RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 DAXXQ9UER7 740 aaPredicted RBP28.66■■■□□ 2.18
NKX6-3-202ENST00000524115 AATKQ6ZMQ8 1374 aa28.65■■■□□ 2.18
NKX6-3-202ENST00000524115 GLI3P10071 1580 aa28.65■■■□□ 2.18
NKX6-3-202ENST00000524115 ONECUT3O60422 494 aaPredicted RBP28.64■■■□□ 2.18
NKX6-3-202ENST00000524115 SKAP1Q86WV1 359 aa28.64■■■□□ 2.18
NKX6-3-202ENST00000524115 DZIP1LQ8IYY4 767 aaKnown RBP28.64■■■□□ 2.18
NKX6-3-202ENST00000524115 CRYBG1Q9Y4K1 1723 aa28.64■■■□□ 2.18
NKX6-3-202ENST00000524115 TTC21BQ7Z4L5 1316 aa28.64■■■□□ 2.18
NKX6-3-202ENST00000524115 RIPK4P57078 832 aa28.64■■■□□ 2.17
NKX6-3-202ENST00000524115 PLCH1Q4KWH8 1693 aa28.63■■■□□ 2.17
NKX6-3-202ENST00000524115 NWD2Q9ULI1 1742 aa28.63■■■□□ 2.17
NKX6-3-202ENST00000524115 FTSJ3Q8IY81 847 aaKnown RBP28.63■■■□□ 2.17
NKX6-3-202ENST00000524115 SEPT12Q8IYM1 358 aa28.63■■■□□ 2.17
NKX6-3-202ENST00000524115 COL14A1Q05707 1796 aaKnown RBP28.62■■■□□ 2.17
NKX6-3-202ENST00000524115 IPO8O15397 1037 aaKnown RBP28.61■■■□□ 2.17
NKX6-3-202ENST00000524115 VIRMAQ69YN4 1812 aaKnown RBP28.61■■■□□ 2.17
NKX6-3-202ENST00000524115 CPDO75976 1380 aa28.61■■■□□ 2.17
NKX6-3-202ENST00000524115 ALDH1L2Q3SY69 923 aa28.61■■■□□ 2.17
NKX6-3-202ENST00000524115 POLKQ9UBT6 870 aa28.61■■■□□ 2.17
NKX6-3-202ENST00000524115 EXOSC9Q06265 439 aaKnown RBP28.6■■■□□ 2.17
NKX6-3-202ENST00000524115 NBR1Q14596 966 aa28.6■■■□□ 2.17
NKX6-3-202ENST00000524115 SMC4Q9NTJ3 1288 aa28.6■■■□□ 2.17
NKX6-3-202ENST00000524115 KIF16BQ96L93 1317 aa28.6■■■□□ 2.17
NKX6-3-202ENST00000524115 DDX19BQ9UMR2 479 aa28.59■■■□□ 2.17
NKX6-3-202ENST00000524115 SPATA31A5Q5VU36 1347 aa28.59■■■□□ 2.17
NKX6-3-202ENST00000524115 SPATA31A7Q8IWB4 1347 aa28.59■■■□□ 2.17
NKX6-3-202ENST00000524115 STRN4Q9NRL3 753 aa28.58■■■□□ 2.17
NKX6-3-202ENST00000524115 TTC21AQ8NDW8 1320 aa28.58■■■□□ 2.17
NKX6-3-202ENST00000524115 PHRF1Q9P1Y6 1649 aaKnown RBP28.58■■■□□ 2.17
NKX6-3-202ENST00000524115 FAM98CQ17RN3 349 aaKnown RBP28.58■■■□□ 2.16
NKX6-3-202ENST00000524115 RLBP1P12271 317 aa28.57■■■□□ 2.16
NKX6-3-202ENST00000524115 RSPH6AQ9H0K4 717 aa28.57■■■□□ 2.16
NKX6-3-202ENST00000524115 NRKQ7Z2Y5 1582 aa28.55■■■□□ 2.16
NKX6-3-202ENST00000524115 BRPF1P55201 1214 aaPredicted RBP28.55■■■□□ 2.16
NKX6-3-202ENST00000524115 EVA1CP58658 441 aa28.55■■■□□ 2.16
NKX6-3-202ENST00000524115 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.55■■■□□ 2.16
NKX6-3-202ENST00000524115 CHMP4BQ9H444 224 aaKnown RBP28.55■■■□□ 2.16
NKX6-3-202ENST00000524115 MON2Q7Z3U7 1717 aa28.55■■■□□ 2.16
NKX6-3-202ENST00000524115 LMOD3Q0VAK6 560 aa28.54■■■□□ 2.16
NKX6-3-202ENST00000524115 ATF7IPQ6VMQ6 1270 aa28.54■■■□□ 2.16
NKX6-3-202ENST00000524115 TSR2Q969E8 191 aaKnown RBP28.54■■■□□ 2.16
NKX6-3-202ENST00000524115 NRAPQ86VF7 1730 aa28.54■■■□□ 2.16
NKX6-3-202ENST00000524115 A0A0G2JS52 829 aa28.54■■■□□ 2.16
NKX6-3-202ENST00000524115 NFE2L2Q16236 605 aa28.54■■■□□ 2.16
NKX6-3-202ENST00000524115 BCL2L13Q9BXK5 485 aa28.54■■■□□ 2.16
NKX6-3-202ENST00000524115 PCDHB15Q9Y5E8 787 aa28.54■■■□□ 2.16
NKX6-3-202ENST00000524115 COG3Q96JB2 828 aa28.53■■■□□ 2.16
NKX6-3-202ENST00000524115 SPATA31A1Q5TZJ5 1347 aa28.52■■■□□ 2.16
NKX6-3-202ENST00000524115 ZBTB7CA1YPR0 619 aa28.52■■■□□ 2.16
NKX6-3-202ENST00000524115 PRKAR2BP31323 418 aa28.51■■■□□ 2.16
NKX6-3-202ENST00000524115 DEKP35659 375 aaKnown RBP28.51■■■□□ 2.15
NKX6-3-202ENST00000524115 HDAC1Q13547 482 aaPredicted RBP28.51■■■□□ 2.15
NKX6-3-202ENST00000524115 KRT27Q7Z3Y8 459 aa28.51■■■□□ 2.15
NKX6-3-202ENST00000524115 SSH1Q8WYL5 1049 aa28.51■■■□□ 2.15
NKX6-3-202ENST00000524115 AKAP12Q02952 1782 aa28.5■■■□□ 2.15
NKX6-3-202ENST00000524115 KCNH5Q8NCM2 988 aa28.5■■■□□ 2.15
NKX6-3-202ENST00000524115 SLIT3O75094 1523 aa28.5■■■□□ 2.15
NKX6-3-202ENST00000524115 CAMTA1Q9Y6Y1 1673 aa28.5■■■□□ 2.15
NKX6-3-202ENST00000524115 LARP1Q6PKG0 1096 aaKnown RBP28.49■■■□□ 2.15
NKX6-3-202ENST00000524115 ZRANB1Q9UGI0 708 aa28.49■■■□□ 2.15
NKX6-3-202ENST00000524115 MAP2P11137 1827 aaKnown RBP28.49■■■□□ 2.15
NKX6-3-202ENST00000524115 PIK3C2AO00443 1686 aa28.48■■■□□ 2.15
NKX6-3-202ENST00000524115 IL13P35225 146 aa28.48■■■□□ 2.15
NKX6-3-202ENST00000524115 SOX12O15370 315 aa28.48■■■□□ 2.15
NKX6-3-202ENST00000524115 TRIM27P14373 513 aa28.48■■■□□ 2.15
NKX6-3-202ENST00000524115 GNAI1P63096 354 aa28.48■■■□□ 2.15
NKX6-3-202ENST00000524115 NME9Q86XW9 330 aa28.48■■■□□ 2.15
NKX6-3-202ENST00000524115 UPF2Q9HAU5 1272 aaKnown RBP28.48■■■□□ 2.15
NKX6-3-202ENST00000524115 PDZRN3Q9UPQ7 1066 aa28.48■■■□□ 2.15
NKX6-3-202ENST00000524115 ARHGEF25Q86VW2 580 aa28.46■■■□□ 2.15
NKX6-3-202ENST00000524115 CCDC125Q86Z20 511 aa28.46■■■□□ 2.15
NKX6-3-202ENST00000524115 IFT57Q9NWB7 429 aa28.46■■■□□ 2.15
NKX6-3-202ENST00000524115 EP400Q96L91 3159 aa28.45■■■□□ 2.14
NKX6-3-202ENST00000524115 ARHGAP45Q92619 1136 aa28.45■■■□□ 2.14
NKX6-3-202ENST00000524115 NOB1Q9ULX3 412 aaKnown RBP28.45■■■□□ 2.14
NKX6-3-202ENST00000524115 TNNQ9UQP3 1299 aa28.45■■■□□ 2.14
NKX6-3-202ENST00000524115 USP31Q70CQ4 1352 aa28.45■■■□□ 2.14
NKX6-3-202ENST00000524115 AXIN2Q9Y2T1 843 aa28.42■■■□□ 2.14
NKX6-3-202ENST00000524115 BECN1Q14457 450 aa28.42■■■□□ 2.14
NKX6-3-202ENST00000524115 BARGINQ6ZT62 677 aa28.42■■■□□ 2.14
NKX6-3-202ENST00000524115 ITPRIPQ8IWB1 547 aa28.42■■■□□ 2.14
NKX6-3-202ENST00000524115 LMO7Q8WWI1 1683 aa28.41■■■□□ 2.14
NKX6-3-202ENST00000524115 COL5A2P05997 1499 aaPredicted RBP28.41■■■□□ 2.14
NKX6-3-202ENST00000524115 LAS1LQ9Y4W2 734 aaKnown RBP28.4■■■□□ 2.14
NKX6-3-202ENST00000524115 EMILIN1Q9Y6C2 1016 aa28.38■■■□□ 2.13
NKX6-3-202ENST00000524115 THRAP3Q9Y2W1 955 aaKnown RBP28.38■■■□□ 2.13
NKX6-3-202ENST00000524115 ZNF853P0CG23 659 aa28.37■■■□□ 2.13
NKX6-3-202ENST00000524115 ZBTB40Q9NUA8 1239 aa28.37■■■□□ 2.13
NKX6-3-202ENST00000524115 FAM182BQ5T319 152 aa28.36■■■□□ 2.13
NKX6-3-202ENST00000524115 SMC5Q8IY18 1101 aa28.36■■■□□ 2.13
NKX6-3-202ENST00000524115 BRWD3Q6RI45 1802 aa28.35■■■□□ 2.13
NKX6-3-202ENST00000524115 TMEM57Q8N5G2 664 aa28.35■■■□□ 2.13
NKX6-3-202ENST00000524115 CRB1P82279 1406 aa28.35■■■□□ 2.13
NKX6-3-202ENST00000524115 NFAT5O94916 1531 aa28.34■■■□□ 2.13
NKX6-3-202ENST00000524115 TOM1L2Q6ZVM7 507 aa28.34■■■□□ 2.13
NKX6-3-202ENST00000524115 HMOX1P09601 288 aa28.33■■■□□ 2.13
NKX6-3-202ENST00000524115 PHACTR3Q96KR7 559 aa28.33■■■□□ 2.13
NKX6-3-202ENST00000524115 CFAP44Q96MT7 982 aa28.33■■■□□ 2.13
NKX6-3-202ENST00000524115 THSD7AQ9UPZ6 1657 aa28.33■■■□□ 2.13
NKX6-3-202ENST00000524115 WDR17Q8IZU2 1322 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms