RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 DEFB132Q7Z7B7 95 aa11.71□□□□□ -0.53
NEDD8-203ENST00000524927 ZNF784Q8NCA9 323 aaPredicted RBP11.71□□□□□ -0.53
NEDD8-203ENST00000524927 RBM46Q8TBY0 533 aaKnown RBP11.71□□□□□ -0.53
NEDD8-203ENST00000524927 PHOX2BQ99453 314 aa11.71□□□□□ -0.53
NEDD8-203ENST00000524927 PREX2Q70Z35 1606 aa11.71□□□□□ -0.54
NEDD8-203ENST00000524927 NKTRP30414 1462 aaKnown RBP11.7□□□□□ -0.54
NEDD8-203ENST00000524927 CLIP1P30622 1438 aa11.7□□□□□ -0.54
NEDD8-203ENST00000524927 CEP350Q5VT06 3117 aa11.7□□□□□ -0.54
NEDD8-203ENST00000524927 POTECB2RU33 542 aa11.7□□□□□ -0.54
NEDD8-203ENST00000524927 CFHP08603 1231 aa11.7□□□□□ -0.54
NEDD8-203ENST00000524927 MS4A1P11836 297 aa11.7□□□□□ -0.54
NEDD8-203ENST00000524927 LTKP29376 864 aa11.7□□□□□ -0.54
NEDD8-203ENST00000524927 PLA2G2CQ5R387 149 aa11.7□□□□□ -0.54
NEDD8-203ENST00000524927 METTL3Q86U44 580 aaKnown RBP11.7□□□□□ -0.54
NEDD8-203ENST00000524927 TXNDC2Q86VQ3 553 aa11.7□□□□□ -0.54
NEDD8-203ENST00000524927 ZNF775Q96BV0 537 aaPredicted RBP11.7□□□□□ -0.54
NEDD8-203ENST00000524927 TRPC5Q9UL62 973 aaPredicted RBP11.7□□□□□ -0.54
NEDD8-203ENST00000524927 PRR14Q9BWN1 585 aa11.69□□□□□ -0.54
NEDD8-203ENST00000524927 ARHGAP23Q9P227 1491 aa11.69□□□□□ -0.54
NEDD8-203ENST00000524927 INO80Q9ULG1 1556 aaPredicted RBP11.68□□□□□ -0.54
NEDD8-203ENST00000524927 SLC4A3P48751 1232 aa11.68□□□□□ -0.54
NEDD8-203ENST00000524927 SF3B2Q13435 895 aaKnown RBP11.68□□□□□ -0.54
NEDD8-203ENST00000524927 SLIT1O75093 1534 aa11.68□□□□□ -0.54
NEDD8-203ENST00000524927 SSTR3P32745 418 aaPredicted RBP11.67□□□□□ -0.54
NEDD8-203ENST00000524927 MYT1Q01538 1121 aa11.67□□□□□ -0.54
NEDD8-203ENST00000524927 ANKLE1Q8NAG6 615 aa11.67□□□□□ -0.54
NEDD8-203ENST00000524927 PXYLP1Q8TE99 480 aa11.67□□□□□ -0.54
NEDD8-203ENST00000524927 NLRP7Q8WX94 980 aa11.67□□□□□ -0.54
NEDD8-203ENST00000524927 NCOA2Q15596 1464 aa11.67□□□□□ -0.54
NEDD8-203ENST00000524927 WASHC2CQ9Y4E1 1318 aa11.66□□□□□ -0.54
NEDD8-203ENST00000524927 ADGBQ8N7X0 1667 aa11.66□□□□□ -0.54
NEDD8-203ENST00000524927 ZNF598Q86UK7 904 aaKnown RBP11.66□□□□□ -0.54
NEDD8-203ENST00000524927 EID1Q9Y6B2 187 aa11.66□□□□□ -0.54
NEDD8-203ENST00000524927 KDM5AP29375 1690 aaKnown RBP11.65□□□□□ -0.54
NEDD8-203ENST00000524927 SETD5Q9C0A6 1442 aa11.65□□□□□ -0.54
NEDD8-203ENST00000524927 GDF9O60383 454 aa11.64□□□□□ -0.55
NEDD8-203ENST00000524927 PUS10Q3MIT2 529 aaKnown RBP11.64□□□□□ -0.55
NEDD8-203ENST00000524927 KMT5BQ4FZB7 885 aa11.64□□□□□ -0.55
NEDD8-203ENST00000524927 USP21Q9UK80 565 aa11.64□□□□□ -0.55
NEDD8-203ENST00000524927 UBR1Q8IWV7 1749 aa11.63□□□□□ -0.55
NEDD8-203ENST00000524927 ATRNO75882 1429 aa11.63□□□□□ -0.55
NEDD8-203ENST00000524927 SCUBE3Q8IX30 993 aa11.63□□□□□ -0.55
NEDD8-203ENST00000524927 SYCP2Q9BX26 1530 aa11.63□□□□□ -0.55
NEDD8-203ENST00000524927 NCOA3Q9Y6Q9 1424 aa11.62□□□□□ -0.55
NEDD8-203ENST00000524927 TNFRSF10AO00220 468 aa11.62□□□□□ -0.55
NEDD8-203ENST00000524927 ADH1BP00325 375 aa11.62□□□□□ -0.55
NEDD8-203ENST00000524927 ZNF697Q5TEC3 545 aa11.62□□□□□ -0.55
NEDD8-203ENST00000524927 HNRNPMP52272 730 aaKnown RBP eCLIP11.61□□□□□ -0.55
NEDD8-203ENST00000524927 PRR20EP86478 221 aa11.61□□□□□ -0.55
NEDD8-203ENST00000524927 PRR20CP86479 221 aa11.61□□□□□ -0.55
NEDD8-203ENST00000524927 PRR20DP86480 221 aa11.61□□□□□ -0.55
NEDD8-203ENST00000524927 PRR20BP86481 221 aa11.61□□□□□ -0.55
NEDD8-203ENST00000524927 PRR20AP86496 221 aa11.61□□□□□ -0.55
NEDD8-203ENST00000524927 FNBP4Q8N3X1 1017 aaPredicted RBP11.61□□□□□ -0.55
NEDD8-203ENST00000524927 LRRC59Q96AG4 307 aaKnown RBP11.61□□□□□ -0.55
NEDD8-203ENST00000524927 PCMTD1Q96MG8 357 aaPredicted RBP11.61□□□□□ -0.55
NEDD8-203ENST00000524927 BEGAINQ9BUH8 593 aa11.61□□□□□ -0.55
NEDD8-203ENST00000524927 FAM217BQ9NTX9 383 aaPredicted RBP11.61□□□□□ -0.55
NEDD8-203ENST00000524927 DHX29Q7Z478 1369 aaKnown RBP11.61□□□□□ -0.55
NEDD8-203ENST00000524927 UNC13BO14795 1591 aa11.61□□□□□ -0.55
NEDD8-203ENST00000524927 KIAA1107Q9UPP5 1409 aa11.6□□□□□ -0.55
NEDD8-203ENST00000524927 GOPCQ9HD26 462 aa11.6□□□□□ -0.55
NEDD8-203ENST00000524927 ATP1B4Q9UN42 357 aaPredicted RBP11.6□□□□□ -0.55
NEDD8-203ENST00000524927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.59□□□□□ -0.55
NEDD8-203ENST00000524927 RTEL1-TNFRSF6BF6WH68 1400 aa11.59□□□□□ -0.55
NEDD8-203ENST00000524927 KIF3BO15066 747 aa11.58□□□□□ -0.56
NEDD8-203ENST00000524927 DGAT1O75907 488 aa11.58□□□□□ -0.56
NEDD8-203ENST00000524927 PKDCCQ504Y2 493 aa11.58□□□□□ -0.56
NEDD8-203ENST00000524927 BRINP3Q76B58 766 aa11.58□□□□□ -0.56
NEDD8-203ENST00000524927 SLC6A16Q9GZN6 736 aa11.58□□□□□ -0.56
NEDD8-203ENST00000524927 RSPH6AQ9H0K4 717 aa11.58□□□□□ -0.56
NEDD8-203ENST00000524927 MROH1Q8NDA8 1641 aa11.57□□□□□ -0.56
NEDD8-203ENST00000524927 PNPLA6Q8IY17 1366 aa11.57□□□□□ -0.56
NEDD8-203ENST00000524927 TET3O43151 1660 aa11.57□□□□□ -0.56
NEDD8-203ENST00000524927 ADAMTS2O95450 1211 aa11.57□□□□□ -0.56
NEDD8-203ENST00000524927 RANGAP1P46060 587 aaPredicted RBP11.57□□□□□ -0.56
NEDD8-203ENST00000524927 R3HDM1Q15032 1099 aaKnown RBP11.57□□□□□ -0.56
NEDD8-203ENST00000524927 ZNF777Q9ULD5 760 aaPredicted RBP11.57□□□□□ -0.56
NEDD8-203ENST00000524927 ERVK-7P63135 1459 aa11.57□□□□□ -0.56
NEDD8-203ENST00000524927 PLEKHH2Q8IVE3 1493 aa11.57□□□□□ -0.56
NEDD8-203ENST00000524927 NR1I2O75469 434 aa11.56□□□□□ -0.56
NEDD8-203ENST00000524927 BAG6P46379 1132 aa11.56□□□□□ -0.56
NEDD8-203ENST00000524927 SLC26A8Q96RN1 970 aa11.56□□□□□ -0.56
NEDD8-203ENST00000524927 PKD2L1Q9P0L9 805 aa11.56□□□□□ -0.56
NEDD8-203ENST00000524927 MAST1Q9Y2H9 1570 aa11.56□□□□□ -0.56
NEDD8-203ENST00000524927 TMEM2Q9UHN6 1383 aa11.55□□□□□ -0.56
NEDD8-203ENST00000524927 NINLQ9Y2I6 1382 aa11.55□□□□□ -0.56
NEDD8-203ENST00000524927 FAM187AA6NFU0 413 aa11.55□□□□□ -0.56
NEDD8-203ENST00000524927 ST8SIA5O15466 376 aa11.55□□□□□ -0.56
NEDD8-203ENST00000524927 ATF3P18847 181 aa11.55□□□□□ -0.56
NEDD8-203ENST00000524927 SH3D19Q5HYK7 790 aa11.55□□□□□ -0.56
NEDD8-203ENST00000524927 CDC42BPAQ5VT25 1732 aa11.55□□□□□ -0.56
NEDD8-203ENST00000524927 C19orf44Q9H6X5 657 aa11.54□□□□□ -0.56
NEDD8-203ENST00000524927 CAMSAP2Q08AD1 1489 aa11.54□□□□□ -0.56
NEDD8-203ENST00000524927 GPATCH8Q9UKJ3 1502 aaKnown RBP11.54□□□□□ -0.56
NEDD8-203ENST00000524927 ARHGAP35Q9NRY4 1499 aa11.53□□□□□ -0.56
NEDD8-203ENST00000524927 SPHKAPQ2M3C7 1700 aa11.53□□□□□ -0.56
NEDD8-203ENST00000524927 GJD4Q96KN9 370 aaPredicted RBP11.53□□□□□ -0.56
NEDD8-203ENST00000524927 SPSB2Q99619 263 aa11.53□□□□□ -0.56
NEDD8-203ENST00000524927 PTCH1Q13635 1447 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms