RNA–Protein interactions for RNA: ENST00000531146.1

VPS51-210, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 594 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-210ENST00000531146 NBPF4Q96M43 638 aa16.75■□□□□ 0.27
VPS51-210ENST00000531146 RTL1A6NKG5 1358 aa16.75■□□□□ 0.27
VPS51-210ENST00000531146 PRIM1P49642 420 aaKnown RBP16.74■□□□□ 0.27
VPS51-210ENST00000531146 USHBP1Q8N6Y0 703 aa16.74■□□□□ 0.27
VPS51-210ENST00000531146 NSD2O96028 1365 aa16.74■□□□□ 0.27
VPS51-210ENST00000531146 DOT1LQ8TEK3 1739 aa16.73■□□□□ 0.27
VPS51-210ENST00000531146 KCNQ4P56696 695 aa16.73■□□□□ 0.27
VPS51-210ENST00000531146 ZCRB1Q8TBF4 217 aaKnown RBP16.73■□□□□ 0.27
VPS51-210ENST00000531146 AKT1S1Q96B36 256 aa16.73■□□□□ 0.27
VPS51-210ENST00000531146 SYTL4Q96C24 671 aaPredicted RBP16.73■□□□□ 0.27
VPS51-210ENST00000531146 FHDC1Q9C0D6 1143 aaPredicted RBP16.73■□□□□ 0.27
VPS51-210ENST00000531146 DCAF8L1A6NGE4 600 aa16.72■□□□□ 0.27
VPS51-210ENST00000531146 SYT17Q9BSW7 474 aa16.72■□□□□ 0.27
VPS51-210ENST00000531146 CARD14Q9BXL6 1004 aa16.72■□□□□ 0.27
VPS51-210ENST00000531146 KIF20BQ96Q89 1820 aa16.72■□□□□ 0.27
VPS51-210ENST00000531146 HSP90AB2PQ58FF8 381 aa16.71■□□□□ 0.27
VPS51-210ENST00000531146 SLC27A3Q5K4L6 730 aa16.7■□□□□ 0.26
VPS51-210ENST00000531146 INSRP06213 1382 aa16.69■□□□□ 0.26
VPS51-210ENST00000531146 CDCA8Q53HL2 280 aa16.69■□□□□ 0.26
VPS51-210ENST00000531146 LY75O60449 1722 aa16.69■□□□□ 0.26
VPS51-210ENST00000531146 PNPLA7Q6ZV29 1317 aa16.69■□□□□ 0.26
VPS51-210ENST00000531146 TUBGCP6Q96RT7 1819 aa16.68■□□□□ 0.26
VPS51-210ENST00000531146 ARXQ96QS3 562 aa16.68■□□□□ 0.26
VPS51-210ENST00000531146 SMG6Q86US8 1419 aaKnown RBP16.68■□□□□ 0.26
VPS51-210ENST00000531146 NSD3Q9BZ95 1437 aa16.68■□□□□ 0.26
VPS51-210ENST00000531146 QSER1Q2KHR3 1735 aa16.67■□□□□ 0.26
VPS51-210ENST00000531146 FLT4P35916 1363 aa16.67■□□□□ 0.26
VPS51-210ENST00000531146 RAPGEF4Q8WZA2 1011 aa16.67■□□□□ 0.26
VPS51-210ENST00000531146 CGNL1Q0VF96 1302 aa16.67■□□□□ 0.26
VPS51-210ENST00000531146 EMILIN1Q9Y6C2 1016 aa16.66■□□□□ 0.26
VPS51-210ENST00000531146 TATP17735 454 aaPredicted RBP16.65■□□□□ 0.26
VPS51-210ENST00000531146 TFCP2L1Q9NZI6 479 aa16.65■□□□□ 0.26
VPS51-210ENST00000531146 KIF24Q5T7B8 1368 aa16.64■□□□□ 0.26
VPS51-210ENST00000531146 MAP3K5Q99683 1374 aa16.64■□□□□ 0.26
VPS51-210ENST00000531146 SLC16A10Q8TF71 515 aa16.64■□□□□ 0.25
VPS51-210ENST00000531146 CCNL1Q9UK58 526 aaPredicted RBP16.64■□□□□ 0.25
VPS51-210ENST00000531146 COL24A1Q17RW2 1714 aa16.64■□□□□ 0.25
VPS51-210ENST00000531146 GOLGB1Q14789 3259 aaKnown RBP16.64■□□□□ 0.25
VPS51-210ENST00000531146 CYP27B1O15528 508 aa16.62■□□□□ 0.25
VPS51-210ENST00000531146 PCDH11XQ9BZA7 1347 aa16.62■□□□□ 0.25
VPS51-210ENST00000531146 PCDH11YQ9BZA8 1340 aa16.62■□□□□ 0.25
VPS51-210ENST00000531146 ANKRD26Q9UPS8 1709 aa16.61■□□□□ 0.25
VPS51-210ENST00000531146 NCAPD2Q15021 1401 aa16.61■□□□□ 0.25
VPS51-210ENST00000531146 TOGARAM1Q9Y4F4 1720 aa16.6■□□□□ 0.25
VPS51-210ENST00000531146 PPM1GO15355 546 aaPredicted RBP16.6■□□□□ 0.25
VPS51-210ENST00000531146 PKD1L3Q7Z443 1732 aa16.59■□□□□ 0.25
VPS51-210ENST00000531146 MAP2P11137 1827 aaKnown RBP16.59■□□□□ 0.25
VPS51-210ENST00000531146 POLD1P28340 1107 aa16.59■□□□□ 0.25
VPS51-210ENST00000531146 MPRIPQ6WCQ1 1025 aa16.59■□□□□ 0.25
VPS51-210ENST00000531146 COL23A1Q86Y22 540 aaPredicted RBP16.59■□□□□ 0.25
VPS51-210ENST00000531146 KLHL34Q8N239 644 aa16.59■□□□□ 0.25
VPS51-210ENST00000531146 CHD4Q14839 1912 aa16.58■□□□□ 0.25
VPS51-210ENST00000531146 ZNF784Q8NCA9 323 aaPredicted RBP16.58■□□□□ 0.24
VPS51-210ENST00000531146 WASHC2AQ641Q2 1341 aa16.58■□□□□ 0.24
VPS51-210ENST00000531146 PALLDQ8WX93 1383 aa16.58■□□□□ 0.24
VPS51-210ENST00000531146 C5P01031 1676 aa16.58■□□□□ 0.24
VPS51-210ENST00000531146 ITGB4P16144 1822 aa16.58■□□□□ 0.24
VPS51-210ENST00000531146 EYA1Q99502 592 aa16.57■□□□□ 0.24
VPS51-210ENST00000531146 POLR3GLQ9BT43 218 aa16.57■□□□□ 0.24
VPS51-210ENST00000531146 POLKQ9UBT6 870 aa16.57■□□□□ 0.24
VPS51-210ENST00000531146 TAF1LQ8IZX4 1826 aa16.56■□□□□ 0.24
VPS51-210ENST00000531146 MSH5O43196 834 aa16.56■□□□□ 0.24
VPS51-210ENST00000531146 NLGN2Q8NFZ4 835 aa16.56■□□□□ 0.24
VPS51-210ENST00000531146 GPR162Q16538 588 aa16.55■□□□□ 0.24
VPS51-210ENST00000531146 TNNT2P45379 298 aaPredicted RBP16.54■□□□□ 0.24
VPS51-210ENST00000531146 NKX1-1Q15270 411 aaPredicted RBP16.54■□□□□ 0.24
VPS51-210ENST00000531146 MSL1Q68DK7 614 aa16.54■□□□□ 0.24
VPS51-210ENST00000531146 AMIGO3Q86WK7 504 aa16.54■□□□□ 0.24
VPS51-210ENST00000531146 PIGBQ92521 554 aa16.54■□□□□ 0.24
VPS51-210ENST00000531146 SPG7Q9UQ90 795 aa16.53■□□□□ 0.24
VPS51-210ENST00000531146 HSPA5P11021 654 aaKnown RBP16.52■□□□□ 0.24
VPS51-210ENST00000531146 EIF4A2Q14240 407 aaKnown RBP16.52■□□□□ 0.24
VPS51-210ENST00000531146 C4BP0C0L5 1744 aa16.51■□□□□ 0.23
VPS51-210ENST00000531146 SMIM5Q71RC9 77 aa16.51■□□□□ 0.23
VPS51-210ENST00000531146 PELP1Q8IZL8 1130 aaKnown RBP16.51■□□□□ 0.23
VPS51-210ENST00000531146 SMARCC1Q92922 1105 aaPredicted RBP16.51■□□□□ 0.23
VPS51-210ENST00000531146 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.51■□□□□ 0.23
VPS51-210ENST00000531146 EIF4G2P78344 907 aaKnown RBP eCLIP16.5■□□□□ 0.23
VPS51-210ENST00000531146 PHKG2P15735 406 aa16.49■□□□□ 0.23
VPS51-210ENST00000531146 UBR3Q6ZT12 1888 aa16.49■□□□□ 0.23
VPS51-210ENST00000531146 PANK3Q9H999 370 aa16.49■□□□□ 0.23
VPS51-210ENST00000531146 ASAP1Q9ULH1 1129 aa16.49■□□□□ 0.23
VPS51-210ENST00000531146 LOC102724428A0A0B4J2F2 783 aa16.48■□□□□ 0.23
VPS51-210ENST00000531146 YBX3P16989 372 aaKnown RBP eCLIP16.48■□□□□ 0.23
VPS51-210ENST00000531146 SIK1P57059 783 aa16.48■□□□□ 0.23
VPS51-210ENST00000531146 IFNL2Q8IZJ0 200 aa16.48■□□□□ 0.23
VPS51-210ENST00000531146 LINC00116Q8NCU8 138 aa16.48■□□□□ 0.23
VPS51-210ENST00000531146 FLAD1Q8NFF5 587 aa16.48■□□□□ 0.23
VPS51-210ENST00000531146 AK7Q96M32 723 aa16.48■□□□□ 0.23
VPS51-210ENST00000531146 PHF14O94880 888 aa16.47■□□□□ 0.23
VPS51-210ENST00000531146 TMOD3Q9NYL9 352 aa16.47■□□□□ 0.23
VPS51-210ENST00000531146 IGSF1Q8N6C5 1336 aa16.46■□□□□ 0.23
VPS51-210ENST00000531146 ZNF316A6NFI3 1004 aaPredicted RBP16.46■□□□□ 0.23
VPS51-210ENST00000531146 ITPK1Q13572 414 aa16.46■□□□□ 0.23
VPS51-210ENST00000531146 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.45■□□□□ 0.22
VPS51-210ENST00000531146 HMGB2P26583 209 aaKnown RBP16.45■□□□□ 0.22
VPS51-210ENST00000531146 ATG3Q9NT62 314 aa16.45■□□□□ 0.22
VPS51-210ENST00000531146 CD2APQ9Y5K6 639 aa16.44■□□□□ 0.22
VPS51-210ENST00000531146 ATP6V1AP38606 617 aa16.43■□□□□ 0.22
VPS51-210ENST00000531146 PLEKHG2Q9H7P9 1386 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms