RNA–Protein interactions for RNA: ENST00000525997.1

PUM1-216, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-216ENST00000525997 AXIN2Q9Y2T1 843 aa6.93□□□□□ -1.3
PUM1-216ENST00000525997 RGPD1P0DJD0 1748 aa6.93□□□□□ -1.3
PUM1-216ENST00000525997 NRAPQ86VF7 1730 aa6.93□□□□□ -1.3
PUM1-216ENST00000525997 IL2RBP14784 551 aa6.92□□□□□ -1.3
PUM1-216ENST00000525997 FKBP8Q14318 412 aa6.92□□□□□ -1.3
PUM1-216ENST00000525997 BARGINQ6ZT62 677 aa6.92□□□□□ -1.3
PUM1-216ENST00000525997 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.92□□□□□ -1.34e-10■□□□□ 9.7
PUM1-216ENST00000525997 SPG7Q9UQ90 795 aa6.92□□□□□ -1.3
PUM1-216ENST00000525997 SPATA31A5Q5VU36 1347 aa6.92□□□□□ -1.3
PUM1-216ENST00000525997 SPATA31A7Q8IWB4 1347 aa6.92□□□□□ -1.3
PUM1-216ENST00000525997 RGPD5Q99666 1765 aa6.92□□□□□ -1.3
PUM1-216ENST00000525997 PARP4Q9UKK3 1724 aaKnown RBP6.91□□□□□ -1.3
PUM1-216ENST00000525997 HSP90AB1P08238 724 aaKnown RBP6.91□□□□□ -1.3
PUM1-216ENST00000525997 PRKAR2BP31323 418 aa6.91□□□□□ -1.3
PUM1-216ENST00000525997 CALD1Q05682 793 aaKnown RBP6.91□□□□□ -1.3
PUM1-216ENST00000525997 NBPF6Q5VWK0 638 aa6.91□□□□□ -1.3
PUM1-216ENST00000525997 LARP1Q6PKG0 1096 aaKnown RBP6.91□□□□□ -1.3
PUM1-216ENST00000525997 NBPF4Q96M43 638 aa6.91□□□□□ -1.3
PUM1-216ENST00000525997 RSPH6AQ9H0K4 717 aa6.91□□□□□ -1.3
PUM1-216ENST00000525997 ADAMTS8Q9UP79 889 aa6.91□□□□□ -1.3
PUM1-216ENST00000525997 SPATA31A1Q5TZJ5 1347 aa6.91□□□□□ -1.3
PUM1-216ENST00000525997 ATRNO75882 1429 aa6.91□□□□□ -1.3
PUM1-216ENST00000525997 BCL9LQ86UU0 1499 aa6.91□□□□□ -1.3
PUM1-216ENST00000525997 A0A0G2JS52 829 aa6.9□□□□□ -1.3
PUM1-216ENST00000525997 HMOX1P09601 288 aa6.9□□□□□ -1.3
PUM1-216ENST00000525997 MYT1Q01538 1121 aa6.9□□□□□ -1.3
PUM1-216ENST00000525997 C1orf141Q5JVX7 400 aa6.9□□□□□ -1.3
PUM1-216ENST00000525997 RTF1Q92541 710 aaKnown RBP6.9□□□□□ -1.3
PUM1-216ENST00000525997 GJD4Q96KN9 370 aaPredicted RBP6.9□□□□□ -1.3
PUM1-216ENST00000525997 QTRT2Q9H974 415 aaKnown RBP6.9□□□□□ -1.3
PUM1-216ENST00000525997 PCDH11XQ9BZA7 1347 aa6.9□□□□□ -1.3
PUM1-216ENST00000525997 PCDH11YQ9BZA8 1340 aa6.9□□□□□ -1.3
PUM1-216ENST00000525997 EXOC5O00471 708 aa6.89□□□□□ -1.31
PUM1-216ENST00000525997 HTATSF1O43719 755 aaKnown RBP6.89□□□□□ -1.31
PUM1-216ENST00000525997 RXRBP28702 533 aa6.89□□□□□ -1.31
PUM1-216ENST00000525997 RBM6P78332 1123 aaKnown RBP6.89□□□□□ -1.31
PUM1-216ENST00000525997 CCDC184Q52MB2 194 aa6.89□□□□□ -1.31
PUM1-216ENST00000525997 POTEAQ6S8J7 498 aa6.89□□□□□ -1.31
PUM1-216ENST00000525997 USHBP1Q8N6Y0 703 aa6.89□□□□□ -1.31
PUM1-216ENST00000525997 SPINK5Q9NQ38 1064 aaPredicted RBP6.89□□□□□ -1.31
PUM1-216ENST00000525997 USP35Q9P2H5 1018 aa6.89□□□□□ -1.31
PUM1-216ENST00000525997 OVOS2A0A0G2JMS6 1433 aa6.89□□□□□ -1.31
PUM1-216ENST00000525997 WNK3Q9BYP7 1800 aa6.88□□□□□ -1.31
PUM1-216ENST00000525997 TNS2Q63HR2 1409 aa6.88□□□□□ -1.31
PUM1-216ENST00000525997 NFE2L2Q16236 605 aa6.88□□□□□ -1.31
PUM1-216ENST00000525997 DDB1Q16531 1140 aa6.88□□□□□ -1.31
PUM1-216ENST00000525997 CCDC27Q2M243 656 aa6.88□□□□□ -1.31
PUM1-216ENST00000525997 AKAP4Q5JQC9 854 aa6.88□□□□□ -1.31
PUM1-216ENST00000525997 AEBP1Q8IUX7 1158 aa6.88□□□□□ -1.31
PUM1-216ENST00000525997 IFNL2Q8IZJ0 200 aa6.88□□□□□ -1.31
PUM1-216ENST00000525997 ZCRB1Q8TBF4 217 aaKnown RBP6.88□□□□□ -1.31
PUM1-216ENST00000525997 RGPD2P0DJD1 1756 aa6.87□□□□□ -1.31
PUM1-216ENST00000525997 PKD1L3Q7Z443 1732 aa6.87□□□□□ -1.31
PUM1-216ENST00000525997 MEGF6O75095 1541 aa6.87□□□□□ -1.31
PUM1-216ENST00000525997 DISP2A7MBM2 1401 aa6.87□□□□□ -1.31
PUM1-216ENST00000525997 MAP3K5Q99683 1374 aa6.87□□□□□ -1.31
PUM1-216ENST00000525997 GNAT3A8MTJ3 354 aa6.87□□□□□ -1.31
PUM1-216ENST00000525997 ATXN8OSP0DMR3 200 aa6.87□□□□□ -1.31
PUM1-216ENST00000525997 TMPOP42166 694 aaKnown RBP6.87□□□□□ -1.31
PUM1-216ENST00000525997 HNRNPUQ00839 825 aaKnown RBP eCLIP6.87□□□□□ -1.31
PUM1-216ENST00000525997 PDE3BQ13370 1112 aa6.87□□□□□ -1.31
PUM1-216ENST00000525997 FAM98CQ17RN3 349 aaKnown RBP6.87□□□□□ -1.31
PUM1-216ENST00000525997 ZNF530Q6P9A1 599 aaPredicted RBP6.87□□□□□ -1.31
PUM1-216ENST00000525997 CCDC146Q8IYE0 955 aa6.87□□□□□ -1.31
PUM1-216ENST00000525997 PLEKHF1Q96S99 279 aa6.87□□□□□ -1.31
PUM1-216ENST00000525997 APAF1O14727 1248 aa6.86□□□□□ -1.31
PUM1-216ENST00000525997 ONECUT3O60422 494 aaPredicted RBP6.86□□□□□ -1.31
PUM1-216ENST00000525997 CAPN15O75808 1086 aa6.86□□□□□ -1.31
PUM1-216ENST00000525997 HMGB2P26583 209 aaKnown RBP6.86□□□□□ -1.31
PUM1-216ENST00000525997 RIPK4P57078 832 aa6.86□□□□□ -1.31
PUM1-216ENST00000525997 UPF1Q92900 1129 aaKnown RBP eCLIP6.86□□□□□ -1.31
PUM1-216ENST00000525997 DCAF5Q96JK2 942 aa6.86□□□□□ -1.31
PUM1-216ENST00000525997 GLI3P10071 1580 aa6.86□□□□□ -1.31
PUM1-216ENST00000525997 ZBED9Q6R2W3 1325 aa6.85□□□□□ -1.31
PUM1-216ENST00000525997 THSD7AQ9UPZ6 1657 aa6.85□□□□□ -1.31
PUM1-216ENST00000525997 TEFQ10587 303 aa6.85□□□□□ -1.31
PUM1-216ENST00000525997 MTHFSDQ2M296 383 aaKnown RBP6.85□□□□□ -1.31
PUM1-216ENST00000525997 WDR63Q8IWG1 891 aa6.85□□□□□ -1.31
PUM1-216ENST00000525997 LRRC37A3O60309 1634 aa6.84□□□□□ -1.31
PUM1-216ENST00000525997 IL16Q14005 1332 aa6.84□□□□□ -1.31
PUM1-216ENST00000525997 MYCNP04198 464 aaPredicted RBP6.84□□□□□ -1.31
PUM1-216ENST00000525997 PHKG2P15735 406 aa6.84□□□□□ -1.31
PUM1-216ENST00000525997 NKX1-1Q15270 411 aaPredicted RBP6.84□□□□□ -1.31
PUM1-216ENST00000525997 NEUROD2Q15784 382 aa6.84□□□□□ -1.31
PUM1-216ENST00000525997 SEPT12Q8IYM1 358 aa6.84□□□□□ -1.31
PUM1-216ENST00000525997 DDX54Q8TDD1 881 aaKnown RBP6.84□□□□□ -1.31
PUM1-216ENST00000525997 PHACTR3Q96KR7 559 aa6.84□□□□□ -1.31
PUM1-216ENST00000525997 CHMP4AQ9BY43 222 aa6.84□□□□□ -1.31
PUM1-216ENST00000525997 MYH16Q9H6N6 1097 aa6.84□□□□□ -1.31
PUM1-216ENST00000525997 BABAM1Q9NWV8 329 aa6.84□□□□□ -1.31
PUM1-216ENST00000525997 BCL9O00512 1426 aa6.84□□□□□ -1.32
PUM1-216ENST00000525997 ERVV-2B6SEH9 535 aa6.83□□□□□ -1.32
PUM1-216ENST00000525997 GNAI1P63096 354 aa6.83□□□□□ -1.32
PUM1-216ENST00000525997 GOLGA2Q08379 1002 aa6.83□□□□□ -1.32
PUM1-216ENST00000525997 FAM196AQ6ZSG2 479 aa6.83□□□□□ -1.32
PUM1-216ENST00000525997 KRT27Q7Z3Y8 459 aa6.83□□□□□ -1.32
PUM1-216ENST00000525997 RGS12O14924 1447 aa6.83□□□□□ -1.32
PUM1-216ENST00000525997 E9PSI1 815 aa6.82□□□□□ -1.32
PUM1-216ENST00000525997 CYP27B1O15528 508 aa6.82□□□□□ -1.32
PUM1-216ENST00000525997 RNMTO43148 476 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms