RNA–Protein interactions for RNA: ENST00000527792.5

LTBP3-209, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-209ENST00000527792 IGSF1Q8N6C5 1336 aa20.4■□□□□ 0.86
LTBP3-209ENST00000527792 PNNQ9H307 717 aaKnown RBP20.4■□□□□ 0.86
LTBP3-209ENST00000527792 USP35Q9P2H5 1018 aa20.4■□□□□ 0.86
LTBP3-209ENST00000527792 FAM208AQ9UK61 1670 aaKnown RBP20.4■□□□□ 0.86
LTBP3-209ENST00000527792 NEFMP07197 916 aa20.39■□□□□ 0.85
LTBP3-209ENST00000527792 AEBP1Q8IUX7 1158 aa20.39■□□□□ 0.85
LTBP3-209ENST00000527792 CCDC146Q8IYE0 955 aa20.39■□□□□ 0.85
LTBP3-209ENST00000527792 CAMKK2Q96RR4 588 aa20.38■□□□□ 0.85
LTBP3-209ENST00000527792 RGPD1P0DJD0 1748 aa20.38■□□□□ 0.85
LTBP3-209ENST00000527792 CRB1P82279 1406 aa20.37■□□□□ 0.85
LTBP3-209ENST00000527792 FCHSD2O94868 740 aa20.37■□□□□ 0.85
LTBP3-209ENST00000527792 APBA3O96018 575 aa20.37■□□□□ 0.85
LTBP3-209ENST00000527792 PRKAR2BP31323 418 aa20.37■□□□□ 0.85
LTBP3-209ENST00000527792 CARD10Q9BWT7 1032 aa20.37■□□□□ 0.85
LTBP3-209ENST00000527792 LRP5O75197 1615 aa20.36■□□□□ 0.85
LTBP3-209ENST00000527792 RSPH6AQ9H0K4 717 aa20.36■□□□□ 0.85
LTBP3-209ENST00000527792 MAPK8IP3Q9UPT6 1336 aa20.35■□□□□ 0.85
LTBP3-209ENST00000527792 PDE3BQ13370 1112 aa20.34■□□□□ 0.85
LTBP3-209ENST00000527792 RAPGEF4Q8WZA2 1011 aa20.34■□□□□ 0.85
LTBP3-209ENST00000527792 RUNDC1Q96C34 613 aa20.34■□□□□ 0.85
LTBP3-209ENST00000527792 DISP2A7MBM2 1401 aa20.34■□□□□ 0.85
LTBP3-209ENST00000527792 BARGINQ6ZT62 677 aa20.33■□□□□ 0.85
LTBP3-209ENST00000527792 SENP3-EIF4A1A0A087X0R7 540 aa20.32■□□□□ 0.84
LTBP3-209ENST00000527792 TATP17735 454 aaPredicted RBP20.32■□□□□ 0.84
LTBP3-209ENST00000527792 KDRP35968 1356 aa20.32■□□□□ 0.84
LTBP3-209ENST00000527792 TCP11L2Q8N4U5 519 aa20.31■□□□□ 0.84
LTBP3-209ENST00000527792 YTHDC1Q96MU7 727 aaKnown RBP20.31■□□□□ 0.84
LTBP3-209ENST00000527792 THSD7AQ9UPZ6 1657 aa20.31■□□□□ 0.84
LTBP3-209ENST00000527792 PLEKHF1Q96S99 279 aa20.3■□□□□ 0.84
LTBP3-209ENST00000527792 NCAPD2Q15021 1401 aa20.29■□□□□ 0.84
LTBP3-209ENST00000527792 IL2RBP14784 551 aa20.29■□□□□ 0.84
LTBP3-209ENST00000527792 APAF1O14727 1248 aa20.28■□□□□ 0.84
LTBP3-209ENST00000527792 PLEKHO1Q53GL0 409 aaPredicted RBP20.28■□□□□ 0.84
LTBP3-209ENST00000527792 PHACTR3Q96KR7 559 aa20.28■□□□□ 0.84
LTBP3-209ENST00000527792 THRAP3Q9Y2W1 955 aaKnown RBP20.28■□□□□ 0.84
LTBP3-209ENST00000527792 HNRNPUQ00839 825 aaKnown RBP eCLIP20.27■□□□□ 0.84
LTBP3-209ENST00000527792 NEUROD2Q15784 382 aa20.27■□□□□ 0.84
LTBP3-209ENST00000527792 SALL2Q9Y467 1007 aaPredicted RBP20.27■□□□□ 0.84
LTBP3-209ENST00000527792 NBPF14Q5TI25 921 aa20.26■□□□□ 0.83
LTBP3-209ENST00000527792 RRP7AQ9Y3A4 280 aaKnown RBP20.26■□□□□ 0.83
LTBP3-209ENST00000527792 MEGF6O75095 1541 aa20.26■□□□□ 0.83
LTBP3-209ENST00000527792 SPG7Q9UQ90 795 aa20.25■□□□□ 0.83
LTBP3-209ENST00000527792 MTHFSDQ2M296 383 aaKnown RBP20.24■□□□□ 0.83
LTBP3-209ENST00000527792 AMOTQ4VCS5 1084 aa20.24■□□□□ 0.83
LTBP3-209ENST00000527792 GAS2L2Q8NHY3 880 aa20.24■□□□□ 0.83
LTBP3-209ENST00000527792 PARP4Q9UKK3 1724 aaKnown RBP20.24■□□□□ 0.83
LTBP3-209ENST00000527792 TMPOP42166 694 aaKnown RBP20.23■□□□□ 0.83
LTBP3-209ENST00000527792 NFE2L2Q16236 605 aa20.23■□□□□ 0.83
LTBP3-209ENST00000527792 CDCA7Q9BWT1 371 aaPredicted RBP20.23■□□□□ 0.83
LTBP3-209ENST00000527792 TNS1Q9HBL0 1735 aaKnown RBP20.22■□□□□ 0.83
LTBP3-209ENST00000527792 RIPK4P57078 832 aa20.22■□□□□ 0.83
LTBP3-209ENST00000527792 ZNF530Q6P9A1 599 aaPredicted RBP20.22■□□□□ 0.83
LTBP3-209ENST00000527792 ZCRB1Q8TBF4 217 aaKnown RBP20.22■□□□□ 0.83
LTBP3-209ENST00000527792 OVOS2A0A0G2JMS6 1433 aa20.21■□□□□ 0.83
LTBP3-209ENST00000527792 C1orf141Q5JVX7 400 aa20.21■□□□□ 0.83
LTBP3-209ENST00000527792 WNK3Q9BYP7 1800 aa20.2■□□□□ 0.82
LTBP3-209ENST00000527792 EXOC5O00471 708 aa20.2■□□□□ 0.82
LTBP3-209ENST00000527792 DDB1Q16531 1140 aa20.19■□□□□ 0.82
LTBP3-209ENST00000527792 DDX54Q8TDD1 881 aaKnown RBP20.19■□□□□ 0.82
LTBP3-209ENST00000527792 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.19■□□□□ 0.82
LTBP3-209ENST00000527792 LMOD3Q0VAK6 560 aa20.17■□□□□ 0.82
LTBP3-209ENST00000527792 AKAP4Q5JQC9 854 aa20.17■□□□□ 0.82
LTBP3-209ENST00000527792 RTF1Q92541 710 aaKnown RBP20.17■□□□□ 0.82
LTBP3-209ENST00000527792 PCDH11XQ9BZA7 1347 aa20.17■□□□□ 0.82
LTBP3-209ENST00000527792 PCDH11YQ9BZA8 1340 aa20.17■□□□□ 0.82
LTBP3-209ENST00000527792 GNAT3A8MTJ3 354 aa20.16■□□□□ 0.82
LTBP3-209ENST00000527792 IFNL2Q8IZJ0 200 aa20.16■□□□□ 0.82
LTBP3-209ENST00000527792 SPON1Q9HCB6 807 aa20.16■□□□□ 0.82
LTBP3-209ENST00000527792 PLEKHG2Q9H7P9 1386 aa20.16■□□□□ 0.82
LTBP3-209ENST00000527792 PKD1L3Q7Z443 1732 aa20.16■□□□□ 0.82
LTBP3-209ENST00000527792 NGEFQ8N5V2 710 aa20.15■□□□□ 0.82
LTBP3-209ENST00000527792 PPP1R1BQ9UD71 204 aaPredicted RBP20.15■□□□□ 0.82
LTBP3-209ENST00000527792 MAP3K5Q99683 1374 aa20.15■□□□□ 0.82
LTBP3-209ENST00000527792 KCNQ2O43526 872 aa20.14■□□□□ 0.81
LTBP3-209ENST00000527792 PHKG2P15735 406 aa20.14■□□□□ 0.81
LTBP3-209ENST00000527792 TNS2Q63HR2 1409 aa20.13■□□□□ 0.81
LTBP3-209ENST00000527792 PLSCR1O15162 318 aa20.13■□□□□ 0.81
LTBP3-209ENST00000527792 DCTN1Q14203 1278 aa20.13■□□□□ 0.81
LTBP3-209ENST00000527792 DLG5Q8TDM6 1919 aa20.13■□□□□ 0.81
LTBP3-209ENST00000527792 LRRC37A3O60309 1634 aa20.13■□□□□ 0.81
LTBP3-209ENST00000527792 CYP27B1O15528 508 aa20.12■□□□□ 0.81
LTBP3-209ENST00000527792 HSP90AB1P08238 724 aaKnown RBP20.12■□□□□ 0.81
LTBP3-209ENST00000527792 YY1P25490 414 aa20.12■□□□□ 0.81
LTBP3-209ENST00000527792 MPRIPQ6WCQ1 1025 aa20.12■□□□□ 0.81
LTBP3-209ENST00000527792 MCM10Q7L590 875 aa20.12■□□□□ 0.81
LTBP3-209ENST00000527792 TRIM35Q9UPQ4 493 aa20.12■□□□□ 0.81
LTBP3-209ENST00000527792 HTATSF1O43719 755 aaKnown RBP20.11■□□□□ 0.81
LTBP3-209ENST00000527792 CCDC27Q2M243 656 aa20.11■□□□□ 0.81
LTBP3-209ENST00000527792 PTF1AQ7RTS3 328 aa20.11■□□□□ 0.81
LTBP3-209ENST00000527792 WWC1Q8IX03 1113 aa20.11■□□□□ 0.81
LTBP3-209ENST00000527792 NCBP3Q53F19 620 aaKnown RBP20.1■□□□□ 0.81
LTBP3-209ENST00000527792 THUMPD2Q9BTF0 503 aaKnown RBP20.1■□□□□ 0.81
LTBP3-209ENST00000527792 BCL11BQ9C0K0 894 aaPredicted RBP20.1■□□□□ 0.81
LTBP3-209ENST00000527792 SHANK3Q9BYB0 1731 aa20.1■□□□□ 0.81
LTBP3-209ENST00000527792 ZBED9Q6R2W3 1325 aa20.09■□□□□ 0.81
LTBP3-209ENST00000527792 DCAF8L1A6NGE4 600 aa20.08■□□□□ 0.81
LTBP3-209ENST00000527792 RNMTO43148 476 aaKnown RBP20.08■□□□□ 0.81
LTBP3-209ENST00000527792 MARCH10Q8NA82 808 aaPredicted RBP20.08■□□□□ 0.81
LTBP3-209ENST00000527792 DCAF5Q96JK2 942 aa20.08■□□□□ 0.81
LTBP3-209ENST00000527792 LGR6Q9HBX8 967 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms