RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 CAMKK2Q96RR4 588 aa23.67■■□□□ 1.38
USP35-202ENST00000528910 APBA3O96018 575 aa23.66■■□□□ 1.38
USP35-202ENST00000528910 EIF4A2Q14240 407 aaKnown RBP23.66■■□□□ 1.38
USP35-202ENST00000528910 BCL11BQ9C0K0 894 aaPredicted RBP23.66■■□□□ 1.38
USP35-202ENST00000528910 RAPGEF4Q8WZA2 1011 aa23.65■■□□□ 1.38
USP35-202ENST00000528910 IGSF1Q8N6C5 1336 aa23.64■■□□□ 1.38
USP35-202ENST00000528910 EYA1Q99502 592 aa23.64■■□□□ 1.37
USP35-202ENST00000528910 KAT6BQ8WYB5 2073 aa23.64■■□□□ 1.37
USP35-202ENST00000528910 TOGARAM1Q9Y4F4 1720 aa23.64■■□□□ 1.37
USP35-202ENST00000528910 TATP17735 454 aaPredicted RBP23.63■■□□□ 1.37
USP35-202ENST00000528910 EZH2Q15910 746 aaKnown RBP23.63■■□□□ 1.37
USP35-202ENST00000528910 PTF1AQ7RTS3 328 aa23.63■■□□□ 1.37
USP35-202ENST00000528910 ZCRB1Q8TBF4 217 aaKnown RBP23.63■■□□□ 1.37
USP35-202ENST00000528910 CC2D1BQ5T0F9 858 aaKnown RBP23.62■■□□□ 1.37
USP35-202ENST00000528910 PCDH11XQ9BZA7 1347 aa23.6■■□□□ 1.37
USP35-202ENST00000528910 PCDH11YQ9BZA8 1340 aa23.6■■□□□ 1.37
USP35-202ENST00000528910 PLSCR1O15162 318 aa23.6■■□□□ 1.37
USP35-202ENST00000528910 COL3A1P02461 1466 aaPredicted RBP23.6■■□□□ 1.37
USP35-202ENST00000528910 DDX54Q8TDD1 881 aaKnown RBP23.59■■□□□ 1.37
USP35-202ENST00000528910 ITGB4P16144 1822 aa23.59■■□□□ 1.37
USP35-202ENST00000528910 LY75O60449 1722 aa23.59■■□□□ 1.37
USP35-202ENST00000528910 KCNQ2O43526 872 aa23.57■■□□□ 1.36
USP35-202ENST00000528910 PAPPAQ13219 1627 aa23.57■■□□□ 1.36
USP35-202ENST00000528910 KDRP35968 1356 aa23.56■■□□□ 1.36
USP35-202ENST00000528910 ACSBG1Q96GR2 724 aa23.56■■□□□ 1.36
USP35-202ENST00000528910 MTHFSP49914 203 aa23.55■■□□□ 1.36
USP35-202ENST00000528910 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.55■■□□□ 1.36
USP35-202ENST00000528910 IL13P35225 146 aa23.54■■□□□ 1.36
USP35-202ENST00000528910 LRP5O75197 1615 aa23.54■■□□□ 1.36
USP35-202ENST00000528910 CYP27B1O15528 508 aa23.53■■□□□ 1.36
USP35-202ENST00000528910 ZEB1P37275 1124 aaPredicted RBP23.53■■□□□ 1.36
USP35-202ENST00000528910 SPG7Q9UQ90 795 aa23.51■■□□□ 1.35
USP35-202ENST00000528910 SRCAPQ6ZRS2 3230 aa23.5■■□□□ 1.35
USP35-202ENST00000528910 CASZ1Q86V15 1759 aa23.48■■□□□ 1.35
USP35-202ENST00000528910 VIRMAQ69YN4 1812 aaKnown RBP23.48■■□□□ 1.35
USP35-202ENST00000528910 NKX1-1Q15270 411 aaPredicted RBP23.48■■□□□ 1.35
USP35-202ENST00000528910 AEBP1Q8IUX7 1158 aa23.48■■□□□ 1.35
USP35-202ENST00000528910 PROM2Q8N271 834 aa23.48■■□□□ 1.35
USP35-202ENST00000528910 PSDA5PKW4 1024 aaPredicted RBP23.47■■□□□ 1.35
USP35-202ENST00000528910 PRIM1P49642 420 aaKnown RBP23.47■■□□□ 1.35
USP35-202ENST00000528910 TXNRD1Q16881 649 aa23.47■■□□□ 1.35
USP35-202ENST00000528910 QSER1Q2KHR3 1735 aa23.47■■□□□ 1.35
USP35-202ENST00000528910 SCN11AQ9UI33 1791 aa23.45■■□□□ 1.34
USP35-202ENST00000528910 DIAPH1O60610 1272 aaKnown RBP23.45■■□□□ 1.34
USP35-202ENST00000528910 CNGB1Q14028 1251 aaPredicted RBP23.45■■□□□ 1.34
USP35-202ENST00000528910 SULT6B1Q6IMI4 303 aa23.45■■□□□ 1.34
USP35-202ENST00000528910 PHKG2P15735 406 aa23.44■■□□□ 1.34
USP35-202ENST00000528910 R3HDM1Q15032 1099 aaKnown RBP23.44■■□□□ 1.34
USP35-202ENST00000528910 TAF1LQ8IZX4 1826 aa23.43■■□□□ 1.34
USP35-202ENST00000528910 NBPF14Q5TI25 921 aa23.43■■□□□ 1.34
USP35-202ENST00000528910 IFNL2Q8IZJ0 200 aa23.43■■□□□ 1.34
USP35-202ENST00000528910 SYTL4Q96C24 671 aaPredicted RBP23.43■■□□□ 1.34
USP35-202ENST00000528910 ANO8Q9HCE9 1232 aaPredicted RBP23.43■■□□□ 1.34
USP35-202ENST00000528910 TUBGCP6Q96RT7 1819 aa23.43■■□□□ 1.34
USP35-202ENST00000528910 C5P01031 1676 aa23.42■■□□□ 1.34
USP35-202ENST00000528910 ADAMTS7Q9UKP4 1686 aa23.42■■□□□ 1.34
USP35-202ENST00000528910 PPP2R1AP30153 589 aa23.42■■□□□ 1.34
USP35-202ENST00000528910 AMOTQ4VCS5 1084 aa23.42■■□□□ 1.34
USP35-202ENST00000528910 PLEKHO1Q53GL0 409 aaPredicted RBP23.41■■□□□ 1.34
USP35-202ENST00000528910 KDM6AO15550 1401 aaPredicted RBP23.41■■□□□ 1.34
USP35-202ENST00000528910 SLC27A3Q5K4L6 730 aa23.38■■□□□ 1.33
USP35-202ENST00000528910 ZNF831Q5JPB2 1677 aa23.38■■□□□ 1.33
USP35-202ENST00000528910 ZNF530Q6P9A1 599 aaPredicted RBP23.37■■□□□ 1.33
USP35-202ENST00000528910 CFAP53Q96M91 514 aa23.37■■□□□ 1.33
USP35-202ENST00000528910 HSP90AB1P08238 724 aaKnown RBP23.36■■□□□ 1.33
USP35-202ENST00000528910 LRRC4BQ9NT99 713 aa23.36■■□□□ 1.33
USP35-202ENST00000528910 PALLDQ8WX93 1383 aa23.36■■□□□ 1.33
USP35-202ENST00000528910 MRC1P22897 1456 aa23.36■■□□□ 1.33
USP35-202ENST00000528910 HMOX1P09601 288 aa23.35■■□□□ 1.33
USP35-202ENST00000528910 MPRIPQ6WCQ1 1025 aa23.34■■□□□ 1.33
USP35-202ENST00000528910 DCAF5Q96JK2 942 aa23.34■■□□□ 1.33
USP35-202ENST00000528910 DDX10Q13206 875 aaKnown RBP23.33■■□□□ 1.33
USP35-202ENST00000528910 SLC15A2Q16348 729 aa23.33■■□□□ 1.33
USP35-202ENST00000528910 PIGBQ92521 554 aa23.33■■□□□ 1.33
USP35-202ENST00000528910 STK32BQ9NY57 414 aa23.33■■□□□ 1.33
USP35-202ENST00000528910 CICQ96RK0 1608 aaPredicted RBP23.33■■□□□ 1.32
USP35-202ENST00000528910 TMOD3Q9NYL9 352 aa23.32■■□□□ 1.32
USP35-202ENST00000528910 C4BP0C0L5 1744 aa23.31■■□□□ 1.32
USP35-202ENST00000528910 ERVV-2B6SEH9 535 aa23.31■■□□□ 1.32
USP35-202ENST00000528910 C1orf141Q5JVX7 400 aa23.31■■□□□ 1.32
USP35-202ENST00000528910 U2SURPO15042 1029 aaKnown RBP23.3■■□□□ 1.32
USP35-202ENST00000528910 SMARCC1Q92922 1105 aaPredicted RBP23.3■■□□□ 1.32
USP35-202ENST00000528910 CCNL1Q9UK58 526 aaPredicted RBP23.3■■□□□ 1.32
USP35-202ENST00000528910 COL24A1Q17RW2 1714 aa23.3■■□□□ 1.32
USP35-202ENST00000528910 COL5A3P25940 1745 aaPredicted RBP23.29■■□□□ 1.32
USP35-202ENST00000528910 ZNF827Q17R98 1081 aa23.29■■□□□ 1.32
USP35-202ENST00000528910 AKAP4Q5JQC9 854 aa23.29■■□□□ 1.32
USP35-202ENST00000528910 SIPA1L3O60292 1781 aaPredicted RBP23.29■■□□□ 1.32
USP35-202ENST00000528910 RALBP1Q15311 655 aa23.28■■□□□ 1.32
USP35-202ENST00000528910 AKT1S1Q96B36 256 aa23.28■■□□□ 1.32
USP35-202ENST00000528910 NUDCQ9Y266 331 aa23.28■■□□□ 1.32
USP35-202ENST00000528910 UBR3Q6ZT12 1888 aa23.28■■□□□ 1.32
USP35-202ENST00000528910 RSPH6AQ9H0K4 717 aa23.27■■□□□ 1.32
USP35-202ENST00000528910 KCNQ4P56696 695 aa23.26■■□□□ 1.31
USP35-202ENST00000528910 MTHFSDQ2M296 383 aaKnown RBP23.26■■□□□ 1.31
USP35-202ENST00000528910 UBR2Q8IWV8 1755 aa23.25■■□□□ 1.31
USP35-202ENST00000528910 ASAP1Q9ULH1 1129 aa23.24■■□□□ 1.31
USP35-202ENST00000528910 TJP1Q07157 1748 aa23.24■■□□□ 1.31
USP35-202ENST00000528910 PDGFDQ9GZP0 370 aaPredicted RBP23.23■■□□□ 1.31
USP35-202ENST00000528910 ATG3Q9NT62 314 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms