RNA–Protein interactions for RNA: ENST00000531660.5

NR1H3-233, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-233ENST00000531660 RGPD4Q7Z3J3 1758 aa22.99■■□□□ 1.27
NR1H3-233ENST00000531660 EIF4A2Q14240 407 aaKnown RBP22.97■■□□□ 1.27
NR1H3-233ENST00000531660 DDX54Q8TDD1 881 aaKnown RBP22.97■■□□□ 1.27
NR1H3-233ENST00000531660 EYA1Q99502 592 aa22.97■■□□□ 1.27
NR1H3-233ENST00000531660 NHSQ6T4R5 1651 aa22.96■■□□□ 1.27
NR1H3-233ENST00000531660 RREB1Q92766 1687 aa22.95■■□□□ 1.26
NR1H3-233ENST00000531660 SHANK3Q9BYB0 1731 aa22.94■■□□□ 1.26
NR1H3-233ENST00000531660 PLEKHG2Q9H7P9 1386 aa22.94■■□□□ 1.26
NR1H3-233ENST00000531660 CC2D1BQ5T0F9 858 aaKnown RBP22.93■■□□□ 1.26
NR1H3-233ENST00000531660 PTF1AQ7RTS3 328 aa22.93■■□□□ 1.26
NR1H3-233ENST00000531660 PCDH11XQ9BZA7 1347 aa22.92■■□□□ 1.26
NR1H3-233ENST00000531660 PCDH11YQ9BZA8 1340 aa22.92■■□□□ 1.26
NR1H3-233ENST00000531660 KCNQ2O43526 872 aa22.92■■□□□ 1.26
NR1H3-233ENST00000531660 ACSBG1Q96GR2 724 aa22.92■■□□□ 1.26
NR1H3-233ENST00000531660 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.92■■□□□ 1.26
NR1H3-233ENST00000531660 IGSF1Q8N6C5 1336 aa22.91■■□□□ 1.26
NR1H3-233ENST00000531660 PKD1L3Q7Z443 1732 aa22.9■■□□□ 1.26
NR1H3-233ENST00000531660 NUP188Q5SRE5 1749 aa22.89■■□□□ 1.26
NR1H3-233ENST00000531660 NBPF14Q5TI25 921 aa22.89■■□□□ 1.25
NR1H3-233ENST00000531660 SPG7Q9UQ90 795 aa22.89■■□□□ 1.25
NR1H3-233ENST00000531660 MTHFSP49914 203 aa22.88■■□□□ 1.25
NR1H3-233ENST00000531660 BTAF1O14981 1849 aa22.87■■□□□ 1.25
NR1H3-233ENST00000531660 ZEB1P37275 1124 aaPredicted RBP22.86■■□□□ 1.25
NR1H3-233ENST00000531660 CYP27B1O15528 508 aa22.85■■□□□ 1.25
NR1H3-233ENST00000531660 IL13P35225 146 aa22.85■■□□□ 1.25
NR1H3-233ENST00000531660 PRIM1P49642 420 aaKnown RBP22.85■■□□□ 1.25
NR1H3-233ENST00000531660 DOT1LQ8TEK3 1739 aa22.85■■□□□ 1.25
NR1H3-233ENST00000531660 TXNRD1Q16881 649 aa22.84■■□□□ 1.25
NR1H3-233ENST00000531660 PROM2Q8N271 834 aa22.84■■□□□ 1.25
NR1H3-233ENST00000531660 R3HDM1Q15032 1099 aaKnown RBP22.83■■□□□ 1.25
NR1H3-233ENST00000531660 NKX1-1Q15270 411 aaPredicted RBP22.83■■□□□ 1.25
NR1H3-233ENST00000531660 PSDA5PKW4 1024 aaPredicted RBP22.82■■□□□ 1.24
NR1H3-233ENST00000531660 SYTL4Q96C24 671 aaPredicted RBP22.82■■□□□ 1.24
NR1H3-233ENST00000531660 KDRP35968 1356 aa22.81■■□□□ 1.24
NR1H3-233ENST00000531660 IFNL2Q8IZJ0 200 aa22.8■■□□□ 1.24
NR1H3-233ENST00000531660 SRCAPQ6ZRS2 3230 aa22.8■■□□□ 1.24
NR1H3-233ENST00000531660 DIAPH1O60610 1272 aaKnown RBP22.79■■□□□ 1.24
NR1H3-233ENST00000531660 AMOTQ4VCS5 1084 aa22.79■■□□□ 1.24
NR1H3-233ENST00000531660 PLEKHO1Q53GL0 409 aaPredicted RBP22.79■■□□□ 1.24
NR1H3-233ENST00000531660 CNGB1Q14028 1251 aaPredicted RBP22.78■■□□□ 1.24
NR1H3-233ENST00000531660 SULT6B1Q6IMI4 303 aa22.78■■□□□ 1.24
NR1H3-233ENST00000531660 PHKG2P15735 406 aa22.77■■□□□ 1.24
NR1H3-233ENST00000531660 SLC27A3Q5K4L6 730 aa22.77■■□□□ 1.24
NR1H3-233ENST00000531660 AEBP1Q8IUX7 1158 aa22.76■■□□□ 1.23
NR1H3-233ENST00000531660 HSP90AB1P08238 724 aaKnown RBP22.75■■□□□ 1.23
NR1H3-233ENST00000531660 COL3A1P02461 1466 aaPredicted RBP22.74■■□□□ 1.23
NR1H3-233ENST00000531660 ITGB4P16144 1822 aa22.74■■□□□ 1.23
NR1H3-233ENST00000531660 CFAP53Q96M91 514 aa22.74■■□□□ 1.23
NR1H3-233ENST00000531660 STK32BQ9NY57 414 aa22.74■■□□□ 1.23
NR1H3-233ENST00000531660 HMGB2P26583 209 aaKnown RBP22.73■■□□□ 1.23
NR1H3-233ENST00000531660 ANO8Q9HCE9 1232 aaPredicted RBP22.73■■□□□ 1.23
NR1H3-233ENST00000531660 LY75O60449 1722 aa22.73■■□□□ 1.23
NR1H3-233ENST00000531660 TOGARAM1Q9Y4F4 1720 aa22.73■■□□□ 1.23
NR1H3-233ENST00000531660 LRP5O75197 1615 aa22.72■■□□□ 1.23
NR1H3-233ENST00000531660 PPP2R1AP30153 589 aa22.72■■□□□ 1.23
NR1H3-233ENST00000531660 ZNF530Q6P9A1 599 aaPredicted RBP22.72■■□□□ 1.23
NR1H3-233ENST00000531660 MPRIPQ6WCQ1 1025 aa22.72■■□□□ 1.23
NR1H3-233ENST00000531660 SLC15A2Q16348 729 aa22.71■■□□□ 1.23
NR1H3-233ENST00000531660 SMARCC1Q92922 1105 aaPredicted RBP22.71■■□□□ 1.23
NR1H3-233ENST00000531660 DCAF5Q96JK2 942 aa22.71■■□□□ 1.23
NR1H3-233ENST00000531660 PAPPAQ13219 1627 aa22.71■■□□□ 1.23
NR1H3-233ENST00000531660 LRRC4BQ9NT99 713 aa22.7■■□□□ 1.22
NR1H3-233ENST00000531660 ERVV-2B6SEH9 535 aa22.69■■□□□ 1.22
NR1H3-233ENST00000531660 C1orf141Q5JVX7 400 aa22.69■■□□□ 1.22
NR1H3-233ENST00000531660 PIGBQ92521 554 aa22.69■■□□□ 1.22
NR1H3-233ENST00000531660 TMOD3Q9NYL9 352 aa22.69■■□□□ 1.22
NR1H3-233ENST00000531660 HMOX1P09601 288 aa22.68■■□□□ 1.22
NR1H3-233ENST00000531660 CCNL1Q9UK58 526 aaPredicted RBP22.67■■□□□ 1.22
NR1H3-233ENST00000531660 NUDCQ9Y266 331 aa22.67■■□□□ 1.22
NR1H3-233ENST00000531660 PALLDQ8WX93 1383 aa22.66■■□□□ 1.22
NR1H3-233ENST00000531660 U2SURPO15042 1029 aaKnown RBP22.66■■□□□ 1.22
NR1H3-233ENST00000531660 DDX10Q13206 875 aaKnown RBP22.65■■□□□ 1.22
NR1H3-233ENST00000531660 AKAP4Q5JQC9 854 aa22.64■■□□□ 1.21
NR1H3-233ENST00000531660 AKT1S1Q96B36 256 aa22.64■■□□□ 1.21
NR1H3-233ENST00000531660 CASZ1Q86V15 1759 aa22.63■■□□□ 1.21
NR1H3-233ENST00000531660 KDM6AO15550 1401 aaPredicted RBP22.63■■□□□ 1.21
NR1H3-233ENST00000531660 RALBP1Q15311 655 aa22.62■■□□□ 1.21
NR1H3-233ENST00000531660 SPON1Q9HCB6 807 aa22.62■■□□□ 1.21
NR1H3-233ENST00000531660 ZNF827Q17R98 1081 aa22.61■■□□□ 1.21
NR1H3-233ENST00000531660 QSER1Q2KHR3 1735 aa22.6■■□□□ 1.21
NR1H3-233ENST00000531660 KCNQ4P56696 695 aa22.6■■□□□ 1.21
NR1H3-233ENST00000531660 CABP4P57796 275 aa22.6■■□□□ 1.21
NR1H3-233ENST00000531660 SCN11AQ9UI33 1791 aa22.6■■□□□ 1.21
NR1H3-233ENST00000531660 MTHFSDQ2M296 383 aaKnown RBP22.59■■□□□ 1.21
NR1H3-233ENST00000531660 ASAP1Q9ULH1 1129 aa22.59■■□□□ 1.21
NR1H3-233ENST00000531660 ATG3Q9NT62 314 aa22.58■■□□□ 1.21
NR1H3-233ENST00000531660 TAF1LQ8IZX4 1826 aa22.58■■□□□ 1.21
NR1H3-233ENST00000531660 LOC102724428A0A0B4J2F2 783 aa22.57■■□□□ 1.2
NR1H3-233ENST00000531660 SIK1P57059 783 aa22.57■■□□□ 1.2
NR1H3-233ENST00000531660 GAS2L2Q8NHY3 880 aa22.57■■□□□ 1.2
NR1H3-233ENST00000531660 TFCP2L1Q9NZI6 479 aa22.57■■□□□ 1.2
NR1H3-233ENST00000531660 C5P01031 1676 aa22.57■■□□□ 1.2
NR1H3-233ENST00000531660 FCHSD2O94868 740 aa22.56■■□□□ 1.2
NR1H3-233ENST00000531660 U2AF1L5P0DN76 240 aaPredicted RBP22.56■■□□□ 1.2
NR1H3-233ENST00000531660 U2AF1Q01081 240 aaKnown RBP eCLIP22.56■■□□□ 1.2
NR1H3-233ENST00000531660 PDGFDQ9GZP0 370 aaPredicted RBP22.56■■□□□ 1.2
NR1H3-233ENST00000531660 RSPH6AQ9H0K4 717 aa22.56■■□□□ 1.2
NR1H3-233ENST00000531660 SLC16A10Q8TF71 515 aa22.55■■□□□ 1.2
NR1H3-233ENST00000531660 MTFR1LQ9H019 292 aa22.55■■□□□ 1.2
NR1H3-233ENST00000531660 RNMTO43148 476 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms