RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 BCL11BQ9C0K0 894 aaPredicted RBP21.96■■□□□ 1.11
SSSCA1-202ENST00000526433 NCAPD2Q15021 1401 aa21.96■■□□□ 1.11
SSSCA1-202ENST00000526433 IL13P35225 146 aa21.95■■□□□ 1.1
SSSCA1-202ENST00000526433 PTF1AQ7RTS3 328 aa21.95■■□□□ 1.1
SSSCA1-202ENST00000526433 TNS1Q9HBL0 1735 aaKnown RBP21.94■■□□□ 1.1
SSSCA1-202ENST00000526433 IGSF1Q8N6C5 1336 aa21.94■■□□□ 1.1
SSSCA1-202ENST00000526433 KCNQ2O43526 872 aa21.93■■□□□ 1.1
SSSCA1-202ENST00000526433 ACSBG1Q96GR2 724 aa21.93■■□□□ 1.1
SSSCA1-202ENST00000526433 EZH2Q15910 746 aaKnown RBP21.92■■□□□ 1.1
SSSCA1-202ENST00000526433 CAMKK2Q96RR4 588 aa21.92■■□□□ 1.1
SSSCA1-202ENST00000526433 DIAPH1O60610 1272 aaKnown RBP21.9■■□□□ 1.1
SSSCA1-202ENST00000526433 PPP2R1AP30153 589 aa21.9■■□□□ 1.1
SSSCA1-202ENST00000526433 SPG7Q9UQ90 795 aa21.9■■□□□ 1.1
SSSCA1-202ENST00000526433 SHANK3Q9BYB0 1731 aa21.89■■□□□ 1.1
SSSCA1-202ENST00000526433 SULT6B1Q6IMI4 303 aa21.89■■□□□ 1.09
SSSCA1-202ENST00000526433 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.89■■□□□ 1.09
SSSCA1-202ENST00000526433 PCDH11XQ9BZA7 1347 aa21.88■■□□□ 1.09
SSSCA1-202ENST00000526433 PCDH11YQ9BZA8 1340 aa21.88■■□□□ 1.09
SSSCA1-202ENST00000526433 CYP27B1O15528 508 aa21.88■■□□□ 1.09
SSSCA1-202ENST00000526433 AEBP1Q8IUX7 1158 aa21.88■■□□□ 1.09
SSSCA1-202ENST00000526433 PLSCR1O15162 318 aa21.87■■□□□ 1.09
SSSCA1-202ENST00000526433 PRIM1P49642 420 aaKnown RBP21.86■■□□□ 1.09
SSSCA1-202ENST00000526433 CFAP53Q96M91 514 aa21.85■■□□□ 1.09
SSSCA1-202ENST00000526433 PARD3Q8TEW0 1356 aa21.85■■□□□ 1.09
SSSCA1-202ENST00000526433 PKD1L3Q7Z443 1732 aa21.84■■□□□ 1.09
SSSCA1-202ENST00000526433 PLEKHO1Q53GL0 409 aaPredicted RBP21.84■■□□□ 1.09
SSSCA1-202ENST00000526433 SYTL4Q96C24 671 aaPredicted RBP21.84■■□□□ 1.09
SSSCA1-202ENST00000526433 NHSQ6T4R5 1651 aa21.84■■□□□ 1.09
SSSCA1-202ENST00000526433 HMOX1P09601 288 aa21.83■■□□□ 1.09
SSSCA1-202ENST00000526433 ZNF316A6NFI3 1004 aaPredicted RBP21.82■■□□□ 1.08
SSSCA1-202ENST00000526433 NKX1-1Q15270 411 aaPredicted RBP21.82■■□□□ 1.08
SSSCA1-202ENST00000526433 IFNL2Q8IZJ0 200 aa21.82■■□□□ 1.08
SSSCA1-202ENST00000526433 KDRP35968 1356 aa21.82■■□□□ 1.08
SSSCA1-202ENST00000526433 COL3A1P02461 1466 aaPredicted RBP21.82■■□□□ 1.08
SSSCA1-202ENST00000526433 U2SURPO15042 1029 aaKnown RBP21.81■■□□□ 1.08
SSSCA1-202ENST00000526433 PHKG2P15735 406 aa21.81■■□□□ 1.08
SSSCA1-202ENST00000526433 AMOTQ4VCS5 1084 aa21.81■■□□□ 1.08
SSSCA1-202ENST00000526433 PROM2Q8N271 834 aa21.81■■□□□ 1.08
SSSCA1-202ENST00000526433 PLEKHG2Q9H7P9 1386 aa21.81■■□□□ 1.08
SSSCA1-202ENST00000526433 BTAF1O14981 1849 aa21.79■■□□□ 1.08
SSSCA1-202ENST00000526433 RALBP1Q15311 655 aa21.79■■□□□ 1.08
SSSCA1-202ENST00000526433 DOT1LQ8TEK3 1739 aa21.78■■□□□ 1.08
SSSCA1-202ENST00000526433 TXNRD1Q16881 649 aa21.78■■□□□ 1.08
SSSCA1-202ENST00000526433 ZNF530Q6P9A1 599 aaPredicted RBP21.78■■□□□ 1.08
SSSCA1-202ENST00000526433 NUDCQ9Y266 331 aa21.78■■□□□ 1.08
SSSCA1-202ENST00000526433 MPRIPQ6WCQ1 1025 aa21.76■■□□□ 1.07
SSSCA1-202ENST00000526433 RREB1Q92766 1687 aa21.75■■□□□ 1.07
SSSCA1-202ENST00000526433 RGPD3A6NKT7 1758 aaPredicted RBP21.75■■□□□ 1.07
SSSCA1-202ENST00000526433 RGPD4Q7Z3J3 1758 aa21.75■■□□□ 1.07
SSSCA1-202ENST00000526433 NBPF14Q5TI25 921 aa21.75■■□□□ 1.07
SSSCA1-202ENST00000526433 PSDA5PKW4 1024 aaPredicted RBP21.74■■□□□ 1.07
SSSCA1-202ENST00000526433 HSP90AB1P08238 724 aaKnown RBP21.74■■□□□ 1.07
SSSCA1-202ENST00000526433 C1orf141Q5JVX7 400 aa21.73■■□□□ 1.07
SSSCA1-202ENST00000526433 ITGB4P16144 1822 aa21.73■■□□□ 1.07
SSSCA1-202ENST00000526433 NUP188Q5SRE5 1749 aa21.72■■□□□ 1.07
SSSCA1-202ENST00000526433 U2AF1L5P0DN76 240 aaPredicted RBP21.72■■□□□ 1.07
SSSCA1-202ENST00000526433 U2AF1Q01081 240 aaKnown RBP eCLIP21.72■■□□□ 1.07
SSSCA1-202ENST00000526433 R3HDM1Q15032 1099 aaKnown RBP21.72■■□□□ 1.07
SSSCA1-202ENST00000526433 DCAF5Q96JK2 942 aa21.72■■□□□ 1.07
SSSCA1-202ENST00000526433 PIGBQ92521 554 aa21.71■■□□□ 1.07
SSSCA1-202ENST00000526433 TOGARAM1Q9Y4F4 1720 aa21.71■■□□□ 1.07
SSSCA1-202ENST00000526433 ERVV-2B6SEH9 535 aa21.7■■□□□ 1.06
SSSCA1-202ENST00000526433 MTHFSDQ2M296 383 aaKnown RBP21.7■■□□□ 1.06
SSSCA1-202ENST00000526433 TMOD3Q9NYL9 352 aa21.7■■□□□ 1.06
SSSCA1-202ENST00000526433 AKAP4Q5JQC9 854 aa21.69■■□□□ 1.06
SSSCA1-202ENST00000526433 RSPH6AQ9H0K4 717 aa21.69■■□□□ 1.06
SSSCA1-202ENST00000526433 LRRC4BQ9NT99 713 aa21.69■■□□□ 1.06
SSSCA1-202ENST00000526433 PRKRIP1Q9H875 184 aaPredicted RBP21.68■■□□□ 1.06
SSSCA1-202ENST00000526433 MYBBP1AQ9BQG0 1328 aaKnown RBP21.68■■□□□ 1.06
SSSCA1-202ENST00000526433 FCHSD2O94868 740 aa21.67■■□□□ 1.06
SSSCA1-202ENST00000526433 PRKAR2BP31323 418 aa21.67■■□□□ 1.06
SSSCA1-202ENST00000526433 SLC27A3Q5K4L6 730 aa21.67■■□□□ 1.06
SSSCA1-202ENST00000526433 KCNQ4P56696 695 aa21.66■■□□□ 1.06
SSSCA1-202ENST00000526433 CABP4P57796 275 aa21.66■■□□□ 1.06
SSSCA1-202ENST00000526433 SMARCC1Q92922 1105 aaPredicted RBP21.66■■□□□ 1.06
SSSCA1-202ENST00000526433 PHACTR3Q96KR7 559 aa21.66■■□□□ 1.06
SSSCA1-202ENST00000526433 ANO8Q9HCE9 1232 aaPredicted RBP21.66■■□□□ 1.06
SSSCA1-202ENST00000526433 KDM6AO15550 1401 aaPredicted RBP21.65■■□□□ 1.06
SSSCA1-202ENST00000526433 LGR6Q9HBX8 967 aa21.65■■□□□ 1.06
SSSCA1-202ENST00000526433 STK32BQ9NY57 414 aa21.65■■□□□ 1.06
SSSCA1-202ENST00000526433 CCNL1Q9UK58 526 aaPredicted RBP21.64■■□□□ 1.05
SSSCA1-202ENST00000526433 ASAP1Q9ULH1 1129 aa21.64■■□□□ 1.05
SSSCA1-202ENST00000526433 LY75O60449 1722 aa21.63■■□□□ 1.05
SSSCA1-202ENST00000526433 SLC15A2Q16348 729 aa21.63■■□□□ 1.05
SSSCA1-202ENST00000526433 GAS2L2Q8NHY3 880 aa21.63■■□□□ 1.05
SSSCA1-202ENST00000526433 PALLDQ8WX93 1383 aa21.62■■□□□ 1.05
SSSCA1-202ENST00000526433 RNMTO43148 476 aaKnown RBP21.62■■□□□ 1.05
SSSCA1-202ENST00000526433 NFATC2IPQ8NCF5 419 aa21.62■■□□□ 1.05
SSSCA1-202ENST00000526433 ATG3Q9NT62 314 aa21.62■■□□□ 1.05
SSSCA1-202ENST00000526433 SCN11AQ9UI33 1791 aa21.61■■□□□ 1.05
SSSCA1-202ENST00000526433 GNAT3A8MTJ3 354 aa21.59■■□□□ 1.05
SSSCA1-202ENST00000526433 ZNF827Q17R98 1081 aa21.58■■□□□ 1.05
SSSCA1-202ENST00000526433 AKT1S1Q96B36 256 aa21.58■■□□□ 1.05
SSSCA1-202ENST00000526433 VIRMAQ69YN4 1812 aaKnown RBP21.57■■□□□ 1.04
SSSCA1-202ENST00000526433 LOC102724428A0A0B4J2F2 783 aa21.57■■□□□ 1.04
SSSCA1-202ENST00000526433 SIK1P57059 783 aa21.57■■□□□ 1.04
SSSCA1-202ENST00000526433 IL17REQ8NFR9 667 aa21.57■■□□□ 1.04
SSSCA1-202ENST00000526433 PNNQ9H307 717 aaKnown RBP21.57■■□□□ 1.04
SSSCA1-202ENST00000526433 SLC52A2Q9HAB3 445 aa21.57■■□□□ 1.04
SSSCA1-202ENST00000526433 PAPPAQ13219 1627 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms