RNA–Protein interactions for RNA: ENST00000529276.1

NDUFS3-207, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-207ENST00000529276 NUP188Q5SRE5 1749 aa28.56■■■□□ 2.16
NDUFS3-207ENST00000529276 NHSQ6T4R5 1651 aa28.56■■■□□ 2.16
NDUFS3-207ENST00000529276 ZCRB1Q8TBF4 217 aaKnown RBP28.56■■■□□ 2.16
NDUFS3-207ENST00000529276 NBPF14Q5TI25 921 aa28.53■■■□□ 2.16
NDUFS3-207ENST00000529276 MORC1Q86VD1 984 aa28.53■■■□□ 2.16
NDUFS3-207ENST00000529276 TATP17735 454 aaPredicted RBP28.52■■■□□ 2.16
NDUFS3-207ENST00000529276 SHANK3Q9BYB0 1731 aa28.5■■■□□ 2.15
NDUFS3-207ENST00000529276 AMER1Q5JTC6 1135 aaPredicted RBP28.5■■■□□ 2.15
NDUFS3-207ENST00000529276 NCAPD2Q15021 1401 aa28.5■■■□□ 2.15
NDUFS3-207ENST00000529276 PROM2Q8N271 834 aa28.48■■■□□ 2.15
NDUFS3-207ENST00000529276 EYA1Q99502 592 aa28.48■■■□□ 2.15
NDUFS3-207ENST00000529276 KAT6BQ8WYB5 2073 aa28.47■■■□□ 2.15
NDUFS3-207ENST00000529276 EIF4A2Q14240 407 aaKnown RBP28.46■■■□□ 2.15
NDUFS3-207ENST00000529276 TXNRD1Q16881 649 aa28.46■■■□□ 2.15
NDUFS3-207ENST00000529276 PCDH11XQ9BZA7 1347 aa28.44■■■□□ 2.14
NDUFS3-207ENST00000529276 PCDH11YQ9BZA8 1340 aa28.44■■■□□ 2.14
NDUFS3-207ENST00000529276 BTAF1O14981 1849 aa28.44■■■□□ 2.14
NDUFS3-207ENST00000529276 PER1O15534 1290 aaPredicted RBP28.44■■■□□ 2.14
NDUFS3-207ENST00000529276 SYTL4Q96C24 671 aaPredicted RBP28.43■■■□□ 2.14
NDUFS3-207ENST00000529276 PRIM1P49642 420 aaKnown RBP28.42■■■□□ 2.14
NDUFS3-207ENST00000529276 LRP5O75197 1615 aa28.42■■■□□ 2.14
NDUFS3-207ENST00000529276 DOT1LQ8TEK3 1739 aa28.41■■■□□ 2.14
NDUFS3-207ENST00000529276 ANO8Q9HCE9 1232 aaPredicted RBP28.41■■■□□ 2.14
NDUFS3-207ENST00000529276 SRCAPQ6ZRS2 3230 aa28.4■■■□□ 2.14
NDUFS3-207ENST00000529276 PKD1L3Q7Z443 1732 aa28.38■■■□□ 2.13
NDUFS3-207ENST00000529276 CC2D1BQ5T0F9 858 aaKnown RBP28.38■■■□□ 2.13
NDUFS3-207ENST00000529276 CYP27B1O15528 508 aa28.37■■■□□ 2.13
NDUFS3-207ENST00000529276 SPG7Q9UQ90 795 aa28.37■■■□□ 2.13
NDUFS3-207ENST00000529276 IGSF1Q8N6C5 1336 aa28.37■■■□□ 2.13
NDUFS3-207ENST00000529276 STK32BQ9NY57 414 aa28.34■■■□□ 2.13
NDUFS3-207ENST00000529276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.34■■■□□ 2.13
NDUFS3-207ENST00000529276 NPC1L1Q9UHC9 1359 aa28.34■■■□□ 2.13
NDUFS3-207ENST00000529276 PLEKHG2Q9H7P9 1386 aa28.31■■■□□ 2.12
NDUFS3-207ENST00000529276 MTHFSP49914 203 aa28.3■■■□□ 2.12
NDUFS3-207ENST00000529276 SLC27A3Q5K4L6 730 aa28.3■■■□□ 2.12
NDUFS3-207ENST00000529276 NKX1-1Q15270 411 aaPredicted RBP28.29■■■□□ 2.12
NDUFS3-207ENST00000529276 SLC15A2Q16348 729 aa28.29■■■□□ 2.12
NDUFS3-207ENST00000529276 LRRC4BQ9NT99 713 aa28.29■■■□□ 2.12
NDUFS3-207ENST00000529276 CNGB1Q14028 1251 aaPredicted RBP28.28■■■□□ 2.12
NDUFS3-207ENST00000529276 PAPPAQ13219 1627 aa28.28■■■□□ 2.12
NDUFS3-207ENST00000529276 IL13P35225 146 aa28.27■■■□□ 2.12
NDUFS3-207ENST00000529276 IFNL2Q8IZJ0 200 aa28.26■■■□□ 2.11
NDUFS3-207ENST00000529276 TOGARAM1Q9Y4F4 1720 aa28.26■■■□□ 2.11
NDUFS3-207ENST00000529276 PHKG2P15735 406 aa28.25■■■□□ 2.11
NDUFS3-207ENST00000529276 MPRIPQ6WCQ1 1025 aa28.25■■■□□ 2.11
NDUFS3-207ENST00000529276 AEBP1Q8IUX7 1158 aa28.25■■■□□ 2.11
NDUFS3-207ENST00000529276 CASZ1Q86V15 1759 aa28.24■■■□□ 2.11
NDUFS3-207ENST00000529276 LY75O60449 1722 aa28.23■■■□□ 2.11
NDUFS3-207ENST00000529276 SULT6B1Q6IMI4 303 aa28.23■■■□□ 2.11
NDUFS3-207ENST00000529276 PDGFDQ9GZP0 370 aaPredicted RBP28.23■■■□□ 2.11
NDUFS3-207ENST00000529276 SPON1Q9HCB6 807 aa28.23■■■□□ 2.11
NDUFS3-207ENST00000529276 KCNQ4P56696 695 aa28.22■■■□□ 2.11
NDUFS3-207ENST00000529276 ZNF827Q17R98 1081 aa28.22■■■□□ 2.11
NDUFS3-207ENST00000529276 PLEKHO1Q53GL0 409 aaPredicted RBP28.22■■■□□ 2.11
NDUFS3-207ENST00000529276 CCNL1Q9UK58 526 aaPredicted RBP28.22■■■□□ 2.11
NDUFS3-207ENST00000529276 KDRP35968 1356 aa28.22■■■□□ 2.11
NDUFS3-207ENST00000529276 AMOTQ4VCS5 1084 aa28.2■■■□□ 2.1
NDUFS3-207ENST00000529276 PIGBQ92521 554 aa28.19■■■□□ 2.1
NDUFS3-207ENST00000529276 AKT1S1Q96B36 256 aa28.19■■■□□ 2.1
NDUFS3-207ENST00000529276 ITGB4P16144 1822 aa28.19■■■□□ 2.1
NDUFS3-207ENST00000529276 PALLDQ8WX93 1383 aa28.19■■■□□ 2.1
NDUFS3-207ENST00000529276 ZNF530Q6P9A1 599 aaPredicted RBP28.18■■■□□ 2.1
NDUFS3-207ENST00000529276 DIAPH1O60610 1272 aaKnown RBP28.17■■■□□ 2.1
NDUFS3-207ENST00000529276 ZBTB7AO95365 584 aa28.17■■■□□ 2.1
NDUFS3-207ENST00000529276 SMARCC1Q92922 1105 aaPredicted RBP28.17■■■□□ 2.1
NDUFS3-207ENST00000529276 TMOD3Q9NYL9 352 aa28.17■■■□□ 2.1
NDUFS3-207ENST00000529276 HSP90AB1P08238 724 aaKnown RBP28.16■■■□□ 2.1
NDUFS3-207ENST00000529276 DCAF5Q96JK2 942 aa28.13■■■□□ 2.09
NDUFS3-207ENST00000529276 PPP1R1BQ9UD71 204 aaPredicted RBP28.13■■■□□ 2.09
NDUFS3-207ENST00000529276 COL3A1P02461 1466 aaPredicted RBP28.13■■■□□ 2.09
NDUFS3-207ENST00000529276 HMOX1P09601 288 aa28.12■■■□□ 2.09
NDUFS3-207ENST00000529276 C1orf141Q5JVX7 400 aa28.12■■■□□ 2.09
NDUFS3-207ENST00000529276 MTFR1LQ9H019 292 aa28.11■■■□□ 2.09
NDUFS3-207ENST00000529276 TFCP2L1Q9NZI6 479 aa28.11■■■□□ 2.09
NDUFS3-207ENST00000529276 ATF5Q9Y2D1 282 aaPredicted RBP28.11■■■□□ 2.09
NDUFS3-207ENST00000529276 KDM6AO15550 1401 aaPredicted RBP28.09■■■□□ 2.09
NDUFS3-207ENST00000529276 ERVV-2B6SEH9 535 aa28.09■■■□□ 2.09
NDUFS3-207ENST00000529276 HMGB2P26583 209 aaKnown RBP28.09■■■□□ 2.09
NDUFS3-207ENST00000529276 PNPLA7Q6ZV29 1317 aa28.09■■■□□ 2.09
NDUFS3-207ENST00000529276 ASAP1Q9ULH1 1129 aa28.08■■■□□ 2.09
NDUFS3-207ENST00000529276 QSER1Q2KHR3 1735 aa28.08■■■□□ 2.09
NDUFS3-207ENST00000529276 PTGER2P43116 358 aa28.07■■■□□ 2.08
NDUFS3-207ENST00000529276 C5P01031 1676 aa28.07■■■□□ 2.08
NDUFS3-207ENST00000529276 U2SURPO15042 1029 aaKnown RBP28.06■■■□□ 2.08
NDUFS3-207ENST00000529276 CFAP53Q96M91 514 aa28.06■■■□□ 2.08
NDUFS3-207ENST00000529276 LOC102724428A0A0B4J2F2 783 aa28.05■■■□□ 2.08
NDUFS3-207ENST00000529276 PPP2R1AP30153 589 aa28.05■■■□□ 2.08
NDUFS3-207ENST00000529276 SIK1P57059 783 aa28.05■■■□□ 2.08
NDUFS3-207ENST00000529276 CABP4P57796 275 aa28.05■■■□□ 2.08
NDUFS3-207ENST00000529276 ATG3Q9NT62 314 aa28.05■■■□□ 2.08
NDUFS3-207ENST00000529276 TUBGCP6Q96RT7 1819 aa28.04■■■□□ 2.08
NDUFS3-207ENST00000529276 AKAP4Q5JQC9 854 aa28.03■■■□□ 2.08
NDUFS3-207ENST00000529276 SLC16A10Q8TF71 515 aa28.03■■■□□ 2.08
NDUFS3-207ENST00000529276 TAF1LQ8IZX4 1826 aa28.02■■■□□ 2.08
NDUFS3-207ENST00000529276 SGIP1Q9BQI5 828 aa28.01■■■□□ 2.07
NDUFS3-207ENST00000529276 C4BP0C0L5 1744 aa27.99■■■□□ 2.07
NDUFS3-207ENST00000529276 MTHFSDQ2M296 383 aaKnown RBP27.99■■■□□ 2.07
NDUFS3-207ENST00000529276 ATP6V1AP38606 617 aa27.98■■■□□ 2.07
NDUFS3-207ENST00000529276 COL23A1Q86Y22 540 aaPredicted RBP27.98■■■□□ 2.07
NDUFS3-207ENST00000529276 AK7Q96M32 723 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms