RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 EDC4Q6P2E9 1401 aaKnown RBP17.49■□□□□ 0.39
USP48-213ENST00000529637 ATP7BP35670 1465 aa17.49■□□□□ 0.39
USP48-213ENST00000529637 ZBTB7CA1YPR0 619 aa17.49■□□□□ 0.39
USP48-213ENST00000529637 CLEC17AQ6ZS10 378 aa17.49■□□□□ 0.39
USP48-213ENST00000529637 LMBRD1Q9NUN5 540 aa17.49■□□□□ 0.39
USP48-213ENST00000529637 PPP6R1Q9UPN7 881 aa17.49■□□□□ 0.39
USP48-213ENST00000529637 ZNF445P59923 1031 aa17.48■□□□□ 0.39
USP48-213ENST00000529637 KRT24Q2M2I5 525 aa17.48■□□□□ 0.39
USP48-213ENST00000529637 CFAP44Q96MT7 982 aa17.48■□□□□ 0.39
USP48-213ENST00000529637 IBTKQ9P2D0 1353 aaPredicted RBP17.48■□□□□ 0.39
USP48-213ENST00000529637 PRDM10Q9NQV6 1147 aa17.47■□□□□ 0.39
USP48-213ENST00000529637 MAP2P11137 1827 aaKnown RBP17.47■□□□□ 0.39
USP48-213ENST00000529637 CLTCQ00610 1675 aaKnown RBP17.47■□□□□ 0.39
USP48-213ENST00000529637 ZNF500O60304 480 aaPredicted RBP17.47■□□□□ 0.39
USP48-213ENST00000529637 TERF1P54274 439 aa17.47■□□□□ 0.39
USP48-213ENST00000529637 MCM10Q7L590 875 aa17.47■□□□□ 0.39
USP48-213ENST00000529637 PDLIM2Q96JY6 352 aa17.47■□□□□ 0.39
USP48-213ENST00000529637 API5Q9BZZ5 524 aaKnown RBP17.47■□□□□ 0.39
USP48-213ENST00000529637 ANKRD26Q9UPS8 1709 aa17.46■□□□□ 0.39
USP48-213ENST00000529637 JARID2Q92833 1246 aaPredicted RBP17.46■□□□□ 0.39
USP48-213ENST00000529637 KIF20BQ96Q89 1820 aa17.46■□□□□ 0.39
USP48-213ENST00000529637 GCC1Q96CN9 775 aa17.46■□□□□ 0.39
USP48-213ENST00000529637 PODXL2Q9NZ53 605 aa17.45■□□□□ 0.38
USP48-213ENST00000529637 PRPF40AO75400 957 aaKnown RBP17.45■□□□□ 0.38
USP48-213ENST00000529637 GPT2Q8TD30 523 aa17.45■□□□□ 0.38
USP48-213ENST00000529637 SLC26A8Q96RN1 970 aa17.45■□□□□ 0.38
USP48-213ENST00000529637 NSFL1CQ9UNZ2 370 aaKnown RBP17.45■□□□□ 0.38
USP48-213ENST00000529637 ARHGAP45Q92619 1136 aa17.44■□□□□ 0.38
USP48-213ENST00000529637 EIF4A2Q14240 407 aaKnown RBP17.43■□□□□ 0.38
USP48-213ENST00000529637 SIRT2Q8IXJ6 389 aa17.43■□□□□ 0.38
USP48-213ENST00000529637 PRR36Q9H6K5 1346 aa17.43■□□□□ 0.38
USP48-213ENST00000529637 PLEKHG5O94827 1062 aa17.43■□□□□ 0.38
USP48-213ENST00000529637 ZGPATQ8N5A5 531 aaKnown RBP17.43■□□□□ 0.38
USP48-213ENST00000529637 HSP90AB2PQ58FF8 381 aa17.43■□□□□ 0.38
USP48-213ENST00000529637 MIS18AQ9NYP9 233 aa17.43■□□□□ 0.38
USP48-213ENST00000529637 ZKSCAN5Q9Y2L8 839 aa17.43■□□□□ 0.38
USP48-213ENST00000529637 ZNF853P0CG23 659 aa17.42■□□□□ 0.38
USP48-213ENST00000529637 CPSF1Q10570 1443 aaKnown RBP17.42■□□□□ 0.38
USP48-213ENST00000529637 ACEP12821 1306 aa17.42■□□□□ 0.38
USP48-213ENST00000529637 HS1BP3Q53T59 392 aa17.42■□□□□ 0.38
USP48-213ENST00000529637 CYP2E1P05181 493 aaPredicted RBP17.42■□□□□ 0.38
USP48-213ENST00000529637 GSPT1P15170 499 aaKnown RBP17.42■□□□□ 0.38
USP48-213ENST00000529637 FOXD4L5Q5VV16 416 aaPredicted RBP17.41■□□□□ 0.38
USP48-213ENST00000529637 RNF214Q8ND24 703 aa17.41■□□□□ 0.38
USP48-213ENST00000529637 FOXD4L4Q8WXT5 416 aaPredicted RBP17.41■□□□□ 0.38
USP48-213ENST00000529637 SYCE3A1L190 88 aa17.41■□□□□ 0.38
USP48-213ENST00000529637 BRPF1P55201 1214 aaPredicted RBP17.41■□□□□ 0.38
USP48-213ENST00000529637 TMEM63CQ9P1W3 806 aa17.41■□□□□ 0.38
USP48-213ENST00000529637 CPS1P31327 1500 aa17.41■□□□□ 0.38
USP48-213ENST00000529637 SLC4A10Q6U841 1118 aa17.4■□□□□ 0.38
USP48-213ENST00000529637 MPNDQ8N594 471 aa17.4■□□□□ 0.38
USP48-213ENST00000529637 ZHX1Q9UKY1 873 aaPredicted RBP17.4■□□□□ 0.38
USP48-213ENST00000529637 TTC21BQ7Z4L5 1316 aa17.4■□□□□ 0.38
USP48-213ENST00000529637 TSC1Q92574 1164 aa17.4■□□□□ 0.38
USP48-213ENST00000529637 MAP7D2Q96T17 732 aa17.4■□□□□ 0.38
USP48-213ENST00000529637 ZDHHC9Q9Y397 364 aa17.4■□□□□ 0.38
USP48-213ENST00000529637 CDK12Q9NYV4 1490 aaPredicted RBP17.4■□□□□ 0.38
USP48-213ENST00000529637 ABCC4O15439 1325 aa17.4■□□□□ 0.38
USP48-213ENST00000529637 DLC1Q96QB1 1528 aa17.4■□□□□ 0.38
USP48-213ENST00000529637 CEBPAP49715 358 aaPredicted RBP17.39■□□□□ 0.37
USP48-213ENST00000529637 AATKQ6ZMQ8 1374 aa17.38■□□□□ 0.37
USP48-213ENST00000529637 TNRQ92752 1358 aa17.38■□□□□ 0.37
USP48-213ENST00000529637 CDC45O75419 566 aa17.38■□□□□ 0.37
USP48-213ENST00000529637 NGDNQ8NEJ9 315 aaKnown RBP17.38■□□□□ 0.37
USP48-213ENST00000529637 RTF1Q92541 710 aaKnown RBP17.38■□□□□ 0.37
USP48-213ENST00000529637 C16orf71Q8IYS4 520 aaPredicted RBP17.38■□□□□ 0.37
USP48-213ENST00000529637 ROBO2Q9HCK4 1378 aa17.37■□□□□ 0.37
USP48-213ENST00000529637 PTCH1Q13635 1447 aa17.37■□□□□ 0.37
USP48-213ENST00000529637 NUCB2P80303 420 aa17.37■□□□□ 0.37
USP48-213ENST00000529637 A0A0U1RQG5 324 aaPredicted RBP17.37■□□□□ 0.37
USP48-213ENST00000529637 DYNC1I1O14576 645 aa17.37■□□□□ 0.37
USP48-213ENST00000529637 SLC4A2P04920 1241 aa17.36■□□□□ 0.37
USP48-213ENST00000529637 HAP1P54257 671 aaPredicted RBP17.36■□□□□ 0.37
USP48-213ENST00000529637 DIP2BQ9P265 1576 aa17.36■□□□□ 0.37
USP48-213ENST00000529637 CDC42BPGQ6DT37 1551 aa17.36■□□□□ 0.37
USP48-213ENST00000529637 SPATA31D1Q6ZQQ2 1576 aa17.36■□□□□ 0.37
USP48-213ENST00000529637 FOXO3O43524 673 aa17.36■□□□□ 0.37
USP48-213ENST00000529637 AMPHP49418 695 aa17.36■□□□□ 0.37
USP48-213ENST00000529637 SMARCA5O60264 1052 aaPredicted RBP17.35■□□□□ 0.37
USP48-213ENST00000529637 RABEP1Q15276 862 aa17.35■□□□□ 0.37
USP48-213ENST00000529637 NUTM2GQ5VZR2 741 aa17.35■□□□□ 0.37
USP48-213ENST00000529637 NECTIN2Q92692 538 aa17.35■□□□□ 0.37
USP48-213ENST00000529637 LTKP29376 864 aa17.34■□□□□ 0.37
USP48-213ENST00000529637 SASS6Q6UVJ0 657 aa17.34■□□□□ 0.37
USP48-213ENST00000529637 LRSAM1Q6UWE0 723 aa17.34■□□□□ 0.37
USP48-213ENST00000529637 SMAP1Q8IYB5 467 aaPredicted RBP17.34■□□□□ 0.37
USP48-213ENST00000529637 USP26Q9BXU7 913 aa17.34■□□□□ 0.37
USP48-213ENST00000529637 TSPYL4Q9UJ04 414 aa17.34■□□□□ 0.37
USP48-213ENST00000529637 AGLP35573 1532 aa17.34■□□□□ 0.37
USP48-213ENST00000529637 C14orf37Q86TY3 774 aa17.34■□□□□ 0.37
USP48-213ENST00000529637 PLEKHM2Q8IWE5 1019 aa17.34■□□□□ 0.37
USP48-213ENST00000529637 OTUD7AQ8TE49 926 aaPredicted RBP17.34■□□□□ 0.37
USP48-213ENST00000529637 MEIS3Q99687 375 aa17.33■□□□□ 0.37
USP48-213ENST00000529637 EID1Q9Y6B2 187 aa17.33■□□□□ 0.37
USP48-213ENST00000529637 TMEM2Q9UHN6 1383 aa17.33■□□□□ 0.36
USP48-213ENST00000529637 FAM177BA6PVY3 158 aa17.33■□□□□ 0.36
USP48-213ENST00000529637 F6X3S4 739 aa17.33■□□□□ 0.36
USP48-213ENST00000529637 CSPP1Q1MSJ5 1256 aa17.32■□□□□ 0.36
USP48-213ENST00000529637 LTV1Q96GA3 475 aaPredicted RBP17.32■□□□□ 0.36
USP48-213ENST00000529637 PIK3R4Q99570 1358 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms