RNA–Protein interactions for RNA: ENST00000524630.5

CTNND1-210, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTNND1, Length 6,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-210ENST00000524630 CUL7Q14999 1698 aa11.95□□□□□ -0.5
CTNND1-210ENST00000524630 CCDC183Q5T5S1 534 aa11.95□□□□□ -0.5
CTNND1-210ENST00000524630 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.95□□□□□ -0.51e-7■■■□□ 16.3
CTNND1-210ENST00000524630 IL1RAPL2Q9NP60 686 aa11.95□□□□□ -0.5
CTNND1-210ENST00000524630 CCDC69A6NI79 296 aa11.95□□□□□ -0.5
CTNND1-210ENST00000524630 CCDC181Q5TID7 509 aa11.95□□□□□ -0.5
CTNND1-210ENST00000524630 TMCO3Q6UWJ1 677 aa11.95□□□□□ -0.5
CTNND1-210ENST00000524630 NUTM1Q86Y26 1132 aa11.95□□□□□ -0.5
CTNND1-210ENST00000524630 ZNHIT6Q9NWK9 470 aaKnown RBP11.94□□□□□ -0.5
CTNND1-210ENST00000524630 PPP6R1Q9UPN7 881 aa11.94□□□□□ -0.5
CTNND1-210ENST00000524630 LRPPRCP42704 1394 aaKnown RBP11.94□□□□□ -0.5
CTNND1-210ENST00000524630 PTPN14Q15678 1187 aa11.94□□□□□ -0.5
CTNND1-210ENST00000524630 TXNDC2Q86VQ3 553 aa11.94□□□□□ -0.5
CTNND1-210ENST00000524630 SRGAP3O43295 1099 aa11.94□□□□□ -0.5
CTNND1-210ENST00000524630 NFE2L2Q16236 605 aa11.94□□□□□ -0.5
CTNND1-210ENST00000524630 CENPHQ9H3R5 247 aa11.94□□□□□ -0.5
CTNND1-210ENST00000524630 TOPBP1Q92547 1522 aa11.94□□□□□ -0.5
CTNND1-210ENST00000524630 RTEL1-TNFRSF6BF6WH68 1400 aa11.94□□□□□ -0.5
CTNND1-210ENST00000524630 USP8P40818 1118 aa11.94□□□□□ -0.5
CTNND1-210ENST00000524630 RRS1Q15050 365 aaKnown RBP11.94□□□□□ -0.5
CTNND1-210ENST00000524630 SAMD1Q6SPF0 538 aaPredicted RBP11.94□□□□□ -0.5
CTNND1-210ENST00000524630 RPAP2Q8IXW5 612 aaPredicted RBP11.94□□□□□ -0.5
CTNND1-210ENST00000524630 UPF3BQ9BZI7 483 aaKnown RBP11.94□□□□□ -0.5
CTNND1-210ENST00000524630 CNNM1Q9NRU3 951 aa11.94□□□□□ -0.5
CTNND1-210ENST00000524630 FCHSD2O94868 740 aa11.93□□□□□ -0.5
CTNND1-210ENST00000524630 CEP57L1Q8IYX8 460 aa11.93□□□□□ -0.5
CTNND1-210ENST00000524630 UBXN4Q92575 508 aa11.93□□□□□ -0.5
CTNND1-210ENST00000524630 CASQ1P31415 396 aa11.93□□□□□ -0.5
CTNND1-210ENST00000524630 CCDC83Q8IWF9 413 aa11.93□□□□□ -0.5
CTNND1-210ENST00000524630 FAM135AQ9P2D6 1515 aa11.93□□□□□ -0.5
CTNND1-210ENST00000524630 ERLIN2O94905 339 aa11.93□□□□□ -0.5
CTNND1-210ENST00000524630 SLC3A2P08195 630 aaKnown RBP11.93□□□□□ -0.5
CTNND1-210ENST00000524630 MYL6BP14649 208 aa11.93□□□□□ -0.5
CTNND1-210ENST00000524630 ZFYVE27Q5T4F4 411 aa11.93□□□□□ -0.5
CTNND1-210ENST00000524630 TRERF1Q96PN7 1200 aa11.93□□□□□ -0.5
CTNND1-210ENST00000524630 CALCOCO1Q9P1Z2 691 aa11.93□□□□□ -0.5
CTNND1-210ENST00000524630 DNMBPQ6XZF7 1577 aa11.92□□□□□ -0.5
CTNND1-210ENST00000524630 KIF14Q15058 1648 aa11.92□□□□□ -0.5
CTNND1-210ENST00000524630 CCDC141Q6ZP82 1450 aa11.92□□□□□ -0.5
CTNND1-210ENST00000524630 FAM177BA6PVY3 158 aa11.92□□□□□ -0.5
CTNND1-210ENST00000524630 SMTNL1A8MU46 457 aa11.92□□□□□ -0.5
CTNND1-210ENST00000524630 CYB5RLQ6IPT4 315 aa11.92□□□□□ -0.5
CTNND1-210ENST00000524630 DYNC1I1O14576 645 aa11.92□□□□□ -0.5
CTNND1-210ENST00000524630 POLR3GO15318 223 aaPredicted RBP11.92□□□□□ -0.5
CTNND1-210ENST00000524630 PLEKHH1Q9ULM0 1364 aa11.91□□□□□ -0.5
CTNND1-210ENST00000524630 ATF3P18847 181 aa11.91□□□□□ -0.5
CTNND1-210ENST00000524630 TRIM22Q8IYM9 498 aa11.91□□□□□ -0.5
CTNND1-210ENST00000524630 ZNF692Q9BU19 519 aaPredicted RBP11.91□□□□□ -0.5
CTNND1-210ENST00000524630 EXOC6BQ9Y2D4 811 aa11.91□□□□□ -0.5
CTNND1-210ENST00000524630 ALDH1L2Q3SY69 923 aa11.91□□□□□ -0.5
CTNND1-210ENST00000524630 TNNT1P13805 278 aa11.91□□□□□ -0.5
CTNND1-210ENST00000524630 FAM69CQ0P6D2 419 aa11.91□□□□□ -0.5
CTNND1-210ENST00000524630 SSH1Q8WYL5 1049 aa11.91□□□□□ -0.5
CTNND1-210ENST00000524630 DDX11Q96FC9 970 aa11.91□□□□□ -0.5
CTNND1-210ENST00000524630 ATAD2Q6PL18 1390 aa11.91□□□□□ -0.5
CTNND1-210ENST00000524630 IQGAP2Q13576 1575 aa11.91□□□□□ -0.5
CTNND1-210ENST00000524630 STIM1Q13586 685 aa11.9□□□□□ -0.5
CTNND1-210ENST00000524630 NESP48681 1621 aa11.9□□□□□ -0.5
CTNND1-210ENST00000524630 MAP3K1Q13233 1512 aa11.9□□□□□ -0.5
CTNND1-210ENST00000524630 SNAPC4Q5SXM2 1469 aa11.9□□□□□ -0.5
CTNND1-210ENST00000524630 MX1P20591 662 aa11.9□□□□□ -0.5
CTNND1-210ENST00000524630 ESCO1Q5FWF5 840 aa11.9□□□□□ -0.5
CTNND1-210ENST00000524630 CCAR1Q8IX12 1150 aaKnown RBP11.9□□□□□ -0.5
CTNND1-210ENST00000524630 GIMAP7Q8NHV1 300 aa11.9□□□□□ -0.5
CTNND1-210ENST00000524630 KRT32Q14532 448 aa11.9□□□□□ -0.5
CTNND1-210ENST00000524630 NUP133Q8WUM0 1156 aa11.9□□□□□ -0.5
CTNND1-210ENST00000524630 KIF18AQ8NI77 898 aa11.9□□□□□ -0.5
CTNND1-210ENST00000524630 RBM27Q9P2N5 1060 aaKnown RBP11.9□□□□□ -0.5
CTNND1-210ENST00000524630 CLIP2Q9UDT6 1046 aa11.9□□□□□ -0.5
CTNND1-210ENST00000524630 BTBD11A6QL63 1104 aa11.9□□□□□ -0.5
CTNND1-210ENST00000524630 FKBP4Q02790 459 aaKnown RBP eCLIP11.9□□□□□ -0.5
CTNND1-210ENST00000524630 IQCEQ6IPM2 695 aa11.9□□□□□ -0.5
CTNND1-210ENST00000524630 KRT18P05783 430 aaKnown RBP11.89□□□□□ -0.51
CTNND1-210ENST00000524630 USP25Q9UHP3 1055 aa11.89□□□□□ -0.51
CTNND1-210ENST00000524630 CDKL5O76039 1030 aa11.89□□□□□ -0.51
CTNND1-210ENST00000524630 MIS18AQ9NYP9 233 aa11.89□□□□□ -0.51
CTNND1-210ENST00000524630 DUSP27Q5VZP5 1158 aa11.89□□□□□ -0.51
CTNND1-210ENST00000524630 THUMPD2Q9BTF0 503 aaKnown RBP11.89□□□□□ -0.51
CTNND1-210ENST00000524630 GOLGA6L7A0A1B0GV03 622 aa11.89□□□□□ -0.51
CTNND1-210ENST00000524630 MRC2Q9UBG0 1479 aa11.89□□□□□ -0.51
CTNND1-210ENST00000524630 KIF2AO00139 706 aaPredicted RBP11.89□□□□□ -0.51
CTNND1-210ENST00000524630 ADCY5O95622 1261 aa11.89□□□□□ -0.51
CTNND1-210ENST00000524630 IKQ13123 557 aaPredicted RBP11.89□□□□□ -0.51
CTNND1-210ENST00000524630 ZRSR2Q15696 482 aaKnown RBP11.89□□□□□ -0.51
CTNND1-210ENST00000524630 TANGO6Q9C0B7 1094 aa11.89□□□□□ -0.51
CTNND1-210ENST00000524630 ARHGEF11O15085 1522 aa11.88□□□□□ -0.51
CTNND1-210ENST00000524630 ABCC5O15440 1437 aa11.88□□□□□ -0.51
CTNND1-210ENST00000524630 IGHDP01880 384 aa11.88□□□□□ -0.51
CTNND1-210ENST00000524630 MCM5P33992 734 aa11.88□□□□□ -0.51
CTNND1-210ENST00000524630 PRPF40BQ6NWY9 871 aaKnown RBP11.88□□□□□ -0.51
CTNND1-210ENST00000524630 CCDC148Q8NFR7 591 aa11.88□□□□□ -0.51
CTNND1-210ENST00000524630 C16orf45Q96MC5 204 aaPredicted RBP11.88□□□□□ -0.51
CTNND1-210ENST00000524630 RAB11FIP3O75154 756 aa11.88□□□□□ -0.51
CTNND1-210ENST00000524630 ZSCAN23Q3MJ62 389 aa11.88□□□□□ -0.51
CTNND1-210ENST00000524630 RBM42Q9BTD8 480 aaKnown RBP11.88□□□□□ -0.51
CTNND1-210ENST00000524630 NOL7Q9UMY1 257 aaKnown RBP11.88□□□□□ -0.51
CTNND1-210ENST00000524630 LRRFIP2Q9Y608 721 aaKnown RBP11.88□□□□□ -0.51
CTNND1-210ENST00000524630 TATP17735 454 aaPredicted RBP11.88□□□□□ -0.51
CTNND1-210ENST00000524630 CABP4P57796 275 aa11.88□□□□□ -0.51
CTNND1-210ENST00000524630 ZSCAN25Q6NSZ9 544 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms