RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 AMOTL1Q8IY63 956 aa18.33■□□□□ 0.52
USP47-207ENST00000527733 LRRC59Q96AG4 307 aaKnown RBP18.33■□□□□ 0.52
USP47-207ENST00000527733 PLEKHH1Q9ULM0 1364 aa18.33■□□□□ 0.52
USP47-207ENST00000527733 TRIM27P14373 513 aa18.32■□□□□ 0.52
USP47-207ENST00000527733 PTPRCP08575 1304 aa18.32■□□□□ 0.52
USP47-207ENST00000527733 HOXC9P31274 260 aa18.32■□□□□ 0.52
USP47-207ENST00000527733 SLC4A3P48751 1232 aa18.32■□□□□ 0.52
USP47-207ENST00000527733 FLIIQ13045 1269 aa18.32■□□□□ 0.52
USP47-207ENST00000527733 CHD1LQ86WJ1 897 aa18.32■□□□□ 0.52
USP47-207ENST00000527733 SIL1Q9H173 461 aa18.32■□□□□ 0.52
USP47-207ENST00000527733 DNAJC5Q9H3Z4 198 aa18.32■□□□□ 0.52
USP47-207ENST00000527733 SF3B2Q13435 895 aaKnown RBP18.32■□□□□ 0.52
USP47-207ENST00000527733 WASHC4Q2M389 1173 aa18.32■□□□□ 0.52
USP47-207ENST00000527733 NLRP1Q9C000 1473 aa18.32■□□□□ 0.52
USP47-207ENST00000527733 METP08581 1390 aa18.32■□□□□ 0.52
USP47-207ENST00000527733 TRDNQ13061 729 aa18.31■□□□□ 0.52
USP47-207ENST00000527733 ZCRB1Q8TBF4 217 aaKnown RBP18.31■□□□□ 0.52
USP47-207ENST00000527733 TET3O43151 1660 aa18.31■□□□□ 0.52
USP47-207ENST00000527733 AKAP4Q5JQC9 854 aa18.31■□□□□ 0.52
USP47-207ENST00000527733 DNAAF4Q8WXU2 420 aa18.31■□□□□ 0.52
USP47-207ENST00000527733 F6X3S4 739 aa18.31■□□□□ 0.52
USP47-207ENST00000527733 CDK11BP21127 795 aaKnown RBP18.31■□□□□ 0.52
USP47-207ENST00000527733 SHROOM2Q13796 1616 aa18.3■□□□□ 0.52
USP47-207ENST00000527733 MTHFSDQ2M296 383 aaKnown RBP18.3■□□□□ 0.52
USP47-207ENST00000527733 CPLX2Q6PUV4 134 aaKnown RBP18.3■□□□□ 0.52
USP47-207ENST00000527733 SYNE3Q6ZMZ3 975 aa18.3■□□□□ 0.52
USP47-207ENST00000527733 TEX13AQ9BXU3 409 aaPredicted RBP18.29■□□□□ 0.52
USP47-207ENST00000527733 CSPP1Q1MSJ5 1256 aa18.29■□□□□ 0.52
USP47-207ENST00000527733 LMTK3Q96Q04 1460 aa18.29■□□□□ 0.52
USP47-207ENST00000527733 HIP1O00291 1037 aa18.29■□□□□ 0.52
USP47-207ENST00000527733 CDC42BPBQ9Y5S2 1711 aa18.29■□□□□ 0.52
USP47-207ENST00000527733 IQGAP3Q86VI3 1631 aa18.29■□□□□ 0.52
USP47-207ENST00000527733 FAM184AQ8NB25 1140 aa18.28■□□□□ 0.52
USP47-207ENST00000527733 PHACTR3Q96KR7 559 aa18.28■□□□□ 0.52
USP47-207ENST00000527733 TBC1D2BQ9UPU7 963 aa18.28■□□□□ 0.52
USP47-207ENST00000527733 CCDC158Q5M9N0 1113 aa18.28■□□□□ 0.52
USP47-207ENST00000527733 SYAP1Q96A49 352 aaPredicted RBP18.28■□□□□ 0.52
USP47-207ENST00000527733 DNAJC2Q99543 621 aaKnown RBP18.28■□□□□ 0.52
USP47-207ENST00000527733 MPHOSPH8Q99549 860 aa18.28■□□□□ 0.52
USP47-207ENST00000527733 CEP126Q9P2H0 1117 aa18.28■□□□□ 0.52
USP47-207ENST00000527733 SBNO1A3KN83 1393 aa18.27■□□□□ 0.52
USP47-207ENST00000527733 SNRPA1P09661 255 aaKnown RBP18.27■□□□□ 0.52
USP47-207ENST00000527733 FBXW7Q969H0 707 aa18.27■□□□□ 0.52
USP47-207ENST00000527733 MYD88Q99836 296 aa18.27■□□□□ 0.52
USP47-207ENST00000527733 RSPH6AQ9H0K4 717 aa18.27■□□□□ 0.52
USP47-207ENST00000527733 ZNF652Q9Y2D9 606 aa18.26■□□□□ 0.51
USP47-207ENST00000527733 EXOC6BQ9Y2D4 811 aa18.26■□□□□ 0.51
USP47-207ENST00000527733 H3BQV1 296 aa18.26■□□□□ 0.51
USP47-207ENST00000527733 IFFO2Q5TF58 517 aa18.26■□□□□ 0.51
USP47-207ENST00000527733 IL13P35225 146 aa18.25■□□□□ 0.51
USP47-207ENST00000527733 ARHGAP45Q92619 1136 aa18.25■□□□□ 0.51
USP47-207ENST00000527733 SLAIN2Q9P270 581 aa18.25■□□□□ 0.51
USP47-207ENST00000527733 ATP6V1DQ9Y5K8 247 aa18.25■□□□□ 0.51
USP47-207ENST00000527733 IL1RAPL2Q9NP60 686 aa18.25■□□□□ 0.51
USP47-207ENST00000527733 IL2RBP14784 551 aa18.25■□□□□ 0.51
USP47-207ENST00000527733 AKAP17AQ02040 695 aaKnown RBP18.25■□□□□ 0.51
USP47-207ENST00000527733 L1TD1Q5T7N2 865 aaKnown RBP18.24■□□□□ 0.51
USP47-207ENST00000527733 GZF1Q9H116 711 aaPredicted RBP18.24■□□□□ 0.51
USP47-207ENST00000527733 KIF1BO60333 1816 aa18.24■□□□□ 0.51
USP47-207ENST00000527733 PIK3R4Q99570 1358 aa18.24■□□□□ 0.51
USP47-207ENST00000527733 HSP90AB3PQ58FF7 597 aa18.24■□□□□ 0.51
USP47-207ENST00000527733 FOXD4L5Q5VV16 416 aaPredicted RBP18.24■□□□□ 0.51
USP47-207ENST00000527733 AACSQ86V21 672 aa18.24■□□□□ 0.51
USP47-207ENST00000527733 FOXD4L4Q8WXT5 416 aaPredicted RBP18.24■□□□□ 0.51
USP47-207ENST00000527733 RALYLQ86SE5 291 aaKnown RBP18.24■□□□□ 0.51
USP47-207ENST00000527733 GNL3LQ9NVN8 582 aaKnown RBP18.24■□□□□ 0.51
USP47-207ENST00000527733 TTC39AQ5SRH9 613 aa18.23■□□□□ 0.51
USP47-207ENST00000527733 KIF1BPQ96EK5 621 aa18.23■□□□□ 0.51
USP47-207ENST00000527733 GOLGA6L6A8MZA4 724 aa18.23■□□□□ 0.51
USP47-207ENST00000527733 TULP1O00294 542 aaPredicted RBP18.23■□□□□ 0.51
USP47-207ENST00000527733 CCDC34Q96HJ3 373 aa18.23■□□□□ 0.51
USP47-207ENST00000527733 NPHP4O75161 1426 aaPredicted RBP18.23■□□□□ 0.51
USP47-207ENST00000527733 PI4KAP2A4QPH2 592 aa18.22■□□□□ 0.51
USP47-207ENST00000527733 CPLX1O14810 134 aa18.22■□□□□ 0.51
USP47-207ENST00000527733 KLHL34Q8N239 644 aa18.22■□□□□ 0.51
USP47-207ENST00000527733 PI4KAP1Q8N8J0 262 aa18.22■□□□□ 0.51
USP47-207ENST00000527733 C8orf58Q8NAV2 365 aa18.22■□□□□ 0.51
USP47-207ENST00000527733 UNC13BO14795 1591 aa18.22■□□□□ 0.51
USP47-207ENST00000527733 BICDL1Q6ZP65 573 aa18.22■□□□□ 0.51
USP47-207ENST00000527733 TRIM34Q9BYJ4 488 aa18.21■□□□□ 0.51
USP47-207ENST00000527733 MAP3K5Q99683 1374 aa18.21■□□□□ 0.51
USP47-207ENST00000527733 RAB11FIP3O75154 756 aa18.21■□□□□ 0.51
USP47-207ENST00000527733 SF3A1Q15459 793 aaKnown RBP18.21■□□□□ 0.5
USP47-207ENST00000527733 CCDC85AQ96PX6 553 aaPredicted RBP18.21■□□□□ 0.5
USP47-207ENST00000527733 BACH2Q9BYV9 841 aa18.21■□□□□ 0.5
USP47-207ENST00000527733 LRRFIP2Q9Y608 721 aaKnown RBP18.21■□□□□ 0.5
USP47-207ENST00000527733 NRDCO43847 1150 aa18.2■□□□□ 0.5
USP47-207ENST00000527733 PSMA5P28066 241 aa18.2■□□□□ 0.5
USP47-207ENST00000527733 MAP3K2Q9Y2U5 619 aa18.2■□□□□ 0.5
USP47-207ENST00000527733 A0A087WZG4 1122 aa18.2■□□□□ 0.5
USP47-207ENST00000527733 ZPR1O75312 459 aa18.2■□□□□ 0.5
USP47-207ENST00000527733 SLC39A6Q13433 755 aa18.2■□□□□ 0.5
USP47-207ENST00000527733 DDB1Q16531 1140 aa18.2■□□□□ 0.5
USP47-207ENST00000527733 ZBTB3Q9H5J0 574 aa18.2■□□□□ 0.5
USP47-207ENST00000527733 RIMBP3CA6NJZ7 1639 aa18.2■□□□□ 0.5
USP47-207ENST00000527733 RIMBP3BA6NNM3 1639 aa18.2■□□□□ 0.5
USP47-207ENST00000527733 RIMBP3Q9UFD9 1639 aa18.2■□□□□ 0.5
USP47-207ENST00000527733 C8orf37Q96NL8 207 aa18.2■□□□□ 0.5
USP47-207ENST00000527733 ARHGEF10O15013 1369 aa18.2■□□□□ 0.5
USP47-207ENST00000527733 DDX11L8A8MPP1 907 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms