RNA–Protein interactions for RNA: ENST00000527016.1

PDXDC2P-202, Transcript of pyridoxal dependent decarboxylase domain containing 2, pseudogene, humanhuman

TSL 3 BASIC

Gene PDXDC2P, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC2P-202ENST00000527016 ST20-MTHFSA0A0A6YYL1 179 aa28.83■■■□□ 2.21
PDXDC2P-202ENST00000527016 SLC16A10Q8TF71 515 aa28.83■■■□□ 2.21
PDXDC2P-202ENST00000527016 PNPLA7Q6ZV29 1317 aa28.83■■■□□ 2.21
PDXDC2P-202ENST00000527016 MAP3K5Q99683 1374 aa28.83■■■□□ 2.21
PDXDC2P-202ENST00000527016 ZCRB1Q8TBF4 217 aaKnown RBP28.82■■■□□ 2.2
PDXDC2P-202ENST00000527016 ANKRD36BQ8N2N9 1353 aa28.82■■■□□ 2.2
PDXDC2P-202ENST00000527016 TESK2Q96S53 571 aa28.8■■■□□ 2.2
PDXDC2P-202ENST00000527016 SHANK3Q9BYB0 1731 aa28.79■■■□□ 2.2
PDXDC2P-202ENST00000527016 LY75O60449 1722 aa28.78■■■□□ 2.2
PDXDC2P-202ENST00000527016 MSH5O43196 834 aa28.78■■■□□ 2.2
PDXDC2P-202ENST00000527016 MEGF6O75095 1541 aa28.78■■■□□ 2.2
PDXDC2P-202ENST00000527016 RRS1Q15050 365 aaKnown RBP28.77■■■□□ 2.2
PDXDC2P-202ENST00000527016 CCNL1Q9UK58 526 aaPredicted RBP28.77■■■□□ 2.2
PDXDC2P-202ENST00000527016 USHBP1Q8N6Y0 703 aa28.76■■■□□ 2.19
PDXDC2P-202ENST00000527016 NSD2O96028 1365 aa28.75■■■□□ 2.19
PDXDC2P-202ENST00000527016 GGNBP2Q9H3C7 697 aa28.74■■■□□ 2.19
PDXDC2P-202ENST00000527016 SENP3-EIF4A1A0A087X0R7 540 aa28.73■■■□□ 2.19
PDXDC2P-202ENST00000527016 COL24A1Q17RW2 1714 aa28.73■■■□□ 2.19
PDXDC2P-202ENST00000527016 RTL1A6NKG5 1358 aa28.73■■■□□ 2.19
PDXDC2P-202ENST00000527016 USP47Q96K76 1375 aa28.73■■■□□ 2.19
PDXDC2P-202ENST00000527016 SLC24A1O60721 1099 aa28.72■■■□□ 2.19
PDXDC2P-202ENST00000527016 NBPF6Q5VWK0 638 aa28.72■■■□□ 2.19
PDXDC2P-202ENST00000527016 RAPGEF4Q8WZA2 1011 aa28.72■■■□□ 2.19
PDXDC2P-202ENST00000527016 NBPF4Q96M43 638 aa28.72■■■□□ 2.19
PDXDC2P-202ENST00000527016 SMG6Q86US8 1419 aaKnown RBP28.71■■■□□ 2.19
PDXDC2P-202ENST00000527016 NLGN2Q8NFZ4 835 aa28.71■■■□□ 2.19
PDXDC2P-202ENST00000527016 C1QTNF8P60827 252 aa28.69■■■□□ 2.18
PDXDC2P-202ENST00000527016 FYB1O15117 783 aa28.68■■■□□ 2.18
PDXDC2P-202ENST00000527016 TATP17735 454 aaPredicted RBP28.68■■■□□ 2.18
PDXDC2P-202ENST00000527016 TMF1P82094 1093 aa28.67■■■□□ 2.18
PDXDC2P-202ENST00000527016 MSL1Q68DK7 614 aa28.67■■■□□ 2.18
PDXDC2P-202ENST00000527016 COL23A1Q86Y22 540 aaPredicted RBP28.66■■■□□ 2.18
PDXDC2P-202ENST00000527016 CGNL1Q0VF96 1302 aa28.66■■■□□ 2.18
PDXDC2P-202ENST00000527016 UTRNP46939 3433 aa28.65■■■□□ 2.18
PDXDC2P-202ENST00000527016 KIF20BQ96Q89 1820 aa28.65■■■□□ 2.18
PDXDC2P-202ENST00000527016 HSP90AB2PQ58FF8 381 aa28.63■■■□□ 2.17
PDXDC2P-202ENST00000527016 C5P01031 1676 aa28.63■■■□□ 2.17
PDXDC2P-202ENST00000527016 PCDH11XQ9BZA7 1347 aa28.62■■■□□ 2.17
PDXDC2P-202ENST00000527016 PCDH11YQ9BZA8 1340 aa28.62■■■□□ 2.17
PDXDC2P-202ENST00000527016 GIGYF1O75420 1035 aaPredicted RBP28.61■■■□□ 2.17
PDXDC2P-202ENST00000527016 MPRIPQ6WCQ1 1025 aa28.61■■■□□ 2.17
PDXDC2P-202ENST00000527016 INSRP06213 1382 aa28.59■■■□□ 2.17
PDXDC2P-202ENST00000527016 YBX3P16989 372 aaKnown RBP eCLIP28.58■■■□□ 2.17
PDXDC2P-202ENST00000527016 FLT4P35916 1363 aa28.58■■■□□ 2.17
PDXDC2P-202ENST00000527016 PALLDQ8WX93 1383 aa28.58■■■□□ 2.17
PDXDC2P-202ENST00000527016 GRIN3BO60391 1043 aa28.57■■■□□ 2.16
PDXDC2P-202ENST00000527016 TAF1LQ8IZX4 1826 aa28.57■■■□□ 2.16
PDXDC2P-202ENST00000527016 ITGB4P16144 1822 aa28.55■■■□□ 2.16
PDXDC2P-202ENST00000527016 CDCA8Q53HL2 280 aa28.54■■■□□ 2.16
PDXDC2P-202ENST00000527016 PPM1GO15355 546 aaPredicted RBP28.53■■■□□ 2.16
PDXDC2P-202ENST00000527016 FLAD1Q8NFF5 587 aa28.53■■■□□ 2.16
PDXDC2P-202ENST00000527016 CYP27B1O15528 508 aa28.52■■■□□ 2.16
PDXDC2P-202ENST00000527016 HMGB2P26583 209 aaKnown RBP28.52■■■□□ 2.16
PDXDC2P-202ENST00000527016 AK7Q96M32 723 aa28.52■■■□□ 2.16
PDXDC2P-202ENST00000527016 EMILIN1Q9Y6C2 1016 aa28.52■■■□□ 2.16
PDXDC2P-202ENST00000527016 TOGARAM1Q9Y4F4 1720 aa28.52■■■□□ 2.16
PDXDC2P-202ENST00000527016 KIF24Q5T7B8 1368 aa28.5■■■□□ 2.15
PDXDC2P-202ENST00000527016 C4BP0C0L5 1744 aa28.5■■■□□ 2.15
PDXDC2P-202ENST00000527016 SMARCC1Q92922 1105 aaPredicted RBP28.5■■■□□ 2.15
PDXDC2P-202ENST00000527016 PHF14O94880 888 aa28.49■■■□□ 2.15
PDXDC2P-202ENST00000527016 NSD3Q9BZ95 1437 aa28.49■■■□□ 2.15
PDXDC2P-202ENST00000527016 PKD1L3Q7Z443 1732 aa28.48■■■□□ 2.15
PDXDC2P-202ENST00000527016 CD2APQ9Y5K6 639 aa28.47■■■□□ 2.15
PDXDC2P-202ENST00000527016 CARD14Q9BXL6 1004 aa28.46■■■□□ 2.15
PDXDC2P-202ENST00000527016 SMIM5Q71RC9 77 aa28.45■■■□□ 2.14
PDXDC2P-202ENST00000527016 PIGBQ92521 554 aa28.45■■■□□ 2.14
PDXDC2P-202ENST00000527016 SPG7Q9UQ90 795 aa28.45■■■□□ 2.14
PDXDC2P-202ENST00000527016 WWC3Q9ULE0 1092 aa28.44■■■□□ 2.14
PDXDC2P-202ENST00000527016 UBR3Q6ZT12 1888 aa28.43■■■□□ 2.14
PDXDC2P-202ENST00000527016 ATP10DQ9P241 1426 aa28.43■■■□□ 2.14
PDXDC2P-202ENST00000527016 MAP2P11137 1827 aaKnown RBP28.42■■■□□ 2.14
PDXDC2P-202ENST00000527016 AMIGO3Q86WK7 504 aa28.42■■■□□ 2.14
PDXDC2P-202ENST00000527016 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.41■■■□□ 2.14
PDXDC2P-202ENST00000527016 TMOD3Q9NYL9 352 aa28.4■■■□□ 2.14
PDXDC2P-202ENST00000527016 POLR3GLQ9BT43 218 aa28.39■■■□□ 2.14
PDXDC2P-202ENST00000527016 LOC102724428A0A0B4J2F2 783 aa28.38■■■□□ 2.13
PDXDC2P-202ENST00000527016 SIK1P57059 783 aa28.38■■■□□ 2.13
PDXDC2P-202ENST00000527016 ZNF526Q8TF50 670 aaPredicted RBP28.38■■■□□ 2.13
PDXDC2P-202ENST00000527016 NKX1-1Q15270 411 aaPredicted RBP28.37■■■□□ 2.13
PDXDC2P-202ENST00000527016 LINC00116Q8NCU8 138 aa28.37■■■□□ 2.13
PDXDC2P-202ENST00000527016 EYA1Q99502 592 aa28.37■■■□□ 2.13
PDXDC2P-202ENST00000527016 GPBP1L1Q9HC44 474 aaPredicted RBP28.37■■■□□ 2.13
PDXDC2P-202ENST00000527016 ANKRD26Q9UPS8 1709 aa28.37■■■□□ 2.13
PDXDC2P-202ENST00000527016 IGSF1Q8N6C5 1336 aa28.37■■■□□ 2.13
PDXDC2P-202ENST00000527016 WASHC2AQ641Q2 1341 aa28.36■■■□□ 2.13
PDXDC2P-202ENST00000527016 GOLGB1Q14789 3259 aaKnown RBP28.36■■■□□ 2.13
PDXDC2P-202ENST00000527016 NCAPD2Q15021 1401 aa28.35■■■□□ 2.13
PDXDC2P-202ENST00000527016 GNPATO15228 680 aa28.35■■■□□ 2.13
PDXDC2P-202ENST00000527016 SSFA2P28290 1259 aa28.35■■■□□ 2.13
PDXDC2P-202ENST00000527016 ATP6V1AP38606 617 aa28.34■■■□□ 2.13
PDXDC2P-202ENST00000527016 ASAP1Q9ULH1 1129 aa28.34■■■□□ 2.13
PDXDC2P-202ENST00000527016 TNNT2P45379 298 aaPredicted RBP28.33■■■□□ 2.13
PDXDC2P-202ENST00000527016 IFNL2Q8IZJ0 200 aa28.33■■■□□ 2.13
PDXDC2P-202ENST00000527016 PHKG2P15735 406 aa28.31■■■□□ 2.12
PDXDC2P-202ENST00000527016 ITPK1Q13572 414 aa28.31■■■□□ 2.12
PDXDC2P-202ENST00000527016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.31■■■□□ 2.129e-12■■■■■ 26.8
PDXDC2P-202ENST00000527016 POLKQ9UBT6 870 aa28.3■■■□□ 2.12
PDXDC2P-202ENST00000527016 TRIM26Q12899 539 aaPredicted RBP28.27■■■□□ 2.12
PDXDC2P-202ENST00000527016 ATG3Q9NT62 314 aa28.27■■■□□ 2.12
PDXDC2P-202ENST00000527016 ADCY9O60503 1353 aa28.26■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms