RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 PPP1R1BQ9UD71 204 aaPredicted RBP18.51■□□□□ 0.55
CAPN1-207ENST00000527189 SPON1Q9HCB6 807 aa18.5■□□□□ 0.55
CAPN1-207ENST00000527189 RAPGEF4Q8WZA2 1011 aa18.49■□□□□ 0.55
CAPN1-207ENST00000527189 ANO8Q9HCE9 1232 aaPredicted RBP18.49■□□□□ 0.55
CAPN1-207ENST00000527189 POLR3GLQ9BT43 218 aa18.48■□□□□ 0.55
CAPN1-207ENST00000527189 STK32BQ9NY57 414 aa18.48■□□□□ 0.55
CAPN1-207ENST00000527189 DCAF8L1A6NGE4 600 aa18.47■□□□□ 0.55
CAPN1-207ENST00000527189 TATP17735 454 aaPredicted RBP18.47■□□□□ 0.55
CAPN1-207ENST00000527189 SLC15A2Q16348 729 aa18.47■□□□□ 0.55
CAPN1-207ENST00000527189 WASHC2AQ641Q2 1341 aa18.47■□□□□ 0.55
CAPN1-207ENST00000527189 GOLGB1Q14789 3259 aaKnown RBP18.47■□□□□ 0.55
CAPN1-207ENST00000527189 EMILIN1Q9Y6C2 1016 aa18.46■□□□□ 0.55
CAPN1-207ENST00000527189 KAT6BQ8WYB5 2073 aa18.45■□□□□ 0.54
CAPN1-207ENST00000527189 MEGF6O75095 1541 aa18.45■□□□□ 0.54
CAPN1-207ENST00000527189 SLC27A3Q5K4L6 730 aa18.45■□□□□ 0.54
CAPN1-207ENST00000527189 RGPD2P0DJD1 1756 aa18.45■□□□□ 0.54
CAPN1-207ENST00000527189 PRIM1P49642 420 aaKnown RBP18.44■□□□□ 0.54
CAPN1-207ENST00000527189 C1QTNF8P60827 252 aa18.44■□□□□ 0.54
CAPN1-207ENST00000527189 USHBP1Q8N6Y0 703 aa18.44■□□□□ 0.54
CAPN1-207ENST00000527189 PANK3Q9H999 370 aa18.44■□□□□ 0.54
CAPN1-207ENST00000527189 PPM1GO15355 546 aaPredicted RBP18.43■□□□□ 0.54
CAPN1-207ENST00000527189 POLKQ9UBT6 870 aa18.43■□□□□ 0.54
CAPN1-207ENST00000527189 BTAF1O14981 1849 aa18.43■□□□□ 0.54
CAPN1-207ENST00000527189 SYTL4Q96C24 671 aaPredicted RBP18.42■□□□□ 0.54
CAPN1-207ENST00000527189 PCDH11XQ9BZA7 1347 aa18.41■□□□□ 0.54
CAPN1-207ENST00000527189 PCDH11YQ9BZA8 1340 aa18.41■□□□□ 0.54
CAPN1-207ENST00000527189 NSD2O96028 1365 aa18.41■□□□□ 0.54
CAPN1-207ENST00000527189 HMGB2P26583 209 aaKnown RBP18.4■□□□□ 0.54
CAPN1-207ENST00000527189 LRRC4BQ9NT99 713 aa18.4■□□□□ 0.54
CAPN1-207ENST00000527189 NCAPD2Q15021 1401 aa18.4■□□□□ 0.54
CAPN1-207ENST00000527189 MAP2P11137 1827 aaKnown RBP18.39■□□□□ 0.54
CAPN1-207ENST00000527189 PDGFDQ9GZP0 370 aaPredicted RBP18.39■□□□□ 0.53
CAPN1-207ENST00000527189 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.39■□□□□ 0.532e-6■■□□□ 11.9
CAPN1-207ENST00000527189 SHANK3Q9BYB0 1731 aa18.39■□□□□ 0.53
CAPN1-207ENST00000527189 ANKRD26Q9UPS8 1709 aa18.39■□□□□ 0.53
CAPN1-207ENST00000527189 EYA1Q99502 592 aa18.38■□□□□ 0.53
CAPN1-207ENST00000527189 MTFR1LQ9H019 292 aa18.38■□□□□ 0.53
CAPN1-207ENST00000527189 SPG7Q9UQ90 795 aa18.37■□□□□ 0.53
CAPN1-207ENST00000527189 CYP27B1O15528 508 aa18.36■□□□□ 0.53
CAPN1-207ENST00000527189 ZBTB7AO95365 584 aa18.36■□□□□ 0.53
CAPN1-207ENST00000527189 PAPPAQ13219 1627 aa18.36■□□□□ 0.53
CAPN1-207ENST00000527189 AKT1S1Q96B36 256 aa18.36■□□□□ 0.53
CAPN1-207ENST00000527189 PLEKHG2Q9H7P9 1386 aa18.36■□□□□ 0.53
CAPN1-207ENST00000527189 KNSTRNQ9Y448 316 aa18.36■□□□□ 0.53
CAPN1-207ENST00000527189 PTGER2P43116 358 aa18.35■□□□□ 0.53
CAPN1-207ENST00000527189 TNNT2P45379 298 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-207ENST00000527189 NKX1-1Q15270 411 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-207ENST00000527189 SLC16A10Q8TF71 515 aa18.35■□□□□ 0.53
CAPN1-207ENST00000527189 DOT1LQ8TEK3 1739 aa18.35■□□□□ 0.53
CAPN1-207ENST00000527189 EIF4A2Q14240 407 aaKnown RBP18.34■□□□□ 0.53
CAPN1-207ENST00000527189 ZNF827Q17R98 1081 aa18.34■□□□□ 0.53
CAPN1-207ENST00000527189 MORC1Q86VD1 984 aa18.34■□□□□ 0.53
CAPN1-207ENST00000527189 ATF5Q9Y2D1 282 aaPredicted RBP18.34■□□□□ 0.53
CAPN1-207ENST00000527189 CCNL1Q9UK58 526 aaPredicted RBP18.32■□□□□ 0.52
CAPN1-207ENST00000527189 KIF7Q2M1P5 1343 aa18.31■□□□□ 0.52
CAPN1-207ENST00000527189 SMARCC1Q92922 1105 aaPredicted RBP18.31■□□□□ 0.52
CAPN1-207ENST00000527189 SGIP1Q9BQI5 828 aa18.31■□□□□ 0.52
CAPN1-207ENST00000527189 TFCP2L1Q9NZI6 479 aa18.31■□□□□ 0.52
CAPN1-207ENST00000527189 LY75O60449 1722 aa18.31■□□□□ 0.52
CAPN1-207ENST00000527189 PKD1L3Q7Z443 1732 aa18.31■□□□□ 0.52
CAPN1-207ENST00000527189 IGSF1Q8N6C5 1336 aa18.3■□□□□ 0.52
CAPN1-207ENST00000527189 MPRIPQ6WCQ1 1025 aa18.3■□□□□ 0.52
CAPN1-207ENST00000527189 IFNL2Q8IZJ0 200 aa18.3■□□□□ 0.52
CAPN1-207ENST00000527189 AMER1Q5JTC6 1135 aaPredicted RBP18.29■□□□□ 0.52
CAPN1-207ENST00000527189 KCNQ4P56696 695 aa18.28■□□□□ 0.52
CAPN1-207ENST00000527189 PNPLA7Q6ZV29 1317 aa18.27■□□□□ 0.52
CAPN1-207ENST00000527189 QSER1Q2KHR3 1735 aa18.27■□□□□ 0.52
CAPN1-207ENST00000527189 PHKG2P15735 406 aa18.27■□□□□ 0.52
CAPN1-207ENST00000527189 SYT17Q9BSW7 474 aa18.27■□□□□ 0.52
CAPN1-207ENST00000527189 FHDC1Q9C0D6 1143 aaPredicted RBP18.27■□□□□ 0.52
CAPN1-207ENST00000527189 PALLDQ8WX93 1383 aa18.27■□□□□ 0.51
CAPN1-207ENST00000527189 PER1O15534 1290 aaPredicted RBP18.26■□□□□ 0.51
CAPN1-207ENST00000527189 PIGBQ92521 554 aa18.26■□□□□ 0.51
CAPN1-207ENST00000527189 ARXQ96QS3 562 aa18.26■□□□□ 0.51
CAPN1-207ENST00000527189 HSP90AB1P08238 724 aaKnown RBP18.25■□□□□ 0.51
CAPN1-207ENST00000527189 AMOTQ4VCS5 1084 aa18.25■□□□□ 0.51
CAPN1-207ENST00000527189 PLEKHO1Q53GL0 409 aaPredicted RBP18.25■□□□□ 0.51
CAPN1-207ENST00000527189 FLAD1Q8NFF5 587 aa18.24■□□□□ 0.51
CAPN1-207ENST00000527189 TMOD3Q9NYL9 352 aa18.24■□□□□ 0.51
CAPN1-207ENST00000527189 MAP3K5Q99683 1374 aa18.23■□□□□ 0.51
CAPN1-207ENST00000527189 POLD1P28340 1107 aa18.23■□□□□ 0.51
CAPN1-207ENST00000527189 ITGB4P16144 1822 aa18.22■□□□□ 0.51
CAPN1-207ENST00000527189 ERVV-2B6SEH9 535 aa18.22■□□□□ 0.51
CAPN1-207ENST00000527189 TOGARAM1Q9Y4F4 1720 aa18.21■□□□□ 0.51
CAPN1-207ENST00000527189 GIGYF1O75420 1035 aaPredicted RBP18.21■□□□□ 0.51
CAPN1-207ENST00000527189 IL13P35225 146 aa18.21■□□□□ 0.51
CAPN1-207ENST00000527189 DCAF5Q96JK2 942 aa18.21■□□□□ 0.51
CAPN1-207ENST00000527189 NPC1L1Q9UHC9 1359 aa18.2■□□□□ 0.5
CAPN1-207ENST00000527189 COL23A1Q86Y22 540 aaPredicted RBP18.2■□□□□ 0.5
CAPN1-207ENST00000527189 KDRP35968 1356 aa18.19■□□□□ 0.5
CAPN1-207ENST00000527189 LOC102724428A0A0B4J2F2 783 aa18.19■□□□□ 0.5
CAPN1-207ENST00000527189 MTHFSP49914 203 aa18.19■□□□□ 0.5
CAPN1-207ENST00000527189 SIK1P57059 783 aa18.19■□□□□ 0.5
CAPN1-207ENST00000527189 SULT6B1Q6IMI4 303 aa18.19■□□□□ 0.5
CAPN1-207ENST00000527189 COL24A1Q17RW2 1714 aa18.18■□□□□ 0.5
CAPN1-207ENST00000527189 MSH5O43196 834 aa18.18■□□□□ 0.5
CAPN1-207ENST00000527189 ASAP1Q9ULH1 1129 aa18.18■□□□□ 0.5
CAPN1-207ENST00000527189 C5P01031 1676 aa18.18■□□□□ 0.5
CAPN1-207ENST00000527189 ZNF530Q6P9A1 599 aaPredicted RBP18.17■□□□□ 0.5
CAPN1-207ENST00000527189 AK7Q96M32 723 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms