RNA–Protein interactions for RNA: ENST00000529520.5

GPATCH4-214, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-214ENST00000529520 ZNF827Q17R98 1081 aa11.47□□□□□ -0.57
GPATCH4-214ENST00000529520 HSP90AB2PQ58FF8 381 aa11.47□□□□□ -0.57
GPATCH4-214ENST00000529520 PCGF6Q9BYE7 350 aa11.47□□□□□ -0.57
GPATCH4-214ENST00000529520 PRIM1P49642 420 aaKnown RBP11.46□□□□□ -0.57
GPATCH4-214ENST00000529520 SGIP1Q9BQI5 828 aa11.46□□□□□ -0.57
GPATCH4-214ENST00000529520 NSD2O96028 1365 aa11.45□□□□□ -0.58
GPATCH4-214ENST00000529520 ITGB4P16144 1822 aa11.45□□□□□ -0.58
GPATCH4-214ENST00000529520 ZCRB1Q8TBF4 217 aaKnown RBP11.45□□□□□ -0.58
GPATCH4-214ENST00000529520 SYTL4Q96C24 671 aaPredicted RBP11.45□□□□□ -0.58
GPATCH4-214ENST00000529520 QSER1Q2KHR3 1735 aa11.44□□□□□ -0.58
GPATCH4-214ENST00000529520 AKT1S1Q96B36 256 aa11.44□□□□□ -0.58
GPATCH4-214ENST00000529520 FHDC1Q9C0D6 1143 aaPredicted RBP11.43□□□□□ -0.58
GPATCH4-214ENST00000529520 MTFR1LQ9H019 292 aa11.43□□□□□ -0.58
GPATCH4-214ENST00000529520 EMILIN1Q9Y6C2 1016 aa11.43□□□□□ -0.58
GPATCH4-214ENST00000529520 COL24A1Q17RW2 1714 aa11.43□□□□□ -0.58
GPATCH4-214ENST00000529520 NSD3Q9BZ95 1437 aa11.43□□□□□ -0.58
GPATCH4-214ENST00000529520 RTL1A6NKG5 1358 aa11.42□□□□□ -0.58
GPATCH4-214ENST00000529520 SYT17Q9BSW7 474 aa11.42□□□□□ -0.58
GPATCH4-214ENST00000529520 TOGARAM1Q9Y4F4 1720 aa11.42□□□□□ -0.58
GPATCH4-214ENST00000529520 TAF1LQ8IZX4 1826 aa11.42□□□□□ -0.58
GPATCH4-214ENST00000529520 INSRP06213 1382 aa11.41□□□□□ -0.58
GPATCH4-214ENST00000529520 ANKRD26Q9UPS8 1709 aa11.41□□□□□ -0.58
GPATCH4-214ENST00000529520 YY1P25490 414 aa11.41□□□□□ -0.58
GPATCH4-214ENST00000529520 CDCA8Q53HL2 280 aa11.41□□□□□ -0.58
GPATCH4-214ENST00000529520 CHD4Q14839 1912 aa11.41□□□□□ -0.58
GPATCH4-214ENST00000529520 PNPLA7Q6ZV29 1317 aa11.4□□□□□ -0.58
GPATCH4-214ENST00000529520 SLC27A3Q5K4L6 730 aa11.4□□□□□ -0.58
GPATCH4-214ENST00000529520 POLR3GLQ9BT43 218 aa11.4□□□□□ -0.58
GPATCH4-214ENST00000529520 TIMELESSQ9UNS1 1208 aa11.4□□□□□ -0.58
GPATCH4-214ENST00000529520 GOLGB1Q14789 3259 aaKnown RBP11.4□□□□□ -0.58
GPATCH4-214ENST00000529520 FLT4P35916 1363 aa11.4□□□□□ -0.59
GPATCH4-214ENST00000529520 PPM1GO15355 546 aaPredicted RBP11.39□□□□□ -0.59
GPATCH4-214ENST00000529520 CYP27B1O15528 508 aa11.39□□□□□ -0.59
GPATCH4-214ENST00000529520 TATP17735 454 aaPredicted RBP11.39□□□□□ -0.59
GPATCH4-214ENST00000529520 PKD1L3Q7Z443 1732 aa11.39□□□□□ -0.59
GPATCH4-214ENST00000529520 RAPGEF4Q8WZA2 1011 aa11.39□□□□□ -0.59
GPATCH4-214ENST00000529520 ARXQ96QS3 562 aa11.38□□□□□ -0.59
GPATCH4-214ENST00000529520 C5P01031 1676 aa11.38□□□□□ -0.59
GPATCH4-214ENST00000529520 CGNL1Q0VF96 1302 aa11.37□□□□□ -0.59
GPATCH4-214ENST00000529520 SMG6Q86US8 1419 aaKnown RBP11.37□□□□□ -0.59
GPATCH4-214ENST00000529520 HSPA5P11021 654 aaKnown RBP11.37□□□□□ -0.59
GPATCH4-214ENST00000529520 MPRIPQ6WCQ1 1025 aa11.37□□□□□ -0.59
GPATCH4-214ENST00000529520 EYA1Q99502 592 aa11.37□□□□□ -0.59
GPATCH4-214ENST00000529520 TFCP2L1Q9NZI6 479 aa11.37□□□□□ -0.59
GPATCH4-214ENST00000529520 POLKQ9UBT6 870 aa11.37□□□□□ -0.59
GPATCH4-214ENST00000529520 CCNL1Q9UK58 526 aaPredicted RBP11.37□□□□□ -0.59
GPATCH4-214ENST00000529520 KIF24Q5T7B8 1368 aa11.37□□□□□ -0.59
GPATCH4-214ENST00000529520 CLSPNQ9HAW4 1339 aa11.36□□□□□ -0.59
GPATCH4-214ENST00000529520 TNNT2P45379 298 aaPredicted RBP11.36□□□□□ -0.59
GPATCH4-214ENST00000529520 SMIM5Q71RC9 77 aa11.36□□□□□ -0.59
GPATCH4-214ENST00000529520 COL23A1Q86Y22 540 aaPredicted RBP11.36□□□□□ -0.59
GPATCH4-214ENST00000529520 WASHC2AQ641Q2 1341 aa11.35□□□□□ -0.59
GPATCH4-214ENST00000529520 NCAPD2Q15021 1401 aa11.35□□□□□ -0.59
GPATCH4-214ENST00000529520 DCAF8L1A6NGE4 600 aa11.35□□□□□ -0.59
GPATCH4-214ENST00000529520 AMIGO3Q86WK7 504 aa11.35□□□□□ -0.59
GPATCH4-214ENST00000529520 PCDH11XQ9BZA7 1347 aa11.35□□□□□ -0.59
GPATCH4-214ENST00000529520 PCDH11YQ9BZA8 1340 aa11.35□□□□□ -0.59
GPATCH4-214ENST00000529520 KLHL34Q8N239 644 aa11.34□□□□□ -0.59
GPATCH4-214ENST00000529520 SLC16A10Q8TF71 515 aa11.34□□□□□ -0.59
GPATCH4-214ENST00000529520 PANK3Q9H999 370 aa11.34□□□□□ -0.59
GPATCH4-214ENST00000529520 UBR3Q6ZT12 1888 aa11.34□□□□□ -0.59
GPATCH4-214ENST00000529520 EIF4G2P78344 907 aaKnown RBP eCLIP11.33□□□□□ -0.6
GPATCH4-214ENST00000529520 EIF4A2Q14240 407 aaKnown RBP11.33□□□□□ -0.6
GPATCH4-214ENST00000529520 NKX1-1Q15270 411 aaPredicted RBP11.33□□□□□ -0.6
GPATCH4-214ENST00000529520 NLGN2Q8NFZ4 835 aa11.33□□□□□ -0.6
GPATCH4-214ENST00000529520 PIGBQ92521 554 aa11.33□□□□□ -0.6
GPATCH4-214ENST00000529520 C4BP0C0L5 1744 aa11.32□□□□□ -0.6
GPATCH4-214ENST00000529520 PALLDQ8WX93 1383 aa11.32□□□□□ -0.6
GPATCH4-214ENST00000529520 MSH5O43196 834 aa11.32□□□□□ -0.6
GPATCH4-214ENST00000529520 MSL1Q68DK7 614 aa11.32□□□□□ -0.6
GPATCH4-214ENST00000529520 MAP3K5Q99683 1374 aa11.31□□□□□ -0.6
GPATCH4-214ENST00000529520 CCER1Q8TC90 406 aaPredicted RBP11.31□□□□□ -0.6
GPATCH4-214ENST00000529520 PHKG2P15735 406 aa11.3□□□□□ -0.6
GPATCH4-214ENST00000529520 POLD1P28340 1107 aa11.3□□□□□ -0.6
GPATCH4-214ENST00000529520 ZNF784Q8NCA9 323 aaPredicted RBP11.3□□□□□ -0.6
GPATCH4-214ENST00000529520 ASAP1Q9ULH1 1129 aa11.3□□□□□ -0.6
GPATCH4-214ENST00000529520 SPG7Q9UQ90 795 aa11.3□□□□□ -0.6
GPATCH4-214ENST00000529520 GPR162Q16538 588 aa11.29□□□□□ -0.6
GPATCH4-214ENST00000529520 LINC00116Q8NCU8 138 aa11.29□□□□□ -0.6
GPATCH4-214ENST00000529520 VIRMAQ69YN4 1812 aaKnown RBP11.28□□□□□ -0.6
GPATCH4-214ENST00000529520 ITPK1Q13572 414 aa11.28□□□□□ -0.6
GPATCH4-214ENST00000529520 IFNL2Q8IZJ0 200 aa11.28□□□□□ -0.6
GPATCH4-214ENST00000529520 ATG3Q9NT62 314 aa11.28□□□□□ -0.6
GPATCH4-214ENST00000529520 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.28□□□□□ -0.6
GPATCH4-214ENST00000529520 MYH14Q7Z406 1995 aaKnown RBP11.28□□□□□ -0.6
GPATCH4-214ENST00000529520 LOC102724428A0A0B4J2F2 783 aa11.27□□□□□ -0.61
GPATCH4-214ENST00000529520 PHF14O94880 888 aa11.27□□□□□ -0.61
GPATCH4-214ENST00000529520 YBX3P16989 372 aaKnown RBP eCLIP11.27□□□□□ -0.61
GPATCH4-214ENST00000529520 SIK1P57059 783 aa11.27□□□□□ -0.61
GPATCH4-214ENST00000529520 AEBP1Q8IUX7 1158 aa11.27□□□□□ -0.61
GPATCH4-214ENST00000529520 PELP1Q8IZL8 1130 aaKnown RBP11.27□□□□□ -0.61
GPATCH4-214ENST00000529520 SMARCC1Q92922 1105 aaPredicted RBP11.27□□□□□ -0.61
GPATCH4-214ENST00000529520 SLC4A9Q96Q91 983 aa11.27□□□□□ -0.61
GPATCH4-214ENST00000529520 IGSF1Q8N6C5 1336 aa11.27□□□□□ -0.61
GPATCH4-214ENST00000529520 TMOD3Q9NYL9 352 aa11.26□□□□□ -0.61
GPATCH4-214ENST00000529520 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.25□□□□□ -0.61
GPATCH4-214ENST00000529520 ATP6V1AP38606 617 aa11.25□□□□□ -0.61
GPATCH4-214ENST00000529520 MORC1Q86VD1 984 aa11.25□□□□□ -0.61
GPATCH4-214ENST00000529520 AK7Q96M32 723 aa11.25□□□□□ -0.61
GPATCH4-214ENST00000529520 COL5A3P25940 1745 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms