RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 NSD3Q9BZ95 1437 aa23.31■■□□□ 1.32
SPIDR-221ENST00000523814 MYOM1P52179 1685 aa23.3■■□□□ 1.32
SPIDR-221ENST00000523814 SLC27A3Q5K4L6 730 aa23.3■■□□□ 1.32
SPIDR-221ENST00000523814 USHBP1Q8N6Y0 703 aa23.3■■□□□ 1.32
SPIDR-221ENST00000523814 RAPGEF4Q8WZA2 1011 aa23.3■■□□□ 1.32
SPIDR-221ENST00000523814 ATF5Q9Y2D1 282 aaPredicted RBP23.3■■□□□ 1.32
SPIDR-221ENST00000523814 KIF20BQ96Q89 1820 aa23.29■■□□□ 1.32
SPIDR-221ENST00000523814 KAT6BQ8WYB5 2073 aa23.28■■□□□ 1.32
SPIDR-221ENST00000523814 SYTL4Q96C24 671 aaPredicted RBP23.28■■□□□ 1.32
SPIDR-221ENST00000523814 MTFR1LQ9H019 292 aa23.28■■□□□ 1.32
SPIDR-221ENST00000523814 TATP17735 454 aaPredicted RBP23.27■■□□□ 1.32
SPIDR-221ENST00000523814 EMILIN1Q9Y6C2 1016 aa23.27■■□□□ 1.32
SPIDR-221ENST00000523814 PAPPAQ13219 1627 aa23.26■■□□□ 1.31
SPIDR-221ENST00000523814 ZNF827Q17R98 1081 aa23.26■■□□□ 1.31
SPIDR-221ENST00000523814 AKT1S1Q96B36 256 aa23.26■■□□□ 1.31
SPIDR-221ENST00000523814 NSD2O96028 1365 aa23.26■■□□□ 1.31
SPIDR-221ENST00000523814 EIF4G2P78344 907 aaKnown RBP eCLIP23.25■■□□□ 1.31
SPIDR-221ENST00000523814 SGIP1Q9BQI5 828 aa23.25■■□□□ 1.31
SPIDR-221ENST00000523814 SHANK3Q9BYB0 1731 aa23.25■■□□□ 1.31
SPIDR-221ENST00000523814 CCER1Q8TC90 406 aaPredicted RBP23.23■■□□□ 1.31
SPIDR-221ENST00000523814 WASHC2AQ641Q2 1341 aa23.23■■□□□ 1.31
SPIDR-221ENST00000523814 DCAF8L1A6NGE4 600 aa23.22■■□□□ 1.31
SPIDR-221ENST00000523814 HSPA5P11021 654 aaKnown RBP23.22■■□□□ 1.31
SPIDR-221ENST00000523814 PPM1GO15355 546 aaPredicted RBP23.21■■□□□ 1.31
SPIDR-221ENST00000523814 POLR3GLQ9BT43 218 aa23.21■■□□□ 1.31
SPIDR-221ENST00000523814 PCDH11XQ9BZA7 1347 aa23.21■■□□□ 1.31
SPIDR-221ENST00000523814 PCDH11YQ9BZA8 1340 aa23.21■■□□□ 1.31
SPIDR-221ENST00000523814 KCNQ4P56696 695 aa23.2■■□□□ 1.3
SPIDR-221ENST00000523814 POLKQ9UBT6 870 aa23.2■■□□□ 1.3
SPIDR-221ENST00000523814 DOT1LQ8TEK3 1739 aa23.19■■□□□ 1.3
SPIDR-221ENST00000523814 SLC16A10Q8TF71 515 aa23.19■■□□□ 1.3
SPIDR-221ENST00000523814 NCAPD2Q15021 1401 aa23.18■■□□□ 1.3
SPIDR-221ENST00000523814 CYP27B1O15528 508 aa23.18■■□□□ 1.3
SPIDR-221ENST00000523814 SYT17Q9BSW7 474 aa23.18■■□□□ 1.3
SPIDR-221ENST00000523814 FHDC1Q9C0D6 1143 aaPredicted RBP23.18■■□□□ 1.3
SPIDR-221ENST00000523814 ARXQ96QS3 562 aa23.17■■□□□ 1.3
SPIDR-221ENST00000523814 TFCP2L1Q9NZI6 479 aa23.17■■□□□ 1.3
SPIDR-221ENST00000523814 CCNL1Q9UK58 526 aaPredicted RBP23.17■■□□□ 1.3
SPIDR-221ENST00000523814 EYA1Q99502 592 aa23.16■■□□□ 1.3
SPIDR-221ENST00000523814 PANK3Q9H999 370 aa23.16■■□□□ 1.3
SPIDR-221ENST00000523814 LY75O60449 1722 aa23.16■■□□□ 1.3
SPIDR-221ENST00000523814 PNPLA7Q6ZV29 1317 aa23.15■■□□□ 1.3
SPIDR-221ENST00000523814 ANKRD26Q9UPS8 1709 aa23.15■■□□□ 1.3
SPIDR-221ENST00000523814 YY1P25490 414 aa23.14■■□□□ 1.29
SPIDR-221ENST00000523814 NKX1-1Q15270 411 aaPredicted RBP23.14■■□□□ 1.29
SPIDR-221ENST00000523814 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.14■■□□□ 1.296e-8■■■■□ 20.6
SPIDR-221ENST00000523814 SPG7Q9UQ90 795 aa23.13■■□□□ 1.29
SPIDR-221ENST00000523814 MAP2P11137 1827 aaKnown RBP23.12■■□□□ 1.29
SPIDR-221ENST00000523814 HMGB2P26583 209 aaKnown RBP23.12■■□□□ 1.29
SPIDR-221ENST00000523814 TNNT2P45379 298 aaPredicted RBP23.12■■□□□ 1.29
SPIDR-221ENST00000523814 MPRIPQ6WCQ1 1025 aa23.12■■□□□ 1.29
SPIDR-221ENST00000523814 QSER1Q2KHR3 1735 aa23.11■■□□□ 1.29
SPIDR-221ENST00000523814 MAP3K5Q99683 1374 aa23.11■■□□□ 1.29
SPIDR-221ENST00000523814 PKD1L3Q7Z443 1732 aa23.09■■□□□ 1.29
SPIDR-221ENST00000523814 EIF4A2Q14240 407 aaKnown RBP23.09■■□□□ 1.29
SPIDR-221ENST00000523814 POLD1P28340 1107 aa23.08■■□□□ 1.29
SPIDR-221ENST00000523814 SMARCC1Q92922 1105 aaPredicted RBP23.08■■□□□ 1.29
SPIDR-221ENST00000523814 PALLDQ8WX93 1383 aa23.07■■□□□ 1.28
SPIDR-221ENST00000523814 COL23A1Q86Y22 540 aaPredicted RBP23.07■■□□□ 1.28
SPIDR-221ENST00000523814 PIGBQ92521 554 aa23.07■■□□□ 1.28
SPIDR-221ENST00000523814 IFNL2Q8IZJ0 200 aa23.05■■□□□ 1.28
SPIDR-221ENST00000523814 COL24A1Q17RW2 1714 aa23.05■■□□□ 1.28
SPIDR-221ENST00000523814 PLEKHG2Q9H7P9 1386 aa23.04■■□□□ 1.28
SPIDR-221ENST00000523814 PHKG2P15735 406 aa23.04■■□□□ 1.28
SPIDR-221ENST00000523814 TUBGCP6Q96RT7 1819 aa23.03■■□□□ 1.28
SPIDR-221ENST00000523814 TOGARAM1Q9Y4F4 1720 aa23.03■■□□□ 1.28
SPIDR-221ENST00000523814 MORC1Q86VD1 984 aa23.03■■□□□ 1.28
SPIDR-221ENST00000523814 IGSF1Q8N6C5 1336 aa23.03■■□□□ 1.28
SPIDR-221ENST00000523814 MSH5O43196 834 aa23.02■■□□□ 1.28
SPIDR-221ENST00000523814 FLAD1Q8NFF5 587 aa23.02■■□□□ 1.28
SPIDR-221ENST00000523814 KNSTRNQ9Y448 316 aa23.02■■□□□ 1.28
SPIDR-221ENST00000523814 ITGB4P16144 1822 aa23.01■■□□□ 1.27
SPIDR-221ENST00000523814 TMOD3Q9NYL9 352 aa23■■□□□ 1.27
SPIDR-221ENST00000523814 C5P01031 1676 aa22.99■■□□□ 1.27
SPIDR-221ENST00000523814 LOC102724428A0A0B4J2F2 783 aa22.98■■□□□ 1.27
SPIDR-221ENST00000523814 SIK1P57059 783 aa22.98■■□□□ 1.27
SPIDR-221ENST00000523814 ASAP1Q9ULH1 1129 aa22.98■■□□□ 1.27
SPIDR-221ENST00000523814 PLEKHO1Q53GL0 409 aaPredicted RBP22.96■■□□□ 1.27
SPIDR-221ENST00000523814 AMER1Q5JTC6 1135 aaPredicted RBP22.96■■□□□ 1.27
SPIDR-221ENST00000523814 KLHL34Q8N239 644 aa22.96■■□□□ 1.27
SPIDR-221ENST00000523814 KIF7Q2M1P5 1343 aa22.96■■□□□ 1.27
SPIDR-221ENST00000523814 TAF1LQ8IZX4 1826 aa22.96■■□□□ 1.27
SPIDR-221ENST00000523814 ERVV-2B6SEH9 535 aa22.95■■□□□ 1.26
SPIDR-221ENST00000523814 AMOTQ4VCS5 1084 aa22.95■■□□□ 1.26
SPIDR-221ENST00000523814 AK7Q96M32 723 aa22.95■■□□□ 1.26
SPIDR-221ENST00000523814 ATG3Q9NT62 314 aa22.95■■□□□ 1.26
SPIDR-221ENST00000523814 HSP90AB1P08238 724 aaKnown RBP22.94■■□□□ 1.26
SPIDR-221ENST00000523814 GPR162Q16538 588 aa22.94■■□□□ 1.26
SPIDR-221ENST00000523814 MSL1Q68DK7 614 aa22.94■■□□□ 1.26
SPIDR-221ENST00000523814 DCAF5Q96JK2 942 aa22.94■■□□□ 1.26
SPIDR-221ENST00000523814 UTRNP46939 3433 aa22.93■■□□□ 1.26
SPIDR-221ENST00000523814 AMIGO3Q86WK7 504 aa22.93■■□□□ 1.26
SPIDR-221ENST00000523814 LINC00116Q8NCU8 138 aa22.93■■□□□ 1.26
SPIDR-221ENST00000523814 NLGN2Q8NFZ4 835 aa22.93■■□□□ 1.26
SPIDR-221ENST00000523814 C4BP0C0L5 1744 aa22.93■■□□□ 1.26
SPIDR-221ENST00000523814 ITPK1Q13572 414 aa22.92■■□□□ 1.26
SPIDR-221ENST00000523814 PER1O15534 1290 aaPredicted RBP22.91■■□□□ 1.26
SPIDR-221ENST00000523814 IL13P35225 146 aa22.91■■□□□ 1.26
SPIDR-221ENST00000523814 ATP6V1AP38606 617 aa22.91■■□□□ 1.26
SPIDR-221ENST00000523814 AEBP1Q8IUX7 1158 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms