RNA–Protein interactions for RNA: ENST00000531257.1

FOXRED1-211, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 3

Gene FOXRED1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-211ENST00000531257 QSER1Q2KHR3 1735 aa15.88■□□□□ 0.13
FOXRED1-211ENST00000531257 NSD3Q9BZ95 1437 aa15.87■□□□□ 0.13
FOXRED1-211ENST00000531257 NBPF6Q5VWK0 638 aa15.87■□□□□ 0.13
FOXRED1-211ENST00000531257 ZCRB1Q8TBF4 217 aaKnown RBP15.87■□□□□ 0.13
FOXRED1-211ENST00000531257 NBPF4Q96M43 638 aa15.87■□□□□ 0.13
FOXRED1-211ENST00000531257 TIMELESSQ9UNS1 1208 aa15.86■□□□□ 0.13
FOXRED1-211ENST00000531257 ANKRD26Q9UPS8 1709 aa15.85■□□□□ 0.13
FOXRED1-211ENST00000531257 PRIM1P49642 420 aaKnown RBP15.85■□□□□ 0.13
FOXRED1-211ENST00000531257 HSP90AB2PQ58FF8 381 aa15.85■□□□□ 0.13
FOXRED1-211ENST00000531257 RAPGEF4Q8WZA2 1011 aa15.85■□□□□ 0.13
FOXRED1-211ENST00000531257 CARD14Q9BXL6 1004 aa15.85■□□□□ 0.13
FOXRED1-211ENST00000531257 MTFR1LQ9H019 292 aa15.85■□□□□ 0.13
FOXRED1-211ENST00000531257 LRRC4BQ9NT99 713 aa15.85■□□□□ 0.13
FOXRED1-211ENST00000531257 FLT4P35916 1363 aa15.85■□□□□ 0.13
FOXRED1-211ENST00000531257 ITGB4P16144 1822 aa15.84■□□□□ 0.13
FOXRED1-211ENST00000531257 PPM1GO15355 546 aaPredicted RBP15.84■□□□□ 0.13
FOXRED1-211ENST00000531257 PTGER2P43116 358 aa15.84■□□□□ 0.13
FOXRED1-211ENST00000531257 ZNF827Q17R98 1081 aa15.84■□□□□ 0.13
FOXRED1-211ENST00000531257 INSRP06213 1382 aa15.84■□□□□ 0.13
FOXRED1-211ENST00000531257 TATP17735 454 aaPredicted RBP15.83■□□□□ 0.12
FOXRED1-211ENST00000531257 KCNQ4P56696 695 aa15.83■□□□□ 0.12
FOXRED1-211ENST00000531257 CLSPNQ9HAW4 1339 aa15.83■□□□□ 0.12
FOXRED1-211ENST00000531257 YY1P25490 414 aa15.82■□□□□ 0.12
FOXRED1-211ENST00000531257 SLC27A3Q5K4L6 730 aa15.82■□□□□ 0.12
FOXRED1-211ENST00000531257 EMILIN1Q9Y6C2 1016 aa15.82■□□□□ 0.12
FOXRED1-211ENST00000531257 NSD2O96028 1365 aa15.81■□□□□ 0.12
FOXRED1-211ENST00000531257 C5P01031 1676 aa15.81■□□□□ 0.12
FOXRED1-211ENST00000531257 CGNL1Q0VF96 1302 aa15.81■□□□□ 0.12
FOXRED1-211ENST00000531257 KIF24Q5T7B8 1368 aa15.81■□□□□ 0.12
FOXRED1-211ENST00000531257 PKD1L3Q7Z443 1732 aa15.81■□□□□ 0.12
FOXRED1-211ENST00000531257 TAF1LQ8IZX4 1826 aa15.8■□□□□ 0.12
FOXRED1-211ENST00000531257 TOGARAM1Q9Y4F4 1720 aa15.8■□□□□ 0.12
FOXRED1-211ENST00000531257 FHDC1Q9C0D6 1143 aaPredicted RBP15.8■□□□□ 0.12
FOXRED1-211ENST00000531257 PCDH11XQ9BZA7 1347 aa15.79■□□□□ 0.12
FOXRED1-211ENST00000531257 PCDH11YQ9BZA8 1340 aa15.79■□□□□ 0.12
FOXRED1-211ENST00000531257 AKT1S1Q96B36 256 aa15.79■□□□□ 0.12
FOXRED1-211ENST00000531257 TFCP2L1Q9NZI6 479 aa15.79■□□□□ 0.12
FOXRED1-211ENST00000531257 COL24A1Q17RW2 1714 aa15.78■□□□□ 0.12
FOXRED1-211ENST00000531257 CCER1Q8TC90 406 aaPredicted RBP15.78■□□□□ 0.12
FOXRED1-211ENST00000531257 ARXQ96QS3 562 aa15.78■□□□□ 0.12
FOXRED1-211ENST00000531257 CCNL1Q9UK58 526 aaPredicted RBP15.78■□□□□ 0.12
FOXRED1-211ENST00000531257 CHD4Q14839 1912 aa15.78■□□□□ 0.12
FOXRED1-211ENST00000531257 KLHL34Q8N239 644 aa15.77■□□□□ 0.12
FOXRED1-211ENST00000531257 SGIP1Q9BQI5 828 aa15.77■□□□□ 0.12
FOXRED1-211ENST00000531257 SYT17Q9BSW7 474 aa15.77■□□□□ 0.12
FOXRED1-211ENST00000531257 PNPLA7Q6ZV29 1317 aa15.76■□□□□ 0.11
FOXRED1-211ENST00000531257 TNNT2P45379 298 aaPredicted RBP15.76■□□□□ 0.11
FOXRED1-211ENST00000531257 EIF4G2P78344 907 aaKnown RBP eCLIP15.76■□□□□ 0.11
FOXRED1-211ENST00000531257 MSH5O43196 834 aa15.75■□□□□ 0.11
FOXRED1-211ENST00000531257 MPRIPQ6WCQ1 1025 aa15.75■□□□□ 0.11
FOXRED1-211ENST00000531257 HSPA5P11021 654 aaKnown RBP15.74■□□□□ 0.11
FOXRED1-211ENST00000531257 POLD1P28340 1107 aa15.74■□□□□ 0.11
FOXRED1-211ENST00000531257 WASHC2AQ641Q2 1341 aa15.73■□□□□ 0.11
FOXRED1-211ENST00000531257 CYP27B1O15528 508 aa15.73■□□□□ 0.11
FOXRED1-211ENST00000531257 SLC16A10Q8TF71 515 aa15.73■□□□□ 0.11
FOXRED1-211ENST00000531257 UTRNP46939 3433 aa15.72■□□□□ 0.11
FOXRED1-211ENST00000531257 POLKQ9UBT6 870 aa15.72■□□□□ 0.11
FOXRED1-211ENST00000531257 SPG7Q9UQ90 795 aa15.72■□□□□ 0.11
FOXRED1-211ENST00000531257 PALLDQ8WX93 1383 aa15.72■□□□□ 0.11
FOXRED1-211ENST00000531257 C4BP0C0L5 1744 aa15.71■□□□□ 0.11
FOXRED1-211ENST00000531257 EYA1Q99502 592 aa15.71■□□□□ 0.11
FOXRED1-211ENST00000531257 PANK3Q9H999 370 aa15.71■□□□□ 0.11
FOXRED1-211ENST00000531257 NCAPD2Q15021 1401 aa15.7■□□□□ 0.1
FOXRED1-211ENST00000531257 UBR3Q6ZT12 1888 aa15.69■□□□□ 0.1
FOXRED1-211ENST00000531257 COL23A1Q86Y22 540 aaPredicted RBP15.69■□□□□ 0.1
FOXRED1-211ENST00000531257 MAP3K5Q99683 1374 aa15.68■□□□□ 0.1
FOXRED1-211ENST00000531257 EIF4A2Q14240 407 aaKnown RBP15.68■□□□□ 0.1
FOXRED1-211ENST00000531257 PELP1Q8IZL8 1130 aaKnown RBP15.68■□□□□ 0.1
FOXRED1-211ENST00000531257 GPR162Q16538 588 aa15.67■□□□□ 0.1
FOXRED1-211ENST00000531257 MSL1Q68DK7 614 aa15.67■□□□□ 0.1
FOXRED1-211ENST00000531257 PIGBQ92521 554 aa15.67■□□□□ 0.1
FOXRED1-211ENST00000531257 SMARCC1Q92922 1105 aaPredicted RBP15.67■□□□□ 0.1
FOXRED1-211ENST00000531257 TMOD3Q9NYL9 352 aa15.66■□□□□ 0.1
FOXRED1-211ENST00000531257 HMGB2P26583 209 aaKnown RBP15.65■□□□□ 0.1
FOXRED1-211ENST00000531257 NKX1-1Q15270 411 aaPredicted RBP15.65■□□□□ 0.1
FOXRED1-211ENST00000531257 IFNL2Q8IZJ0 200 aa15.65■□□□□ 0.1
FOXRED1-211ENST00000531257 AK7Q96M32 723 aa15.65■□□□□ 0.1
FOXRED1-211ENST00000531257 GOLGB1Q14789 3259 aaKnown RBP15.64■□□□□ 0.09
FOXRED1-211ENST00000531257 PHF14O94880 888 aa15.64■□□□□ 0.09
FOXRED1-211ENST00000531257 PHKG2P15735 406 aa15.64■□□□□ 0.09
FOXRED1-211ENST00000531257 MORC1Q86VD1 984 aa15.64■□□□□ 0.09
FOXRED1-211ENST00000531257 NLGN2Q8NFZ4 835 aa15.64■□□□□ 0.09
FOXRED1-211ENST00000531257 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.64■□□□□ 0.09
FOXRED1-211ENST00000531257 VIRMAQ69YN4 1812 aaKnown RBP15.64■□□□□ 0.09
FOXRED1-211ENST00000531257 FLAD1Q8NFF5 587 aa15.62■□□□□ 0.09
FOXRED1-211ENST00000531257 KNSTRNQ9Y448 316 aa15.62■□□□□ 0.09
FOXRED1-211ENST00000531257 IGSF1Q8N6C5 1336 aa15.62■□□□□ 0.09
FOXRED1-211ENST00000531257 LOC102724428A0A0B4J2F2 783 aa15.61■□□□□ 0.09
FOXRED1-211ENST00000531257 SIK1P57059 783 aa15.61■□□□□ 0.09
FOXRED1-211ENST00000531257 SMIM5Q71RC9 77 aa15.61■□□□□ 0.09
FOXRED1-211ENST00000531257 ZNF784Q8NCA9 323 aaPredicted RBP15.61■□□□□ 0.09
FOXRED1-211ENST00000531257 ASAP1Q9ULH1 1129 aa15.61■□□□□ 0.09
FOXRED1-211ENST00000531257 ATP6V1AP38606 617 aa15.6■□□□□ 0.09
FOXRED1-211ENST00000531257 AMIGO3Q86WK7 504 aa15.6■□□□□ 0.09
FOXRED1-211ENST00000531257 LINC00116Q8NCU8 138 aa15.6■□□□□ 0.09
FOXRED1-211ENST00000531257 COL5A3P25940 1745 aaPredicted RBP15.6■□□□□ 0.09
FOXRED1-211ENST00000531257 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.59■□□□□ 0.09
FOXRED1-211ENST00000531257 PLEKHO1Q53GL0 409 aaPredicted RBP15.59■□□□□ 0.09
FOXRED1-211ENST00000531257 SCN11AQ9UI33 1791 aa15.58■□□□□ 0.08
FOXRED1-211ENST00000531257 ZNF530Q6P9A1 599 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms