SCTRP47872 440 aa8.31□□□□□ -1.08
PPFIA1-221ENST00000532443 WASHC4Q2M389 1173 aa8.31□□□□□ -1.08
PPFIA1-221ENST00000532443 ZNF592Q92610 1267 aa8.31□□□□□ -1.08
PPFIA1-221ENST00000532443 CCDC85AQ96PX6 553 aaPredicted RBP8.31□□□□□ -1.08
PPFIA1-221ENST00000532443 EFCAB5A4FU69 1503 aa8.3□□□□□ -1.08
PPFIA1-221ENST00000532443 MAN1A2O60476 641 aa8.3□□□□□ -1.08
PPFIA1-221ENST00000532443 VEGFBP49765 207 aa8.3□□□□□ -1.08
PPFIA1-221ENST00000532443 SEMA3FQ13275 785 aa8.3□□□□□ -1.08
PPFIA1-221ENST00000532443 TSGA10IPQ3SY00 556 aa8.3□□□□□ -1.08
PPFIA1-221ENST00000532443 WWC1Q8IX03 1113 aa8.3□□□□□ -1.08
PPFIA1-221ENST00000532443 INSM2Q96T92 566 aaPredicted RBP8.3□□□□□ -1.08
PPFIA1-221ENST00000532443 CDCA7Q9BWT1 371 aaPredicted RBP8.3□□□□□ -1.08
PPFIA1-221ENST00000532443 POLMQ9NP87 494 aaPredicted RBP8.3□□□□□ -1.08
PPFIA1-221ENST00000532443 ARHGAP35Q9NRY4 1499 aa8.3□□□□□ -1.08
PPFIA1-221ENST00000532443 CTTNBP2Q8WZ74 1663 aa8.3□□□□□ -1.08
PPFIA1-221ENST00000532443 POM121CA8CG34 1229 aa8.29□□□□□ -1.08
PPFIA1-221ENST00000532443 SLFNL1Q499Z3 407 aa8.29□□□□□ -1.08
PPFIA1-221ENST00000532443 RNF135Q8IUD6 432 aa8.29□□□□□ -1.08
PPFIA1-221ENST00000532443 CHMP7Q8WUX9 453 aaPredicted RBP8.29□□□□□ -1.08
PPFIA1-221ENST00000532443 PCGF6Q9BYE7 350 aa8.29□□□□□ -1.08
PPFIA1-221ENST00000532443 ESF1Q9H501 851 aaKnown RBP8.29□□□□□ -1.08
PPFIA1-221ENST00000532443 SNAPC4Q5SXM2 1469 aa8.29□□□□□ -1.08
PPFIA1-221ENST00000532443 SYNJ2O15056 1496 aa8.28□□□□□ -1.08
PPFIA1-221ENST00000532443 ARAP1Q96P48 1450 aa8.28□□□□□ -1.08
PPFIA1-221ENST00000532443 TTLL8A6PVC2 850 aa8.28□□□□□ -1.08
PPFIA1-221ENST00000532443 SPINT1O43278 529 aa8.28□□□□□ -1.08
PPFIA1-221ENST00000532443 CTSOP43234 321 aaPredicted RBP8.28□□□□□ -1.08
PPFIA1-221ENST00000532443 CC2D2BQ6DHV5 1058 aa8.28□□□□□ -1.08
PPFIA1-221ENST00000532443 DNMT3LQ9UJW3 386 aa8.28□□□□□ -1.08
PPFIA1-221ENST00000532443 SOS2Q07890 1332 aaPredicted RBP8.28□□□□□ -1.08
PPFIA1-221ENST00000532443 PIK3CDO00329 1044 aa8.27□□□□□ -1.09
PPFIA1-221ENST00000532443 PTGIRP43119 386 aa8.27□□□□□ -1.09
PPFIA1-221ENST00000532443 ERVK-9P63128 1117 aa8.27□□□□□ -1.09
PPFIA1-221ENST00000532443 OXLD1Q5BKU9 147 aa8.27□□□□□ -1.09
PPFIA1-221ENST00000532443 KDF1Q8NAX2 398 aaPredicted RBP8.27□□□□□ -1.09
PPFIA1-221ENST00000532443 DOLKQ9UPQ8 538 aa8.27□□□□□ -1.09
PPFIA1-221ENST00000532443 GRIN2AQ12879 1464 aa8.26□□□□□ -1.09
PPFIA1-221ENST00000532443 ATP5J2-PTCD1G3V325 749 aa8.26□□□□□ -1.09
PPFIA1-221ENST00000532443 KIAA0586Q9BVV6 1533 aa8.25□□□□□ -1.09
PPFIA1-221ENST00000532443 MEN1O00255 615 aa8.25□□□□□ -1.09
PPFIA1-221ENST00000532443 OSBPL3Q9H4L5 887 aa8.25□□□□□ -1.09
PPFIA1-221ENST00000532443 FMN1Q68DA7 1419 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms