RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 SHANK3Q9BYB0 1731 aa16.27■□□□□ 0.2
CDC27-202ENST00000525495 PTF1AQ7RTS3 328 aa16.27■□□□□ 0.19
CDC27-202ENST00000525495 BCL9O00512 1426 aa16.27■□□□□ 0.19
CDC27-202ENST00000525495 APBA3O96018 575 aa16.25■□□□□ 0.19
CDC27-202ENST00000525495 EZH2Q15910 746 aaKnown RBP16.24■□□□□ 0.19
CDC27-202ENST00000525495 MORC1Q86VD1 984 aa16.24■□□□□ 0.19
CDC27-202ENST00000525495 CAMKK2Q96RR4 588 aa16.23■□□□□ 0.19
CDC27-202ENST00000525495 NCAPD2Q15021 1401 aa16.23■□□□□ 0.19
CDC27-202ENST00000525495 RREB1Q92766 1687 aa16.23■□□□□ 0.19
CDC27-202ENST00000525495 NHSQ6T4R5 1651 aa16.22■□□□□ 0.19
CDC27-202ENST00000525495 KCNQ2O43526 872 aa16.21■□□□□ 0.19
CDC27-202ENST00000525495 EIF4A2Q14240 407 aaKnown RBP16.21■□□□□ 0.19
CDC27-202ENST00000525495 CC2D1BQ5T0F9 858 aaKnown RBP16.21■□□□□ 0.19
CDC27-202ENST00000525495 DDX54Q8TDD1 881 aaKnown RBP16.21■□□□□ 0.19
CDC27-202ENST00000525495 EYA1Q99502 592 aa16.21■□□□□ 0.19
CDC27-202ENST00000525495 BCL11BQ9C0K0 894 aaPredicted RBP16.21■□□□□ 0.19
CDC27-202ENST00000525495 NUP188Q5SRE5 1749 aa16.2■□□□□ 0.18
CDC27-202ENST00000525495 RGPD3A6NKT7 1758 aaPredicted RBP16.2■□□□□ 0.18
CDC27-202ENST00000525495 RGPD4Q7Z3J3 1758 aa16.2■□□□□ 0.18
CDC27-202ENST00000525495 ACSBG1Q96GR2 724 aa16.2■□□□□ 0.18
CDC27-202ENST00000525495 KAT6BQ8WYB5 2073 aa16.19■□□□□ 0.18
CDC27-202ENST00000525495 ZCRB1Q8TBF4 217 aaKnown RBP16.19■□□□□ 0.18
CDC27-202ENST00000525495 RAPGEF4Q8WZA2 1011 aa16.19■□□□□ 0.18
CDC27-202ENST00000525495 PKD1L3Q7Z443 1732 aa16.18■□□□□ 0.18
CDC27-202ENST00000525495 PARD3Q8TEW0 1356 aa16.18■□□□□ 0.18
CDC27-202ENST00000525495 SRCAPQ6ZRS2 3230 aa16.18■□□□□ 0.18
CDC27-202ENST00000525495 DOT1LQ8TEK3 1739 aa16.18■□□□□ 0.18
CDC27-202ENST00000525495 NPC1L1Q9UHC9 1359 aa16.18■□□□□ 0.18
CDC27-202ENST00000525495 TATP17735 454 aaPredicted RBP16.17■□□□□ 0.18
CDC27-202ENST00000525495 CNGB1Q14028 1251 aaPredicted RBP16.17■□□□□ 0.18
CDC27-202ENST00000525495 BTAF1O14981 1849 aa16.17■□□□□ 0.18
CDC27-202ENST00000525495 PLSCR1O15162 318 aa16.16■□□□□ 0.18
CDC27-202ENST00000525495 PSDA5PKW4 1024 aaPredicted RBP16.15■□□□□ 0.18
CDC27-202ENST00000525495 IGSF1Q8N6C5 1336 aa16.15■□□□□ 0.18
CDC27-202ENST00000525495 MTHFSP49914 203 aa16.14■□□□□ 0.17
CDC27-202ENST00000525495 PROM2Q8N271 834 aa16.14■□□□□ 0.17
CDC27-202ENST00000525495 CYP27B1O15528 508 aa16.13■□□□□ 0.17
CDC27-202ENST00000525495 TOGARAM1Q9Y4F4 1720 aa16.13■□□□□ 0.17
CDC27-202ENST00000525495 PCDH11XQ9BZA7 1347 aa16.12■□□□□ 0.17
CDC27-202ENST00000525495 PCDH11YQ9BZA8 1340 aa16.12■□□□□ 0.17
CDC27-202ENST00000525495 IL13P35225 146 aa16.11■□□□□ 0.17
CDC27-202ENST00000525495 PRIM1P49642 420 aaKnown RBP16.11■□□□□ 0.17
CDC27-202ENST00000525495 R3HDM1Q15032 1099 aaKnown RBP16.11■□□□□ 0.17
CDC27-202ENST00000525495 AEBP1Q8IUX7 1158 aa16.1■□□□□ 0.17
CDC27-202ENST00000525495 TXNRD1Q16881 649 aa16.1■□□□□ 0.17
CDC27-202ENST00000525495 SYTL4Q96C24 671 aaPredicted RBP16.1■□□□□ 0.17
CDC27-202ENST00000525495 ITGB4P16144 1822 aa16.09■□□□□ 0.17
CDC27-202ENST00000525495 COL3A1P02461 1466 aaPredicted RBP16.09■□□□□ 0.17
CDC27-202ENST00000525495 ANO8Q9HCE9 1232 aaPredicted RBP16.09■□□□□ 0.17
CDC27-202ENST00000525495 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.08■□□□□ 0.162e-7■■■■□ 23.7
CDC27-202ENST00000525495 SPG7Q9UQ90 795 aa16.08■□□□□ 0.16
CDC27-202ENST00000525495 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
CDC27-202ENST00000525495 KDRP35968 1356 aa16.07■□□□□ 0.16
CDC27-202ENST00000525495 SULT6B1Q6IMI4 303 aa16.07■□□□□ 0.16
CDC27-202ENST00000525495 LY75O60449 1722 aa16.07■□□□□ 0.16
CDC27-202ENST00000525495 PLEKHG2Q9H7P9 1386 aa16.06■□□□□ 0.16
CDC27-202ENST00000525495 NKX1-1Q15270 411 aaPredicted RBP16.06■□□□□ 0.16
CDC27-202ENST00000525495 NBPF14Q5TI25 921 aa16.06■□□□□ 0.16
CDC27-202ENST00000525495 PAPPAQ13219 1627 aa16.06■□□□□ 0.16
CDC27-202ENST00000525495 PHKG2P15735 406 aa16.05■□□□□ 0.16
CDC27-202ENST00000525495 DIAPH1O60610 1272 aaKnown RBP16.04■□□□□ 0.16
CDC27-202ENST00000525495 LRRC4BQ9NT99 713 aa16.04■□□□□ 0.16
CDC27-202ENST00000525495 IFNL2Q8IZJ0 200 aa16.03■□□□□ 0.16
CDC27-202ENST00000525495 LRP5O75197 1615 aa16.03■□□□□ 0.16
CDC27-202ENST00000525495 HMOX1P09601 288 aa16.03■□□□□ 0.16
CDC27-202ENST00000525495 PPP2R1AP30153 589 aa16.03■□□□□ 0.16
CDC27-202ENST00000525495 KCNQ4P56696 695 aa16.03■□□□□ 0.16
CDC27-202ENST00000525495 MPRIPQ6WCQ1 1025 aa16.03■□□□□ 0.16
CDC27-202ENST00000525495 PLEKHO1Q53GL0 409 aaPredicted RBP16.02■□□□□ 0.15
CDC27-202ENST00000525495 CASZ1Q86V15 1759 aa16.01■□□□□ 0.15
CDC27-202ENST00000525495 DDX10Q13206 875 aaKnown RBP16.01■□□□□ 0.15
CDC27-202ENST00000525495 AMOTQ4VCS5 1084 aa16.01■□□□□ 0.15
CDC27-202ENST00000525495 ZEB1P37275 1124 aaPredicted RBP16■□□□□ 0.15
CDC27-202ENST00000525495 ZNF530Q6P9A1 599 aaPredicted RBP16■□□□□ 0.15
CDC27-202ENST00000525495 PIGBQ92521 554 aa16■□□□□ 0.15
CDC27-202ENST00000525495 PDGFDQ9GZP0 370 aaPredicted RBP16■□□□□ 0.15
CDC27-202ENST00000525495 KDM6AO15550 1401 aaPredicted RBP15.99■□□□□ 0.15
CDC27-202ENST00000525495 SLC15A2Q16348 729 aa15.99■□□□□ 0.15
CDC27-202ENST00000525495 ZNF827Q17R98 1081 aa15.98■□□□□ 0.15
CDC27-202ENST00000525495 SLC27A3Q5K4L6 730 aa15.98■□□□□ 0.15
CDC27-202ENST00000525495 STK32BQ9NY57 414 aa15.98■□□□□ 0.15
CDC27-202ENST00000525495 PALLDQ8WX93 1383 aa15.97■□□□□ 0.15
CDC27-202ENST00000525495 U2SURPO15042 1029 aaKnown RBP15.97■□□□□ 0.15
CDC27-202ENST00000525495 TUBGCP6Q96RT7 1819 aa15.97■□□□□ 0.15
CDC27-202ENST00000525495 SCN11AQ9UI33 1791 aa15.97■□□□□ 0.15
CDC27-202ENST00000525495 VIRMAQ69YN4 1812 aaKnown RBP15.97■□□□□ 0.15
CDC27-202ENST00000525495 TAF1LQ8IZX4 1826 aa15.97■□□□□ 0.15
CDC27-202ENST00000525495 DCAF5Q96JK2 942 aa15.97■□□□□ 0.15
CDC27-202ENST00000525495 TMOD3Q9NYL9 352 aa15.97■□□□□ 0.15
CDC27-202ENST00000525495 CCNL1Q9UK58 526 aaPredicted RBP15.97■□□□□ 0.15
CDC27-202ENST00000525495 C5P01031 1676 aa15.96■□□□□ 0.15
CDC27-202ENST00000525495 AKT1S1Q96B36 256 aa15.96■□□□□ 0.14
CDC27-202ENST00000525495 CFAP53Q96M91 514 aa15.96■□□□□ 0.14
CDC27-202ENST00000525495 ASAP1Q9ULH1 1129 aa15.96■□□□□ 0.14
CDC27-202ENST00000525495 HSP90AB1P08238 724 aaKnown RBP15.95■□□□□ 0.14
CDC27-202ENST00000525495 MTHFSDQ2M296 383 aaKnown RBP15.95■□□□□ 0.14
CDC27-202ENST00000525495 C1orf141Q5JVX7 400 aa15.95■□□□□ 0.14
CDC27-202ENST00000525495 QSER1Q2KHR3 1735 aa15.94■□□□□ 0.14
CDC27-202ENST00000525495 ERVV-2B6SEH9 535 aa15.94■□□□□ 0.14
CDC27-202ENST00000525495 SMARCC1Q92922 1105 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms