RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 TPM3P06753 285 aa9.37□□□□□ -0.91
PTPRK-219ENST00000531050 DRC1Q96MC2 740 aa9.37□□□□□ -0.91
PTPRK-219ENST00000531050 UHRF1BP1LA0JNW5 1464 aa9.36□□□□□ -0.91
PTPRK-219ENST00000531050 TRPM1Q7Z4N2 1603 aa9.36□□□□□ -0.91
PTPRK-219ENST00000531050 SLFNL1Q499Z3 407 aa9.36□□□□□ -0.91
PTPRK-219ENST00000531050 BMP2KLQ5H9B9 411 aa9.36□□□□□ -0.91
PTPRK-219ENST00000531050 KRBA2Q6ZNG9 492 aa9.36□□□□□ -0.91
PTPRK-219ENST00000531050 PAXBP1Q9Y5B6 917 aa9.36□□□□□ -0.91
PTPRK-219ENST00000531050 DNAJC21Q5F1R6 531 aaKnown RBP9.36□□□□□ -0.91
PTPRK-219ENST00000531050 TBC1D9Q6ZT07 1266 aa9.36□□□□□ -0.91
PTPRK-219ENST00000531050 FAM43BQ6ZT52 329 aaPredicted RBP9.36□□□□□ -0.91
PTPRK-219ENST00000531050 TXLNBQ8N3L3 684 aa9.36□□□□□ -0.91
PTPRK-219ENST00000531050 SYAP1Q96A49 352 aaPredicted RBP9.36□□□□□ -0.91
PTPRK-219ENST00000531050 C16orf45Q96MC5 204 aaPredicted RBP9.36□□□□□ -0.91
PTPRK-219ENST00000531050 IQGAP3Q86VI3 1631 aa9.35□□□□□ -0.91
PTPRK-219ENST00000531050 ERBB3P21860 1342 aa9.35□□□□□ -0.91
PTPRK-219ENST00000531050 TULP1O00294 542 aaPredicted RBP9.35□□□□□ -0.91
PTPRK-219ENST00000531050 IRF6O14896 467 aa9.35□□□□□ -0.91
PTPRK-219ENST00000531050 SART3Q15020 963 aaKnown RBP9.35□□□□□ -0.91
PTPRK-219ENST00000531050 RABEP1Q15276 862 aa9.35□□□□□ -0.91
PTPRK-219ENST00000531050 GTF3C6Q969F1 213 aa9.35□□□□□ -0.91
PTPRK-219ENST00000531050 BCL2L13Q9BXK5 485 aa9.35□□□□□ -0.91
PTPRK-219ENST00000531050 PTPRCP08575 1304 aa9.35□□□□□ -0.91
PTPRK-219ENST00000531050 TNNT1P13805 278 aa9.35□□□□□ -0.91
PTPRK-219ENST00000531050 HCLS1P14317 486 aaPredicted RBP9.35□□□□□ -0.91
PTPRK-219ENST00000531050 ATP2B1P20020 1258 aa9.35□□□□□ -0.91
PTPRK-219ENST00000531050 BMS1Q14692 1282 aaKnown RBP9.35□□□□□ -0.91
PTPRK-219ENST00000531050 NBPF20Q3BBV1 942 aa9.35□□□□□ -0.91
PTPRK-219ENST00000531050 CXorf56Q9H5V9 222 aa9.35□□□□□ -0.91
PTPRK-219ENST00000531050 ZNF215Q9UL58 517 aaPredicted RBP9.35□□□□□ -0.91
PTPRK-219ENST00000531050 FHOD1Q9Y613 1164 aa9.35□□□□□ -0.91
PTPRK-219ENST00000531050 NUCB1Q02818 461 aa9.34□□□□□ -0.91
PTPRK-219ENST00000531050 HSP90AB3PQ58FF7 597 aa9.34□□□□□ -0.91
PTPRK-219ENST00000531050 SRLQ86TD4 932 aa9.34□□□□□ -0.91
PTPRK-219ENST00000531050 PACS2Q86VP3 889 aa9.34□□□□□ -0.91
PTPRK-219ENST00000531050 CCDC191Q8NCU4 936 aa9.34□□□□□ -0.91
PTPRK-219ENST00000531050 TESK2Q96S53 571 aa9.34□□□□□ -0.91
PTPRK-219ENST00000531050 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.34□□□□□ -0.911e-8■■■□□ 16
PTPRK-219ENST00000531050 KDM2AQ9Y2K7 1162 aa9.34□□□□□ -0.91
PTPRK-219ENST00000531050 V9GYY5 206 aaPredicted RBP9.34□□□□□ -0.91
PTPRK-219ENST00000531050 PIK3C2GO75747 1445 aa9.34□□□□□ -0.91
PTPRK-219ENST00000531050 A0A1B0GUL7 405 aa9.34□□□□□ -0.91
PTPRK-219ENST00000531050 PLA2G4AP47712 749 aa9.34□□□□□ -0.91
PTPRK-219ENST00000531050 GSCP56915 257 aaPredicted RBP9.34□□□□□ -0.91
PTPRK-219ENST00000531050 RTF1Q92541 710 aaKnown RBP9.34□□□□□ -0.91
PTPRK-219ENST00000531050 CCDC189A1A4V9 331 aa9.33□□□□□ -0.92
PTPRK-219ENST00000531050 ELF2Q15723 593 aa9.33□□□□□ -0.92
PTPRK-219ENST00000531050 FOXD4L5Q5VV16 416 aaPredicted RBP9.33□□□□□ -0.92
PTPRK-219ENST00000531050 SPC24Q8NBT2 197 aa9.33□□□□□ -0.92
PTPRK-219ENST00000531050 FOXD4L4Q8WXT5 416 aaPredicted RBP9.33□□□□□ -0.92
PTPRK-219ENST00000531050 LRRFIP2Q9Y608 721 aaKnown RBP9.33□□□□□ -0.92
PTPRK-219ENST00000531050 ZCCHC11Q5TAX3 1644 aaKnown RBP9.33□□□□□ -0.92
PTPRK-219ENST00000531050 CFAP74Q9C0B2 1584 aa9.33□□□□□ -0.92
PTPRK-219ENST00000531050 PLEKHG2Q9H7P9 1386 aa9.33□□□□□ -0.92
PTPRK-219ENST00000531050 GADD45BO75293 160 aaPredicted RBP9.33□□□□□ -0.92
PTPRK-219ENST00000531050 PTGS1P23219 599 aa9.33□□□□□ -0.92
PTPRK-219ENST00000531050 ZSCAN26Q16670 478 aa9.33□□□□□ -0.92
PTPRK-219ENST00000531050 LNPKQ9C0E8 428 aa9.33□□□□□ -0.92
PTPRK-219ENST00000531050 STK26Q9P289 416 aa9.33□□□□□ -0.92
PTPRK-219ENST00000531050 SUFUQ9UMX1 484 aa9.33□□□□□ -0.92
PTPRK-219ENST00000531050 RRP15Q9Y3B9 282 aaKnown RBP9.33□□□□□ -0.92
PTPRK-219ENST00000531050 PRAG1Q86YV5 1406 aa9.33□□□□□ -0.92
PTPRK-219ENST00000531050 PLA2R1Q13018 1463 aa9.32□□□□□ -0.92
PTPRK-219ENST00000531050 MAGI2Q86UL8 1455 aa9.32□□□□□ -0.92
PTPRK-219ENST00000531050 LAMC1P11047 1609 aa9.32□□□□□ -0.92
PTPRK-219ENST00000531050 KIF1CO43896 1103 aaKnown RBP9.32□□□□□ -0.92
PTPRK-219ENST00000531050 MCCP23508 829 aa9.32□□□□□ -0.92
PTPRK-219ENST00000531050 ST5P78524 1137 aa9.32□□□□□ -0.92
PTPRK-219ENST00000531050 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.32□□□□□ -0.92
PTPRK-219ENST00000531050 RNF217Q8TC41 542 aa9.32□□□□□ -0.92
PTPRK-219ENST00000531050 SMARCE1Q969G3 411 aa9.32□□□□□ -0.92
PTPRK-219ENST00000531050 H2AFXP16104 143 aaPredicted RBP9.32□□□□□ -0.92
PTPRK-219ENST00000531050 TTC31Q49AM3 519 aaPredicted RBP9.32□□□□□ -0.92
PTPRK-219ENST00000531050 MED4Q9NPJ6 270 aa9.32□□□□□ -0.92
PTPRK-219ENST00000531050 YEATS2Q9ULM3 1422 aa9.32□□□□□ -0.92
PTPRK-219ENST00000531050 DUOX2Q9NRD8 1548 aa9.31□□□□□ -0.92
PTPRK-219ENST00000531050 SMARCA5O60264 1052 aaPredicted RBP9.31□□□□□ -0.92
PTPRK-219ENST00000531050 GOLGA6L1Q8N7Z2 621 aa9.31□□□□□ -0.92
PTPRK-219ENST00000531050 ERO1AQ96HE7 468 aa9.31□□□□□ -0.92
PTPRK-219ENST00000531050 SGSM3Q96HU1 749 aa9.31□□□□□ -0.92
PTPRK-219ENST00000531050 EXOC6BQ9Y2D4 811 aa9.31□□□□□ -0.92
PTPRK-219ENST00000531050 A2MP01023 1474 aa9.31□□□□□ -0.92
PTPRK-219ENST00000531050 GOLIM4O00461 696 aa9.31□□□□□ -0.92
PTPRK-219ENST00000531050 PNMA6AP0CW24 399 aaPredicted RBP9.31□□□□□ -0.92
PTPRK-219ENST00000531050 LRMPQ12912 555 aa9.31□□□□□ -0.92
PTPRK-219ENST00000531050 CHD1LQ86WJ1 897 aa9.31□□□□□ -0.92
PTPRK-219ENST00000531050 DZIP1LQ8IYY4 767 aaKnown RBP9.31□□□□□ -0.92
PTPRK-219ENST00000531050 USP26Q9BXU7 913 aa9.31□□□□□ -0.92
PTPRK-219ENST00000531050 ABCC1P33527 1531 aa9.3□□□□□ -0.92
PTPRK-219ENST00000531050 ERBINQ96RT1 1412 aa9.3□□□□□ -0.92
PTPRK-219ENST00000531050 SCAF11Q99590 1463 aaKnown RBP9.3□□□□□ -0.92
PTPRK-219ENST00000531050 BRD1O95696 1058 aa9.3□□□□□ -0.92
PTPRK-219ENST00000531050 PLCB2Q00722 1185 aa9.3□□□□□ -0.92
PTPRK-219ENST00000531050 E2F4Q16254 413 aa9.3□□□□□ -0.92
PTPRK-219ENST00000531050 TEX35Q5T0J7 233 aa9.3□□□□□ -0.92
PTPRK-219ENST00000531050 SWT1Q5T5J6 900 aaKnown RBP9.3□□□□□ -0.92
PTPRK-219ENST00000531050 CCDC91Q7Z6B0 441 aa9.3□□□□□ -0.92
PTPRK-219ENST00000531050 IFT57Q9NWB7 429 aa9.3□□□□□ -0.92
PTPRK-219ENST00000531050 CFAP65Q6ZU64 1925 aaKnown RBP9.3□□□□□ -0.92
PTPRK-219ENST00000531050 EIF2AK4Q9P2K8 1649 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms